RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 PGFP49763 221 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 RPL24P83731 157 aaKnown RBP4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 HLA-DRB5Q30154 266 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 HMGN2P46Q86SG4 172 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 OR51A4Q8NGJ6 313 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 PLPPR1Q8TBJ4 325 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 GLMPQ8WWB7 406 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 SMIM10Q96HG1 83 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 SMIM14Q96QK8 99 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 PMCHL2Q9BQD1 86 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 QTRT1Q9BXR0 403 aaKnown RBP4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 COMMD5Q9GZQ3 224 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 FSCN3Q9NQT6 498 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 DECR2Q9NUI1 292 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 WSB2Q9NYS7 404 aaPredicted RBP4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 DHDHQ9UQ10 334 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 ZNF443Q9Y2A4 671 aaPredicted RBP4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 A0A087WV48 116 aa4.34□□□□□ -1.72
TMEM39A-206ENST00000473684 TRAV25A0A0B4J276 109 aa4.34□□□□□ -1.72
TMEM39A-206ENST00000473684 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.72
TMEM39A-206ENST00000473684 MYADML2A6NDP7 307 aa4.34□□□□□ -1.72
TMEM39A-206ENST00000473684 LYPD3O95274 346 aa4.34□□□□□ -1.72
TMEM39A-206ENST00000473684 MT-ND6P03923 174 aa4.34□□□□□ -1.72
TMEM39A-206ENST00000473684 ALOX5APP20292 161 aa4.34□□□□□ -1.72
TMEM39A-206ENST00000473684 MDH2P40926 338 aaKnown RBP4.34□□□□□ -1.72
TMEM39A-206ENST00000473684 ZNF136P52737 540 aa4.34□□□□□ -1.72
TMEM39A-206ENST00000473684 CARD17Q5XLA6 110 aa4.34□□□□□ -1.72
TMEM39A-206ENST00000473684 ASCL4Q6XD76 172 aa4.34□□□□□ -1.72
TMEM39A-206ENST00000473684 LCNL1Q6ZST4 164 aa4.34□□□□□ -1.72
TMEM39A-206ENST00000473684 OLIG3Q7RTU3 272 aa4.34□□□□□ -1.72
TMEM39A-206ENST00000473684 CDC20BQ86Y33 519 aa4.34□□□□□ -1.72
TMEM39A-206ENST00000473684 VSTM2AQ8TAG5 236 aa4.34□□□□□ -1.72
TMEM39A-206ENST00000473684 MRPL30Q8TCC3 161 aaKnown RBP4.34□□□□□ -1.72
TMEM39A-206ENST00000473684 OR5P3Q8WZ94 311 aa4.34□□□□□ -1.72
TMEM39A-206ENST00000473684 GRAMD2BQ96HH9 432 aa4.34□□□□□ -1.72
TMEM39A-206ENST00000473684 LMF2Q9BU23 707 aaKnown RBP4.34□□□□□ -1.72
TMEM39A-206ENST00000473684 C11orf1Q9H5F2 150 aa4.34□□□□□ -1.72
TMEM39A-206ENST00000473684 FNDC4Q9H6D8 234 aaPredicted RBP4.34□□□□□ -1.72
TMEM39A-206ENST00000473684 IL36GQ9NZH8 169 aa4.34□□□□□ -1.72
TMEM39A-206ENST00000473684 CD207Q9UJ71 328 aa4.34□□□□□ -1.72
TMEM39A-206ENST00000473684 DENND4CQ5VZ89 1909 aa4.34□□□□□ -1.72
TMEM39A-206ENST00000473684 A0A1W2PS18 150 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 MYBPHLA2RUH7 354 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 OTOL1A6NHN0 477 aaPredicted RBP4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 M0QZQ0 153 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 SAP18O00422 153 aaKnown RBP4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 TRIAP1O43715 76 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 CRYBB3P26998 211 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 PLA2G5P39877 138 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 PSMB3P49720 205 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 DMWDQ09019 674 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 LINC01590Q5TEZ4 76 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 AMZ2Q86W34 360 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 SCCPDHQ8NBX0 429 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 RTN4IP1Q8WWV3 396 aaPredicted RBP4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 NUDT22Q9BRQ3 303 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 TPPP3Q9BW30 176 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 WDR61Q9GZS3 305 aaKnown RBP4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 MTCH1Q9NZJ7 389 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 C1RLQ9NZP8 487 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 SCN5AQ14524 2016 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 IGLV3-16A0A075B6K0 115 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 A0A1B0GVT2 93 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 LRP5LA4QPB2 252 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 FAM90A18PA6NE21 464 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 FAM90A16PA6NEW6 464 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 FAM90A9PA6NNJ1 464 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 FAM90A5PA8MXJ8 464 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 H3BMH7 237 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 PLPP3O14495 311 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 ZNF737O75373 536 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 HMGN2P05204 90 aaKnown RBP4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 FAM90A15PP0C7V4 464 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 FAM90A14PP0C7W9 464 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 CEBPBP17676 345 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 GATA3P23771 443 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 DNASE1L1P49184 302 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 ZNF133P52736 654 aaPredicted RBP4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 ATP5J2P56134 94 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 PRICKLE4Q2TBC4 344 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 ZNF658BQ4V348 819 aaPredicted RBP4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 WDR38Q5JTN6 314 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 ASPHD2Q6ICH7 369 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 LYPD6Q86Y78 171 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 OR5C1Q8NGR4 320 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 OR10AG1Q8NH19 301 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 NEUROG1Q92886 237 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 RNF183Q96D59 192 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 TNFRSF13CQ96RJ3 184 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 CLEC7AQ9BXN2 247 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 VN1R1Q9GZP7 353 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 GLIPR2Q9H4G4 154 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 GNB4Q9HAV0 340 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 TMEM74BQ9NUR3 256 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 CYSLTR1Q9Y271 337 aa4.33□□□□□ -1.72
TMEM39A-206ENST00000473684 HELTA6NFD8 242 aa4.32□□□□□ -1.72
TMEM39A-206ENST00000473684 IGHG4P01861 327 aa4.32□□□□□ -1.72
TMEM39A-206ENST00000473684 MRPS34P82930 218 aaKnown RBP4.32□□□□□ -1.72
TMEM39A-206ENST00000473684 SERF2P84101 59 aa4.32□□□□□ -1.72
TMEM39A-206ENST00000473684 OR1Q1Q15612 314 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 169.9 ms