RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 MOB3BQ86TA1 216 aa13.5□□□□□ -0.25
SCAF11-206ENST00000474828 OR8H1Q8NGG4 311 aa13.5□□□□□ -0.25
SCAF11-206ENST00000474828 OR2T10Q8NGZ9 312 aa13.5□□□□□ -0.25
SCAF11-206ENST00000474828 CAPSLQ8WWF8 208 aa13.5□□□□□ -0.25
SCAF11-206ENST00000474828 GIMAP1Q8WWP7 306 aa13.5□□□□□ -0.25
SCAF11-206ENST00000474828 C5orf30Q96GV9 206 aa13.5□□□□□ -0.25
SCAF11-206ENST00000474828 AKR1E2Q96JD6 320 aa13.5□□□□□ -0.25
SCAF11-206ENST00000474828 GINS4Q9BRT9 223 aa13.5□□□□□ -0.25
SCAF11-206ENST00000474828 SLC25A33Q9BSK2 321 aa13.5□□□□□ -0.25
SCAF11-206ENST00000474828 MRPL20Q9BYC9 149 aaKnown RBP13.5□□□□□ -0.25
SCAF11-206ENST00000474828 MMP27Q9H306 513 aa13.5□□□□□ -0.25
SCAF11-206ENST00000474828 BEX1Q9HBH7 125 aa13.5□□□□□ -0.25
SCAF11-206ENST00000474828 OR5H14A6NHG9 310 aa13.49□□□□□ -0.25
SCAF11-206ENST00000474828 FAM25AB3EWG3 89 aa13.49□□□□□ -0.25
SCAF11-206ENST00000474828 FAM25CB3EWG5 89 aa13.49□□□□□ -0.25
SCAF11-206ENST00000474828 FAM25GB3EWG6 89 aa13.49□□□□□ -0.25
SCAF11-206ENST00000474828 MOSP00540 346 aa13.49□□□□□ -0.25
SCAF11-206ENST00000474828 IGLV2-14P01704 120 aa13.49□□□□□ -0.25
SCAF11-206ENST00000474828 OR8U9P0C7N5 309 aa13.49□□□□□ -0.25
SCAF11-206ENST00000474828 MRPS10P82664 201 aaKnown RBP13.49□□□□□ -0.25
SCAF11-206ENST00000474828 OR4C13Q8NGP0 309 aa13.49□□□□□ -0.25
SCAF11-206ENST00000474828 OR8U1Q8NH10 309 aa13.49□□□□□ -0.25
SCAF11-206ENST00000474828 MCFD2Q8NI22 146 aa13.49□□□□□ -0.25
SCAF11-206ENST00000474828 WIPF2Q8TF74 440 aaPredicted RBP13.49□□□□□ -0.25
SCAF11-206ENST00000474828 NECAP2Q9NVZ3 263 aa13.49□□□□□ -0.25
SCAF11-206ENST00000474828 SDHAF2Q9NX18 166 aa13.49□□□□□ -0.25
SCAF11-206ENST00000474828 ZNF221Q9UK13 617 aa13.49□□□□□ -0.25
SCAF11-206ENST00000474828 MRPS7Q9Y2R9 242 aaKnown RBP13.49□□□□□ -0.25
SCAF11-206ENST00000474828 H0YJW9 148 aa13.48□□□□□ -0.25
SCAF11-206ENST00000474828 RGS5O15539 181 aa13.48□□□□□ -0.25
SCAF11-206ENST00000474828 SLC22A5O76082 557 aa13.48□□□□□ -0.25
SCAF11-206ENST00000474828 OR5H8P0DN80 308 aa13.48□□□□□ -0.25
SCAF11-206ENST00000474828 TNFSF8P32971 234 aa13.48□□□□□ -0.25
SCAF11-206ENST00000474828 MC5RP33032 325 aa13.48□□□□□ -0.25
SCAF11-206ENST00000474828 TAS2R46P59540 309 aa13.48□□□□□ -0.25
SCAF11-206ENST00000474828 BLCAPP62952 87 aa13.48□□□□□ -0.25
SCAF11-206ENST00000474828 EIF4EBP1Q13541 118 aaPredicted RBP13.48□□□□□ -0.25
SCAF11-206ENST00000474828 DYRK1AQ13627 763 aa13.48□□□□□ -0.25
SCAF11-206ENST00000474828 CDK10Q15131 360 aa13.48□□□□□ -0.25
SCAF11-206ENST00000474828 C5orf56Q8N8D9 126 aa13.48□□□□□ -0.25
SCAF11-206ENST00000474828 ZNF747Q9BV97 191 aa13.48□□□□□ -0.25
SCAF11-206ENST00000474828 SERTAD4Q9NUC0 356 aa13.48□□□□□ -0.25
SCAF11-206ENST00000474828 MTFP1Q9UDX5 166 aa13.48□□□□□ -0.25
SCAF11-206ENST00000474828 ZNF107Q9UII5 783 aaPredicted RBP13.48□□□□□ -0.25
SCAF11-206ENST00000474828 RNF150Q9ULK6 438 aa13.48□□□□□ -0.25
SCAF11-206ENST00000474828 RBMX2Q9Y388 322 aaKnown RBP13.48□□□□□ -0.25
SCAF11-206ENST00000474828 MOB4Q9Y3A3 225 aa13.48□□□□□ -0.25
SCAF11-206ENST00000474828 IGHV3-72A0A0B4J1Y9 119 aa13.47□□□□□ -0.25
SCAF11-206ENST00000474828 IGKV1D-13A0A0B4J2D9 117 aa13.47□□□□□ -0.25
SCAF11-206ENST00000474828 CCDC160A6NGH7 325 aa13.47□□□□□ -0.25
SCAF11-206ENST00000474828 GABARAPH6UMI1 98 aa13.47□□□□□ -0.25
SCAF11-206ENST00000474828 IGKV1-13P0DP09 117 aa13.47□□□□□ -0.25
SCAF11-206ENST00000474828 TMEM11P17152 192 aa13.47□□□□□ -0.25
SCAF11-206ENST00000474828 NFYAP23511 347 aaPredicted RBP13.47□□□□□ -0.25
SCAF11-206ENST00000474828 RCVRNP35243 200 aa13.47□□□□□ -0.25
SCAF11-206ENST00000474828 GPR12P47775 334 aa13.47□□□□□ -0.25
SCAF11-206ENST00000474828 ARPC4P59998 168 aa13.47□□□□□ -0.25
SCAF11-206ENST00000474828 SSBP1Q04837 148 aaKnown RBP13.47□□□□□ -0.25
SCAF11-206ENST00000474828 PYHIN1Q6K0P9 492 aa13.47□□□□□ -0.25
SCAF11-206ENST00000474828 SNX29P2Q8IUI4 249 aa13.47□□□□□ -0.25
SCAF11-206ENST00000474828 FAM71E2Q8N5Q1 922 aa13.47□□□□□ -0.25
SCAF11-206ENST00000474828 ZNF645Q8N7E2 425 aa13.47□□□□□ -0.25
SCAF11-206ENST00000474828 ZNF383Q8NA42 475 aa13.47□□□□□ -0.25
SCAF11-206ENST00000474828 DDB2Q92466 427 aa13.47□□□□□ -0.25
SCAF11-206ENST00000474828 RNF5Q99942 180 aa13.47□□□□□ -0.25
SCAF11-206ENST00000474828 PRSS22Q9GZN4 317 aa13.47□□□□□ -0.25
SCAF11-206ENST00000474828 WNT10AQ9GZT5 417 aa13.47□□□□□ -0.25
SCAF11-206ENST00000474828 OR2D2Q9H210 308 aa13.47□□□□□ -0.25
SCAF11-206ENST00000474828 IFT46Q9NQC8 304 aa13.47□□□□□ -0.25
SCAF11-206ENST00000474828 MEIS3P1A6NDR6 274 aa13.46□□□□□ -0.25
SCAF11-206ENST00000474828 LUMP51884 338 aaPredicted RBP13.46□□□□□ -0.25
SCAF11-206ENST00000474828 TAGLNQ01995 201 aaKnown RBP13.46□□□□□ -0.25
SCAF11-206ENST00000474828 VAX1Q5SQQ9 334 aa13.46□□□□□ -0.25
SCAF11-206ENST00000474828 Q6ZS46 218 aa13.46□□□□□ -0.25
SCAF11-206ENST00000474828 Q8N9W7 124 aa13.46□□□□□ -0.25
SCAF11-206ENST00000474828 NPBQ8NG41 125 aa13.46□□□□□ -0.25
SCAF11-206ENST00000474828 OR52I2Q8NH67 350 aa13.46□□□□□ -0.25
SCAF11-206ENST00000474828 SMIM4Q8WVI0 70 aa13.46□□□□□ -0.25
SCAF11-206ENST00000474828 WFDC12Q8WWY7 111 aa13.46□□□□□ -0.25
SCAF11-206ENST00000474828 DCUN1D5Q9BTE7 237 aa13.46□□□□□ -0.25
SCAF11-206ENST00000474828 C6orf62Q9GZU0 229 aaPredicted RBP13.46□□□□□ -0.25
SCAF11-206ENST00000474828 RNF114Q9Y508 228 aa13.46□□□□□ -0.25
SCAF11-206ENST00000474828 A6NHS1 94 aa13.45□□□□□ -0.26
SCAF11-206ENST00000474828 GSTZ1O43708 216 aaPredicted RBP13.45□□□□□ -0.26
SCAF11-206ENST00000474828 RBBP9O75884 186 aa13.45□□□□□ -0.26
SCAF11-206ENST00000474828 NDUFA3O95167 84 aa13.45□□□□□ -0.26
SCAF11-206ENST00000474828 PPYP01298 95 aa13.45□□□□□ -0.26
SCAF11-206ENST00000474828 TBPP20226 339 aa13.45□□□□□ -0.26
SCAF11-206ENST00000474828 FCGR2CP31995 323 aa13.45□□□□□ -0.26
SCAF11-206ENST00000474828 DUTP33316 252 aaKnown RBP13.45□□□□□ -0.26
SCAF11-206ENST00000474828 ACTBP60709 375 aa13.45□□□□□ -0.26
SCAF11-206ENST00000474828 C12orf54Q6X4T0 127 aa13.45□□□□□ -0.26
SCAF11-206ENST00000474828 DIRAS2Q96HU8 199 aa13.45□□□□□ -0.26
SCAF11-206ENST00000474828 LIN7CQ9NUP9 197 aaKnown RBP13.45□□□□□ -0.26
SCAF11-206ENST00000474828 KLK11Q9UBX7 282 aa13.45□□□□□ -0.26
SCAF11-206ENST00000474828 CD74P04233 296 aa13.44□□□□□ -0.26
SCAF11-206ENST00000474828 AADACP22760 399 aa13.44□□□□□ -0.26
SCAF11-206ENST00000474828 PTBP1P26599 531 aaKnown RBP eCLIP13.44□□□□□ -0.263e-7■■■■■ 46.2
SCAF11-206ENST00000474828 ETV6P41212 452 aa13.44□□□□□ -0.26
SCAF11-206ENST00000474828 RFX2P48378 723 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms