RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 DAP3P51398 398 aaKnown RBP4.09□□□□□ -1.75
NPHP3-206ENST00000474871 SSR4P51571 173 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 PSMA6P60900 246 aaKnown RBP4.09□□□□□ -1.75
NPHP3-206ENST00000474871 ENDOGQ14249 297 aaKnown RBP4.09□□□□□ -1.75
NPHP3-206ENST00000474871 BVES-AS1Q5T3Y7 98 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 DOK3Q7L591 496 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 FAM90A1Q86YD7 464 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 CNEP1R1Q8N9A8 125 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 OR4C3Q8NH37 302 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 CDX2Q99626 313 aaPredicted RBP4.09□□□□□ -1.75
NPHP3-206ENST00000474871 ISG20L2Q9H9L3 353 aaKnown RBP4.09□□□□□ -1.75
NPHP3-206ENST00000474871 TECRQ9NZ01 308 aaKnown RBP4.09□□□□□ -1.75
NPHP3-206ENST00000474871 ABRACLQ9P1F3 81 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 TAAR3PQ9P1P4 343 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 TCF19Q9Y242 345 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 MEGF11A6BM72 1044 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 FTH1P19P0C7X4 201 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 LIMS3P0CW19 117 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 LIMS4P0CW20 117 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 SLC25A6P12236 298 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 HIST1H1TP22492 207 aaPredicted RBP4.09□□□□□ -1.75
NPHP3-206ENST00000474871 CD70P32970 193 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 XCR1P46094 333 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 CDK3Q00526 305 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 TIAL1Q01085 375 aaKnown RBP eCLIP4.09□□□□□ -1.75
NPHP3-206ENST00000474871 FOXC1Q12948 553 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 LYPD4Q6UWN0 246 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 ZNF709Q8N972 641 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 OR10G2Q8NGC3 310 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 OR13G1Q8NGZ3 307 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 ZNF417Q8TAU3 575 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 RNF166Q96A37 237 aaPredicted RBP4.09□□□□□ -1.75
NPHP3-206ENST00000474871 GMPPAQ96IJ6 420 aaPredicted RBP4.09□□□□□ -1.75
NPHP3-206ENST00000474871 CABLES2Q9BTV7 478 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 LINC00597Q9H2U6 94 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 TVP23BQ9NYZ1 205 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 TAAR2Q9P1P5 351 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 CCL26Q9Y258 94 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 V9GYY9 64 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 SCN8AQ9UQD0 1980 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 NUP205Q92621 2012 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 TRBV24-1A0A075B6N3 115 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 A0A1B0GVT2 93 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 A0A1W2PPK0 400 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 C5orf67F2Z3F1 127 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 PYCARD-AS1I3L0S3 204 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 CSN2P05814 226 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 CHRM4P08173 479 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 ERGP11308 486 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 AADACP22760 399 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 COL8A1P27658 744 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 NMUP48645 174 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 HINT1P49773 126 aaPredicted RBP4.09□□□□□ -1.75
NPHP3-206ENST00000474871 SLC38A11Q08AI6 406 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 CATR1Q13166 79 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 OR4C11Q6IEV9 310 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 TEX29Q8N6K0 151 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 OR13A1Q8NGR1 328 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 SDSLQ96GA7 329 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 C2orf48Q96LS8 159 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 TIMP4Q99727 224 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 TAF9BQ9HBM6 251 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 BCL2L10Q9HD36 194 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 PRO0461Q9UI25 63 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 TRAPPC2LQ9UL33 140 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 OR1A2Q9Y585 309 aa4.09□□□□□ -1.75
NPHP3-206ENST00000474871 CXorf51AA0A1B0GTR3 108 aa4.09□□□□□ -1.76
NPHP3-206ENST00000474871 SH2D7A6NKC9 451 aaPredicted RBP4.09□□□□□ -1.76
NPHP3-206ENST00000474871 HLA-DPB1P04440 258 aa4.09□□□□□ -1.76
NPHP3-206ENST00000474871 AMY2AP04746 511 aa4.09□□□□□ -1.76
NPHP3-206ENST00000474871 AMY2BP19961 511 aa4.09□□□□□ -1.76
NPHP3-206ENST00000474871 LOXP28300 417 aaPredicted RBP4.09□□□□□ -1.76
NPHP3-206ENST00000474871 DAPP51397 102 aa4.09□□□□□ -1.76
NPHP3-206ENST00000474871 Q0VG73 95 aa4.09□□□□□ -1.76
NPHP3-206ENST00000474871 PLGLAQ15195 96 aa4.09□□□□□ -1.76
NPHP3-206ENST00000474871 SYPL1Q16563 259 aa4.09□□□□□ -1.76
NPHP3-206ENST00000474871 TP53I3Q53FA7 332 aa4.09□□□□□ -1.76
NPHP3-206ENST00000474871 TMEM207Q6UWW9 146 aa4.09□□□□□ -1.76
NPHP3-206ENST00000474871 TSEN54Q7Z6J9 526 aaKnown RBP4.09□□□□□ -1.76
NPHP3-206ENST00000474871 OR4N5Q8IXE1 308 aa4.09□□□□□ -1.76
NPHP3-206ENST00000474871 LRRC58Q96CX6 371 aa4.09□□□□□ -1.76
NPHP3-206ENST00000474871 SMIM14Q96QK8 99 aa4.09□□□□□ -1.76
NPHP3-206ENST00000474871 TPSG1Q9NRR2 321 aa4.09□□□□□ -1.76
NPHP3-206ENST00000474871 F5P12259 2224 aa4.08□□□□□ -1.76
NPHP3-206ENST00000474871 LRRC30A6NM36 301 aa4.08□□□□□ -1.76
NPHP3-206ENST00000474871 A8MT66 165 aa4.08□□□□□ -1.76
NPHP3-206ENST00000474871 PRSS56P0CW18 603 aa4.08□□□□□ -1.76
NPHP3-206ENST00000474871 IL3RAP26951 378 aa4.08□□□□□ -1.76
NPHP3-206ENST00000474871 PLA2G5P39877 138 aa4.08□□□□□ -1.76
NPHP3-206ENST00000474871 SRYQ05066 204 aa4.08□□□□□ -1.76
NPHP3-206ENST00000474871 HMGN3Q15651 99 aa4.08□□□□□ -1.76
NPHP3-206ENST00000474871 TECRLQ5HYJ1 363 aa4.08□□□□□ -1.76
NPHP3-206ENST00000474871 CBLL1Q75N03 491 aa4.08□□□□□ -1.76
NPHP3-206ENST00000474871 SLC25A40Q8TBP6 338 aa4.08□□□□□ -1.76
NPHP3-206ENST00000474871 TMEM54Q969K7 222 aa4.08□□□□□ -1.76
NPHP3-206ENST00000474871 HES7Q9BYE0 225 aa4.08□□□□□ -1.76
NPHP3-206ENST00000474871 CHIAQ9BZP6 476 aa4.08□□□□□ -1.76
NPHP3-206ENST00000474871 TMEM126AQ9H061 195 aa4.08□□□□□ -1.76
NPHP3-206ENST00000474871 PIKFYVEQ9Y2I7 2098 aa4.08□□□□□ -1.76
NPHP3-206ENST00000474871 CACNA1GO43497 2377 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms