RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 EAF1Q96JC9 268 aaPredicted RBP14.35□□□□□ -0.11
SNX4-204ENST00000473417 S1PR3Q99500 378 aa14.35□□□□□ -0.11
SNX4-204ENST00000473417 CITED2Q99967 270 aaPredicted RBP14.35□□□□□ -0.11
SNX4-204ENST00000473417 TOLLIPQ9H0E2 274 aa14.35□□□□□ -0.11
SNX4-204ENST00000473417 MRPS7Q9Y2R9 242 aaKnown RBP14.35□□□□□ -0.11
SNX4-204ENST00000473417 CEPT1Q9Y6K0 416 aa14.35□□□□□ -0.11
SNX4-204ENST00000473417 SMIM31A0A1B0GVY4 71 aa14.34□□□□□ -0.11
SNX4-204ENST00000473417 MEIS3P1A6NDR6 274 aa14.34□□□□□ -0.11
SNX4-204ENST00000473417 SH2D7A6NKC9 451 aaPredicted RBP14.34□□□□□ -0.11
SNX4-204ENST00000473417 FAM25AB3EWG3 89 aa14.34□□□□□ -0.11
SNX4-204ENST00000473417 FAM25CB3EWG5 89 aa14.34□□□□□ -0.11
SNX4-204ENST00000473417 FAM25GB3EWG6 89 aa14.34□□□□□ -0.11
SNX4-204ENST00000473417 H3BMQ9 156 aa14.34□□□□□ -0.11
SNX4-204ENST00000473417 PEX14O75381 377 aa14.34□□□□□ -0.11
SNX4-204ENST00000473417 DIRAS3O95661 229 aa14.34□□□□□ -0.11
SNX4-204ENST00000473417 CD1BP29016 333 aa14.34□□□□□ -0.11
SNX4-204ENST00000473417 SOX6P35712 828 aa14.34□□□□□ -0.11
SNX4-204ENST00000473417 KPRPQ5T749 579 aaPredicted RBP14.34□□□□□ -0.11
SNX4-204ENST00000473417 BEST4Q8NFU0 473 aa14.34□□□□□ -0.11
SNX4-204ENST00000473417 OR2T10Q8NGZ9 312 aa14.34□□□□□ -0.11
SNX4-204ENST00000473417 NABP2Q9BQ15 211 aa14.34□□□□□ -0.11
SNX4-204ENST00000473417 ZNF251Q9BRH9 671 aa14.34□□□□□ -0.11
SNX4-204ENST00000473417 ANXA10Q9UJ72 324 aa14.34□□□□□ -0.11
SNX4-204ENST00000473417 ZNF221Q9UK13 617 aa14.34□□□□□ -0.11
SNX4-204ENST00000473417 DNAH3Q8TD57 4116 aa14.33□□□□□ -0.12
SNX4-204ENST00000473417 CCDC160A6NGH7 325 aa14.33□□□□□ -0.12
SNX4-204ENST00000473417 OR8U9P0C7N5 309 aa14.33□□□□□ -0.12
SNX4-204ENST00000473417 GPR12P47775 334 aa14.33□□□□□ -0.12
SNX4-204ENST00000473417 LSAMPQ13449 338 aa14.33□□□□□ -0.12
SNX4-204ENST00000473417 EBI3Q14213 229 aa14.33□□□□□ -0.12
SNX4-204ENST00000473417 ABCA11PQ4W5N1 156 aa14.33□□□□□ -0.12
SNX4-204ENST00000473417 CNIH2Q6PI25 160 aa14.33□□□□□ -0.12
SNX4-204ENST00000473417 HOGA1Q86XE5 327 aa14.33□□□□□ -0.12
SNX4-204ENST00000473417 H1FOOQ8IZA3 346 aaPredicted RBP14.33□□□□□ -0.12
SNX4-204ENST00000473417 OR8U1Q8NH10 309 aa14.33□□□□□ -0.12
SNX4-204ENST00000473417 GHITMQ9H3K2 345 aa14.33□□□□□ -0.12
SNX4-204ENST00000473417 MOB4Q9Y3A3 225 aa14.33□□□□□ -0.12
SNX4-204ENST00000473417 RBM7Q9Y580 266 aaKnown RBP14.33□□□□□ -0.12
SNX4-204ENST00000473417 J3QRK9 145 aa14.32□□□□□ -0.12
SNX4-204ENST00000473417 MOSP00540 346 aa14.32□□□□□ -0.12
SNX4-204ENST00000473417 HLA-DQB1P01920 261 aa14.32□□□□□ -0.12
SNX4-204ENST00000473417 AMY1AP04745 511 aa14.32□□□□□ -0.12
SNX4-204ENST00000473417 AMY2AP04746 511 aa14.32□□□□□ -0.12
SNX4-204ENST00000473417 CTXN2P0C2S0 81 aa14.32□□□□□ -0.12
SNX4-204ENST00000473417 CT45A6P0DMU7 189 aa14.32□□□□□ -0.12
SNX4-204ENST00000473417 CT45A5P0DMU8 189 aa14.32□□□□□ -0.12
SNX4-204ENST00000473417 CT45A7P0DMV0 189 aa14.32□□□□□ -0.12
SNX4-204ENST00000473417 NFYAP23511 347 aaPredicted RBP14.32□□□□□ -0.12
SNX4-204ENST00000473417 CBX5P45973 191 aa14.32□□□□□ -0.12
SNX4-204ENST00000473417 FAM71F2Q6NXP2 309 aa14.32□□□□□ -0.12
SNX4-204ENST00000473417 GLDNQ6ZMI3 551 aaPredicted RBP14.32□□□□□ -0.12
SNX4-204ENST00000473417 DYNC2LI1Q8TCX1 351 aa14.32□□□□□ -0.12
SNX4-204ENST00000473417 NOTCH3Q9UM47 2321 aa14.32□□□□□ -0.12
SNX4-204ENST00000473417 NCBP2LA6PVI3 153 aaKnown RBP14.31□□□□□ -0.12
SNX4-204ENST00000473417 M0QZK8 103 aa14.31□□□□□ -0.12
SNX4-204ENST00000473417 PROP1O75360 226 aa14.31□□□□□ -0.12
SNX4-204ENST00000473417 PRSS3P35030 304 aa14.31□□□□□ -0.12
SNX4-204ENST00000473417 ARPC4P59998 168 aa14.31□□□□□ -0.12
SNX4-204ENST00000473417 C9orf152Q5JTZ5 239 aa14.31□□□□□ -0.12
SNX4-204ENST00000473417 SNX29P2Q8IUI4 249 aa14.31□□□□□ -0.12
SNX4-204ENST00000473417 Q8N6K4 173 aa14.31□□□□□ -0.12
SNX4-204ENST00000473417 DRAXINQ8NBI3 349 aaPredicted RBP14.31□□□□□ -0.12
SNX4-204ENST00000473417 OR4F17Q8NGA8 305 aa14.31□□□□□ -0.12
SNX4-204ENST00000473417 R3HDM4Q96D70 268 aa14.31□□□□□ -0.12
SNX4-204ENST00000473417 OR4F4Q96R69 305 aa14.31□□□□□ -0.12
SNX4-204ENST00000473417 OR2D2Q9H210 308 aa14.31□□□□□ -0.12
SNX4-204ENST00000473417 IFT46Q9NQC8 304 aa14.31□□□□□ -0.12
SNX4-204ENST00000473417 CTDSP2O14595 271 aa14.3□□□□□ -0.12
SNX4-204ENST00000473417 RGS5O15539 181 aa14.3□□□□□ -0.12
SNX4-204ENST00000473417 CD83Q01151 205 aa14.3□□□□□ -0.12
SNX4-204ENST00000473417 C5orf56Q8N8D9 126 aa14.3□□□□□ -0.12
SNX4-204ENST00000473417 OR5AU1Q8NGC0 362 aa14.3□□□□□ -0.12
SNX4-204ENST00000473417 SNAPC3Q92966 411 aa14.3□□□□□ -0.12
SNX4-204ENST00000473417 CCDC59Q9P031 241 aaKnown RBP14.3□□□□□ -0.12
SNX4-204ENST00000473417 EXTL2Q9UBQ6 330 aa14.3□□□□□ -0.12
SNX4-204ENST00000473417 M0R1X1 148 aa14.29□□□□□ -0.12
SNX4-204ENST00000473417 LINC00205P59089 165 aa14.29□□□□□ -0.12
SNX4-204ENST00000473417 FAM131AQ6UXB0 335 aa14.29□□□□□ -0.12
SNX4-204ENST00000473417 RITA1Q96K30 269 aa14.29□□□□□ -0.12
SNX4-204ENST00000473417 MIXL1Q9H2W2 232 aa14.29□□□□□ -0.12
SNX4-204ENST00000473417 SDHAF2Q9NX18 166 aa14.29□□□□□ -0.12
SNX4-204ENST00000473417 FGF16O43320 207 aa14.28□□□□□ -0.12
SNX4-204ENST00000473417 F2RL1P55085 397 aa14.28□□□□□ -0.12
SNX4-204ENST00000473417 TCTEX1D4Q5JR98 221 aa14.28□□□□□ -0.12
SNX4-204ENST00000473417 LAX1Q8IWV1 398 aa14.28□□□□□ -0.12
SNX4-204ENST00000473417 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.28□□□□□ -0.12
SNX4-204ENST00000473417 RBM38Q9H0Z9 239 aaKnown RBP14.28□□□□□ -0.12
SNX4-204ENST00000473417 PLSCR3Q9NRY6 295 aa14.28□□□□□ -0.12
SNX4-204ENST00000473417 NECAP2Q9NVZ3 263 aa14.28□□□□□ -0.12
SNX4-204ENST00000473417 GAB2Q9UQC2 676 aa14.28□□□□□ -0.12
SNX4-204ENST00000473417 OR2W1Q9Y3N9 320 aa14.28□□□□□ -0.12
SNX4-204ENST00000473417 H0YJW9 148 aa14.27□□□□□ -0.13
SNX4-204ENST00000473417 H7C2Y5 167 aa14.27□□□□□ -0.13
SNX4-204ENST00000473417 OR5H8P0DN80 308 aa14.27□□□□□ -0.13
SNX4-204ENST00000473417 FCGR2CP31995 323 aa14.27□□□□□ -0.13
SNX4-204ENST00000473417 LUMP51884 338 aaPredicted RBP14.27□□□□□ -0.13
SNX4-204ENST00000473417 ACTBP60709 375 aa14.27□□□□□ -0.13
SNX4-204ENST00000473417 OXLD1Q5BKU9 147 aa14.27□□□□□ -0.13
SNX4-204ENST00000473417 CENPVQ7Z7K6 275 aaPredicted RBP14.27□□□□□ -0.13
SNX4-204ENST00000473417 Q8N9W7 124 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms