RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 LOC105371267A0A1B0GV96 52 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 A0A1B0GW64 132 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 IGSF23A1L1A6 192 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 MBD3L4A6NDZ8 208 aaPredicted RBP4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 MBD3L3A6NE82 208 aaPredicted RBP4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 MBD3L5A6NJ08 208 aaPredicted RBP4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 OR5H1A6NKK0 313 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 VSTM5A8MXK1 200 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 MKRN2OSH3BPM6 223 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 M0R036 132 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 SYNGR2O43760 224 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 CHST1O43916 411 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 RBMXL2O75526 392 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 IGLV1-44P01699 117 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 PSG2P11465 335 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 OMGP23515 440 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 LMO1P25800 156 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 SNCAP37840 140 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 KIR2DS2P43631 304 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 PPT1P50897 306 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 FABP6P51161 128 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 KLF3P57682 345 aaPredicted RBP4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 ERVK-16P61578 105 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 RHEBQ15382 184 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 MST1LQ2TV78 715 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 KRBOX4Q5JUW0 171 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 TIMM23BQ5SRD1 257 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 ZNF66Q6ZN08 573 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 NAV2Q8IVL1 2488 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 PUSL1Q8N0Z8 303 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 WDR31Q8NA23 367 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 DMBX1Q8NFW5 382 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 OR8U1Q8NH10 309 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 MBD3L2Q8NHZ7 208 aaPredicted RBP4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 PLPPR1Q8TBJ4 325 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 LRRC29Q8WV35 223 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 LURAP1Q96LR2 239 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 AIFM2Q9BRQ8 373 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 SFXN3Q9BWM7 321 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 MAGT1Q9H0U3 335 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 TLNRD1Q9H1K6 362 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 SLC35B3Q9H1N7 401 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 OR2D2Q9H210 308 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 TMEM231Q9H6L2 316 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 HES4Q9HCC6 221 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 COA4Q9NYJ1 87 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 CACNG5Q9UF02 275 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 MMP24Q9Y5R2 645 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 DMRT1Q9Y5R6 373 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 IGHV2OR16-5A0A0B4J2B6 119 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 M0R1B8 84 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 DNASE2O00115 360 aaPredicted RBP4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 NUPL2O15504 423 aaKnown RBP4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 SOX15O60248 233 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 AGFG2O95081 481 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 MBP02144 154 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 CD5P06127 495 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 HEXAP06865 529 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 IRF2P14316 349 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 GZMHP20718 246 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 ATP6V0CP27449 155 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 TIMP3P35625 211 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 TAGLN2P37802 199 aaKnown RBP4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 MPV17P39210 176 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 OR3A1P47881 315 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 DYNLT3P51808 116 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 RAB5BP61020 215 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 ERVS71-1P61550 626 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 NHLH2Q02577 135 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 DAZAP2Q15038 168 aaPredicted RBP4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 GUCA2BQ16661 112 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 ATP6V1FQ16864 119 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 TMEM30BQ3MIR4 351 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 C19orf54Q5BKX5 351 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 CXorf66Q5JRM2 361 aaPredicted RBP4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 SOHLH1Q5JUK2 328 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 AVPI1Q5T686 147 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 DHRS7BQ6IAN0 325 aaPredicted RBP4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 VWA1Q6PCB0 445 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 H2BFWTQ7Z2G1 175 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 WDR86Q86TI4 376 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 TMEM217Q8N7C4 229 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 C15orf54Q8N8G6 183 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 ZNF709Q8N972 641 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 OR2Z1Q8NG97 314 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 LYPD6BQ8NI32 183 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 TCTEX1D2Q8WW35 142 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 PINX1Q96BK5 328 aaKnown RBP4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 GPR146Q96CH1 333 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 CYYR1Q96J86 154 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 PSMG3Q9BT73 122 aaPredicted RBP4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 PARD6GQ9BYG4 376 aaPredicted RBP4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 OPN3Q9H1Y3 402 aaPredicted RBP4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 SEBOXQ9HB31 216 aaPredicted RBP4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 WFDC1Q9HC57 220 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 ZNF71Q9NQZ8 489 aaPredicted RBP4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 UFSP2Q9NUQ7 469 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 OR6C3Q9NZP0 311 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms