RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 RBM14Q96PK6 669 aaKnown RBP10.8□□□□□ -0.68
HMGN1-211ENST00000471260 OR4F4Q96R69 305 aa10.8□□□□□ -0.68
HMGN1-211ENST00000471260 OCSTAMPQ9BR26 566 aa10.8□□□□□ -0.68
HMGN1-211ENST00000471260 UQCC2Q9BRT2 126 aa10.8□□□□□ -0.68
HMGN1-211ENST00000471260 GINS4Q9BRT9 223 aa10.8□□□□□ -0.68
HMGN1-211ENST00000471260 DPCDQ9BVM2 203 aaPredicted RBP10.8□□□□□ -0.68
HMGN1-211ENST00000471260 SLC2A8Q9NY64 477 aa10.8□□□□□ -0.68
HMGN1-211ENST00000471260 IDI2-AS1Q9NZ38 188 aa10.8□□□□□ -0.68
HMGN1-211ENST00000471260 VWFP04275 2813 aa10.79□□□□□ -0.68
HMGN1-211ENST00000471260 J3QR06 171 aa10.79□□□□□ -0.68
HMGN1-211ENST00000471260 LDLRAD4O15165 306 aa10.79□□□□□ -0.68
HMGN1-211ENST00000471260 FAM106CPP0CH98 169 aa10.79□□□□□ -0.68
HMGN1-211ENST00000471260 CD28P10747 220 aa10.79□□□□□ -0.68
HMGN1-211ENST00000471260 GTF2F2P13984 249 aa10.79□□□□□ -0.68
HMGN1-211ENST00000471260 NFYBP25208 207 aa10.79□□□□□ -0.68
HMGN1-211ENST00000471260 RBM11P57052 281 aaKnown RBP10.79□□□□□ -0.68
HMGN1-211ENST00000471260 ARPC4P59998 168 aa10.79□□□□□ -0.68
HMGN1-211ENST00000471260 EXOSC2Q13868 293 aaKnown RBP10.79□□□□□ -0.68
HMGN1-211ENST00000471260 SUMF2Q8NBJ7 301 aa10.79□□□□□ -0.68
HMGN1-211ENST00000471260 OR51D1Q8NGF3 324 aa10.79□□□□□ -0.68
HMGN1-211ENST00000471260 OR13A1Q8NGR1 328 aa10.79□□□□□ -0.68
HMGN1-211ENST00000471260 OR10K1Q8NGX5 313 aa10.79□□□□□ -0.68
HMGN1-211ENST00000471260 RPEQ96AT9 228 aa10.79□□□□□ -0.68
HMGN1-211ENST00000471260 ORAI1Q96D31 301 aa10.79□□□□□ -0.68
HMGN1-211ENST00000471260 MRPS24Q96EL2 167 aaKnown RBP10.79□□□□□ -0.68
HMGN1-211ENST00000471260 SLC25A33Q9BSK2 321 aa10.79□□□□□ -0.68
HMGN1-211ENST00000471260 PIPOXQ9P0Z9 390 aa10.79□□□□□ -0.68
HMGN1-211ENST00000471260 TMEM272A0A1B0GTI8 110 aa10.78□□□□□ -0.68
HMGN1-211ENST00000471260 METTL21EPA6NDL7 271 aa10.78□□□□□ -0.68
HMGN1-211ENST00000471260 FAM90A18PA6NE21 464 aa10.78□□□□□ -0.68
HMGN1-211ENST00000471260 FAM90A16PA6NEW6 464 aa10.78□□□□□ -0.68
HMGN1-211ENST00000471260 FAM90A20PA6NIJ5 464 aa10.78□□□□□ -0.68
HMGN1-211ENST00000471260 FAM90A9PA6NNJ1 464 aa10.78□□□□□ -0.68
HMGN1-211ENST00000471260 FAM90A12PA8MX19 464 aa10.78□□□□□ -0.68
HMGN1-211ENST00000471260 FAM90A5PA8MXJ8 464 aa10.78□□□□□ -0.68
HMGN1-211ENST00000471260 L7N2F9 121 aa10.78□□□□□ -0.68
HMGN1-211ENST00000471260 TSC22D2O75157 780 aa10.78□□□□□ -0.68
HMGN1-211ENST00000471260 B3GALNT1O75752 331 aa10.78□□□□□ -0.68
HMGN1-211ENST00000471260 OR7C1O76099 320 aaPredicted RBP10.78□□□□□ -0.68
HMGN1-211ENST00000471260 BPNT1O95861 308 aa10.78□□□□□ -0.68
HMGN1-211ENST00000471260 CD74P04233 296 aa10.78□□□□□ -0.68
HMGN1-211ENST00000471260 FAM90A15PP0C7V4 464 aa10.78□□□□□ -0.68
HMGN1-211ENST00000471260 FAM90A13PP0C7W8 464 aa10.78□□□□□ -0.68
HMGN1-211ENST00000471260 FAM90A14PP0C7W9 464 aa10.78□□□□□ -0.68
HMGN1-211ENST00000471260 FAM90A24PP0C7X0 464 aa10.78□□□□□ -0.68
HMGN1-211ENST00000471260 SERPINA2P20848 420 aa10.78□□□□□ -0.68
HMGN1-211ENST00000471260 RAB7AP51149 207 aa10.78□□□□□ -0.68
HMGN1-211ENST00000471260 RBM39Q14498 530 aaKnown RBP10.78□□□□□ -0.68
HMGN1-211ENST00000471260 STEAP1BQ6NZ63 245 aa10.78□□□□□ -0.68
HMGN1-211ENST00000471260 Q6ZS46 218 aa10.78□□□□□ -0.68
HMGN1-211ENST00000471260 BEST4Q8NFU0 473 aa10.78□□□□□ -0.68
HMGN1-211ENST00000471260 OR2AK2Q8NG84 335 aa10.78□□□□□ -0.68
HMGN1-211ENST00000471260 PLPPR1Q8TBJ4 325 aa10.78□□□□□ -0.68
HMGN1-211ENST00000471260 TOMM40LQ969M1 308 aa10.78□□□□□ -0.68
HMGN1-211ENST00000471260 SEC22CQ9BRL7 303 aa10.78□□□□□ -0.68
HMGN1-211ENST00000471260 SPACA1Q9HBV2 294 aa10.78□□□□□ -0.68
HMGN1-211ENST00000471260 NOTCH1P46531 2555 aa10.78□□□□□ -0.68
HMGN1-211ENST00000471260 TMEM30CPA0ZSE6 113 aa10.77□□□□□ -0.69
HMGN1-211ENST00000471260 GEMIN2O14893 280 aaKnown RBP10.77□□□□□ -0.69
HMGN1-211ENST00000471260 PLXNB1O43157 2135 aa10.77□□□□□ -0.69
HMGN1-211ENST00000471260 RRASP10301 218 aa10.77□□□□□ -0.69
HMGN1-211ENST00000471260 CD24P25063 80 aa10.77□□□□□ -0.69
HMGN1-211ENST00000471260 FGL1Q08830 312 aa10.77□□□□□ -0.69
HMGN1-211ENST00000471260 OPCMLQ14982 345 aa10.77□□□□□ -0.69
HMGN1-211ENST00000471260 NSUN5P1Q3KNT7 163 aa10.77□□□□□ -0.69
HMGN1-211ENST00000471260 C2orf76Q3KRA6 126 aa10.77□□□□□ -0.69
HMGN1-211ENST00000471260 TOR2AQ5JU69 321 aa10.77□□□□□ -0.69
HMGN1-211ENST00000471260 KPRPQ5T749 579 aaPredicted RBP10.77□□□□□ -0.69
HMGN1-211ENST00000471260 SAMD5Q5TGI4 173 aa10.77□□□□□ -0.69
HMGN1-211ENST00000471260 LYPD6Q86Y78 171 aa10.77□□□□□ -0.69
HMGN1-211ENST00000471260 OR8H3Q8N146 312 aa10.77□□□□□ -0.69
HMGN1-211ENST00000471260 OR5AU1Q8NGC0 362 aa10.77□□□□□ -0.69
HMGN1-211ENST00000471260 OR52M1Q8NGK5 317 aa10.77□□□□□ -0.69
HMGN1-211ENST00000471260 MRGPRDQ8TDS7 321 aa10.77□□□□□ -0.69
HMGN1-211ENST00000471260 PRRT1Q99946 306 aa10.77□□□□□ -0.69
HMGN1-211ENST00000471260 CITED2Q99967 270 aaPredicted RBP10.77□□□□□ -0.69
HMGN1-211ENST00000471260 RAB9BQ9NP90 201 aa10.77□□□□□ -0.69
HMGN1-211ENST00000471260 RAB22AQ9UL26 194 aa10.77□□□□□ -0.69
HMGN1-211ENST00000471260 FLVCR2Q9UPI3 526 aa10.77□□□□□ -0.69
HMGN1-211ENST00000471260 PSG11Q9UQ72 335 aa10.77□□□□□ -0.69
HMGN1-211ENST00000471260 TRAV18A0A075B6X5 111 aa10.76□□□□□ -0.69
HMGN1-211ENST00000471260 MPC2O95563 127 aa10.76□□□□□ -0.69
HMGN1-211ENST00000471260 CRYZL1O95825 349 aa10.76□□□□□ -0.69
HMGN1-211ENST00000471260 RPA2P15927 270 aa10.76□□□□□ -0.69
HMGN1-211ENST00000471260 ANXA7P20073 488 aaKnown RBP10.76□□□□□ -0.69
HMGN1-211ENST00000471260 NFYAP23511 347 aaPredicted RBP10.76□□□□□ -0.69
HMGN1-211ENST00000471260 S100A11P31949 105 aa10.76□□□□□ -0.69
HMGN1-211ENST00000471260 BEAN1Q3B7T3 259 aa10.76□□□□□ -0.69
HMGN1-211ENST00000471260 TMEM30BQ3MIR4 351 aa10.76□□□□□ -0.69
HMGN1-211ENST00000471260 Q3ZCU0 254 aa10.76□□□□□ -0.69
HMGN1-211ENST00000471260 SLC22A6Q4U2R8 563 aa10.76□□□□□ -0.69
HMGN1-211ENST00000471260 ABCA11PQ4W5N1 156 aa10.76□□□□□ -0.69
HMGN1-211ENST00000471260 OR2W3Q7Z3T1 314 aa10.76□□□□□ -0.69
HMGN1-211ENST00000471260 CENPVQ7Z7K6 275 aaPredicted RBP10.76□□□□□ -0.69
HMGN1-211ENST00000471260 C1QL4Q86Z23 238 aa10.76□□□□□ -0.69
HMGN1-211ENST00000471260 C8orf31Q8N9H6 132 aa10.76□□□□□ -0.69
HMGN1-211ENST00000471260 RFESDQ8TAC1 157 aa10.76□□□□□ -0.69
HMGN1-211ENST00000471260 FAM46BQ96A09 425 aa10.76□□□□□ -0.69
HMGN1-211ENST00000471260 R3HDM4Q96D70 268 aa10.76□□□□□ -0.69
HMGN1-211ENST00000471260 CITED4Q96RK1 184 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms