RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 AKIRIN1Q9H9L7 192 aaPredicted RBP7.36□□□□□ -1.23
CD47-204ENST00000471694 ZFPL1O95159 310 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 PPYP01298 95 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 WNT2P09544 360 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 B2MP61769 119 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 MAPK1IP1LQ8NDC0 245 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 PPP1R1CQ8WVI7 109 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 TCEAL7Q9BRU2 100 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 MRM2Q9UI43 246 aaKnown RBP7.35□□□□□ -1.23
CD47-204ENST00000471694 MUC1P15941 1255 aaPredicted RBP7.35□□□□□ -1.23
CD47-204ENST00000471694 TCL1AP56279 114 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 CD81P60033 236 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 POLR2GP62487 172 aaKnown RBP eCLIP7.35□□□□□ -1.23
CD47-204ENST00000471694 PEAR1Q5VY43 1037 aaPredicted RBP7.35□□□□□ -1.23
CD47-204ENST00000471694 FAM216AQ8WUB2 273 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 WDYHV1Q96HA8 205 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 EXOGQ9Y2C4 368 aaKnown RBP7.35□□□□□ -1.23
CD47-204ENST00000471694 TNFRSF18Q9Y5U5 241 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 TRGV4A0A0C4DH28 118 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 GABRB1P18505 474 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 DLX6P56179 175 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 QTRT1Q9BXR0 403 aaKnown RBP7.35□□□□□ -1.23
CD47-204ENST00000471694 IGHV2OR16-5A0A0B4J2B6 119 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 C17orf100A8MU93 164 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 TCF21O43680 179 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 SRSF10O75494 262 aaKnown RBP7.35□□□□□ -1.23
CD47-204ENST00000471694 ZNF688P0C7X2 276 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 ANOS1P23352 680 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 SRSF9Q13242 221 aaKnown RBP eCLIP7.35□□□□□ -1.23
CD47-204ENST00000471694 FAM201AQ5SY85 155 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 NXF2Q9GZY0 626 aaKnown RBP7.35□□□□□ -1.23
CD47-204ENST00000471694 LAMB2P55268 1798 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 KLF7O75840 302 aaPredicted RBP7.35□□□□□ -1.23
CD47-204ENST00000471694 GPR183P32249 361 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 COMPP49747 757 aaPredicted RBP7.35□□□□□ -1.23
CD47-204ENST00000471694 C11orf91Q3C1V1 193 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 PRSS54Q6PEW0 395 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 CXorf65A6NEN9 183 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 TIMM23O14925 209 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 CGB3P0DN86 165 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 IGHV1-2P23083 117 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 SUMO2P61956 95 aaKnown RBP7.35□□□□□ -1.23
CD47-204ENST00000471694 SAMD13Q5VXD3 122 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 ZNF66Q6ZN08 573 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 BPIFA4PQ86YQ2 179 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 MRPL30Q8TCC3 161 aaKnown RBP7.35□□□□□ -1.23
CD47-204ENST00000471694 AQP10Q96PS8 301 aa7.35□□□□□ -1.23
CD47-204ENST00000471694 GEMIN7Q9H840 131 aaKnown RBP7.35□□□□□ -1.23
CD47-204ENST00000471694 A0A0G2JMM0 328 aa7.34□□□□□ -1.23
CD47-204ENST00000471694 A0A1W2PPB8 328 aa7.34□□□□□ -1.23
CD47-204ENST00000471694 LOC390937A0A1W2PQ73 354 aa7.34□□□□□ -1.23
CD47-204ENST00000471694 A0A1W2PRS3 328 aa7.34□□□□□ -1.23
CD47-204ENST00000471694 KIR3DP1A8MWS1 328 aa7.34□□□□□ -1.23
CD47-204ENST00000471694 NGFRP08138 427 aa7.34□□□□□ -1.23
CD47-204ENST00000471694 LINC00469Q8N7U9 141 aa7.34□□□□□ -1.23
CD47-204ENST00000471694 TMEM167AQ8TBQ9 72 aa7.34□□□□□ -1.23
CD47-204ENST00000471694 NRG4Q8WWG1 115 aa7.34□□□□□ -1.23
CD47-204ENST00000471694 CHRNA10Q9GZZ6 450 aa7.34□□□□□ -1.23
CD47-204ENST00000471694 TRAV20A0A0B4J274 112 aa7.34□□□□□ -1.23
CD47-204ENST00000471694 CTAG2O75638 210 aa7.34□□□□□ -1.23
CD47-204ENST00000471694 MOSP00540 346 aa7.34□□□□□ -1.23
CD47-204ENST00000471694 ZNRF1Q8ND25 227 aa7.34□□□□□ -1.23
CD47-204ENST00000471694 ZNF502Q8TBZ5 544 aa7.34□□□□□ -1.23
CD47-204ENST00000471694 TMEM45BQ96B21 275 aa7.34□□□□□ -1.23
CD47-204ENST00000471694 FBXL15Q9H469 300 aa7.34□□□□□ -1.23
CD47-204ENST00000471694 A0A0A6YYJ9 748 aa7.34□□□□□ -1.23
CD47-204ENST00000471694 ZNF154Q13106 437 aa7.34□□□□□ -1.23
CD47-204ENST00000471694 IQCJQ1A5X6 159 aa7.34□□□□□ -1.23
CD47-204ENST00000471694 GPX7Q96SL4 187 aaPredicted RBP7.34□□□□□ -1.23
CD47-204ENST00000471694 PRSS27Q9BQR3 290 aa7.34□□□□□ -1.23
CD47-204ENST00000471694 SLC2A9Q9NRM0 540 aa7.34□□□□□ -1.23
CD47-204ENST00000471694 CD99P14209 185 aa7.34□□□□□ -1.23
CD47-204ENST00000471694 OR10J1P30954 320 aa7.34□□□□□ -1.23
CD47-204ENST00000471694 RNASE4P34096 147 aaKnown RBP7.34□□□□□ -1.23
CD47-204ENST00000471694 LDLRAD3Q86YD5 345 aa7.34□□□□□ -1.23
CD47-204ENST00000471694 KLHL30-AS1Q8NEE0 82 aa7.34□□□□□ -1.23
CD47-204ENST00000471694 SCN1AP35498 2009 aa7.34□□□□□ -1.24
CD47-204ENST00000471694 KLK2P20151 261 aa7.34□□□□□ -1.24
CD47-204ENST00000471694 CMC4P56277 68 aaPredicted RBP7.34□□□□□ -1.24
CD47-204ENST00000471694 MGAT2Q10469 447 aa7.34□□□□□ -1.24
CD47-204ENST00000471694 C12orf73Q69YU5 71 aa7.34□□□□□ -1.24
CD47-204ENST00000471694 OR2C3Q8N628 320 aa7.34□□□□□ -1.24
CD47-204ENST00000471694 ANGPTL6Q8NI99 470 aa7.34□□□□□ -1.24
CD47-204ENST00000471694 ALKBH7Q9BT30 221 aaPredicted RBP7.34□□□□□ -1.24
CD47-204ENST00000471694 MANBALQ9NQG1 85 aa7.34□□□□□ -1.24
CD47-204ENST00000471694 PCM1Q15154 2024 aa7.33□□□□□ -1.24
CD47-204ENST00000471694 TMEM127O75204 238 aa7.33□□□□□ -1.24
CD47-204ENST00000471694 CTSBP07858 339 aa7.33□□□□□ -1.24
CD47-204ENST00000471694 FAM219BQ5XKK7 198 aa7.33□□□□□ -1.24
CD47-204ENST00000471694 WNT10AQ9GZT5 417 aa7.33□□□□□ -1.24
CD47-204ENST00000471694 KIAA1551Q9HCM1 1747 aa7.33□□□□□ -1.24
CD47-204ENST00000471694 KIF13BQ9NQT8 1826 aa7.33□□□□□ -1.24
CD47-204ENST00000471694 FCN1O00602 326 aa7.33□□□□□ -1.24
CD47-204ENST00000471694 CDC42EP2O14613 210 aa7.33□□□□□ -1.24
CD47-204ENST00000471694 AMY1AP04745 511 aa7.33□□□□□ -1.24
CD47-204ENST00000471694 SNAI3Q3KNW1 292 aa7.33□□□□□ -1.24
CD47-204ENST00000471694 ZNF429Q86V71 674 aa7.33□□□□□ -1.24
CD47-204ENST00000471694 LSM10Q969L4 123 aaKnown RBP7.33□□□□□ -1.24
CD47-204ENST00000471694 SEC11CQ9BY50 192 aa7.33□□□□□ -1.24
CD47-204ENST00000471694 MED19A0JLT2 244 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms