RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM5-209	ENST00000468872	CDIPT	O14735	213 aa		2.58	□□□□□ -2
LSM5-209	ENST00000468872	COX7A2P2	O60397	106 aa		2.58	□□□□□ -2
LSM5-209	ENST00000468872	CECR9	P0C854	216 aa		2.58	□□□□□ -2
LSM5-209	ENST00000468872	INAFM2	P0DMQ5	153 aa		2.58	□□□□□ -2
LSM5-209	ENST00000468872	UGT2B10	P36537	528 aa		2.58	□□□□□ -2
LSM5-209	ENST00000468872	MAGEA3	P43357	314 aa		2.58	□□□□□ -2
LSM5-209	ENST00000468872	LGALS7	P47929	136 aa		2.58	□□□□□ -2
LSM5-209	ENST00000468872	GCLM	P48507	274 aa		2.58	□□□□□ -2
LSM5-209	ENST00000468872	TTPA	P49638	278 aa		2.58	□□□□□ -2
LSM5-209	ENST00000468872	TSPAN5	P62079	268 aa		2.58	□□□□□ -2
LSM5-209	ENST00000468872	FMOD	Q06828	376 aa		2.58	□□□□□ -2
LSM5-209	ENST00000468872	BNIP2	Q12982	314 aa		2.58	□□□□□ -2
LSM5-209	ENST00000468872	UBE2NL	Q5JXB2	153 aa		2.58	□□□□□ -2
LSM5-209	ENST00000468872	CDKL4	Q5MAI5	379 aa		2.58	□□□□□ -2
LSM5-209	ENST00000468872	HBM	Q6B0K9	141 aa		2.58	□□□□□ -2
LSM5-209	ENST00000468872	OR4K17	Q8NGC6	315 aa		2.58	□□□□□ -2
LSM5-209	ENST00000468872	OR8S1	Q8NH09	359 aa		2.58	□□□□□ -2
LSM5-209	ENST00000468872	NELFB	Q8WX92	580 aa		2.58	□□□□□ -2
LSM5-209	ENST00000468872	YIPF5	Q969M3	257 aa		2.58	□□□□□ -2
LSM5-209	ENST00000468872	ZMYND19	Q96E35	227 aa	Predicted RBP	2.58	□□□□□ -2
LSM5-209	ENST00000468872	YPEL4	Q96NS1	127 aa		2.58	□□□□□ -2
LSM5-209	ENST00000468872	TSGA10	Q9BZW7	698 aa		2.58	□□□□□ -2
LSM5-209	ENST00000468872	ZNF436	Q9C0F3	470 aa	Predicted RBP	2.58	□□□□□ -2
LSM5-209	ENST00000468872	TRIM45	Q9H8W5	580 aa	Predicted RBP	2.58	□□□□□ -2
LSM5-209	ENST00000468872	WDR54	Q9H977	334 aa		2.58	□□□□□ -2
LSM5-209	ENST00000468872	IFT46	Q9NQC8	304 aa		2.58	□□□□□ -2
LSM5-209	ENST00000468872	DIABLO	Q9NR28	239 aa		2.58	□□□□□ -2
LSM5-209	ENST00000468872	ZNF492	Q9P255	531 aa		2.58	□□□□□ -2
LSM5-209	ENST00000468872	ZNF780B	Q9Y6R6	833 aa		2.58	□□□□□ -2
LSM5-209	ENST00000468872	RAD50	Q92878	1312 aa		2.58	□□□□□ -2
LSM5-209	ENST00000468872	IGLL5	B9A064	214 aa		2.57	□□□□□ -2
LSM5-209	ENST00000468872	RGS5	O15539	181 aa		2.57	□□□□□ -2
LSM5-209	ENST00000468872	COCH	O43405	550 aa		2.57	□□□□□ -2
LSM5-209	ENST00000468872	MYO1D	O94832	1006 aa		2.57	□□□□□ -2
LSM5-209	ENST00000468872	IGHG2	P01859	326 aa		2.57	□□□□□ -2
LSM5-209	ENST00000468872	KDELR2	P33947	212 aa		2.57	□□□□□ -2
LSM5-209	ENST00000468872	NUDT2	P50583	147 aa		2.57	□□□□□ -2
LSM5-209	ENST00000468872	OR10A3	P58181	314 aa		2.57	□□□□□ -2
LSM5-209	ENST00000468872	OR4D1	Q15615	310 aa		2.57	□□□□□ -2
LSM5-209	ENST00000468872	TRAM1	Q15629	374 aa		2.57	□□□□□ -2
LSM5-209	ENST00000468872	GLYAT	Q6IB77	296 aa		2.57	□□□□□ -2
LSM5-209	ENST00000468872	ZNF773	Q6PK81	442 aa		2.57	□□□□□ -2
LSM5-209	ENST00000468872	OR8A1	Q8NGG7	326 aa		2.57	□□□□□ -2
LSM5-209	ENST00000468872	OR6K3	Q8NGY3	331 aa		2.57	□□□□□ -2
LSM5-209	ENST00000468872	PHOSPHO2	Q8TCD6	241 aa		2.57	□□□□□ -2
LSM5-209	ENST00000468872	RORB	Q92753	470 aa		2.57	□□□□□ -2
LSM5-209	ENST00000468872	ITFG2	Q969R8	447 aa		2.57	□□□□□ -2
LSM5-209	ENST00000468872	ZNF251	Q9BRH9	671 aa		2.57	□□□□□ -2
LSM5-209	ENST00000468872	PARD6G	Q9BYG4	376 aa	Predicted RBP	2.57	□□□□□ -2
LSM5-209	ENST00000468872	PSMD13	Q9UNM6	376 aa		2.57	□□□□□ -2
LSM5-209	ENST00000468872	NRCAM	Q92823	1304 aa		2.57	□□□□□ -2
LSM5-209	ENST00000468872	IGKV1OR2-108	A0A075B7D4	117 aa		2.56	□□□□□ -2
LSM5-209	ENST00000468872	MYBPHL	A2RUH7	354 aa		2.56	□□□□□ -2
LSM5-209	ENST00000468872	GMNC	A6NCL1	334 aa		2.56	□□□□□ -2
LSM5-209	ENST00000468872	TOX3	O15405	576 aa	Predicted RBP	2.56	□□□□□ -2
LSM5-209	ENST00000468872	AQP9	O43315	295 aa		2.56	□□□□□ -2
LSM5-209	ENST00000468872	ADAP1	O75689	374 aa		2.56	□□□□□ -2
LSM5-209	ENST00000468872	CYBA	P13498	195 aa		2.56	□□□□□ -2
LSM5-209	ENST00000468872	ZNF35	P13682	527 aa		2.56	□□□□□ -2
LSM5-209	ENST00000468872	CSRP1	P21291	193 aa	Known RBP	2.56	□□□□□ -2
LSM5-209	ENST00000468872	GTF2H1	P32780	548 aa		2.56	□□□□□ -2
LSM5-209	ENST00000468872	AQP5	P55064	265 aa		2.56	□□□□□ -2
LSM5-209	ENST00000468872	BAX	Q07812	192 aa		2.56	□□□□□ -2
LSM5-209	ENST00000468872	TRIP13	Q15645	432 aa	Predicted RBP	2.56	□□□□□ -2
LSM5-209	ENST00000468872	EXOC3L4	Q17RC7	722 aa		2.56	□□□□□ -2
LSM5-209	ENST00000468872	CEACAM21	Q3KPI0	293 aa		2.56	□□□□□ -2
LSM5-209	ENST00000468872	LDLRAD2	Q5SZI1	272 aa		2.56	□□□□□ -2
LSM5-209	ENST00000468872	PTRHD1	Q6GMV3	140 aa	Known RBP	2.56	□□□□□ -2
LSM5-209	ENST00000468872	AHSA2	Q719I0	299 aa		2.56	□□□□□ -2
LSM5-209	ENST00000468872	DEFB128	Q7Z7B8	93 aa		2.56	□□□□□ -2
LSM5-209	ENST00000468872	ZNF738	Q8NE65	137 aa		2.56	□□□□□ -2
LSM5-209	ENST00000468872	CCDC127	Q96BQ5	260 aa		2.56	□□□□□ -2
LSM5-209	ENST00000468872	LINC01587	Q99440	93 aa		2.56	□□□□□ -2
LSM5-209	ENST00000468872	PAIP2	Q9BPZ3	127 aa	Known RBP	2.56	□□□□□ -2
LSM5-209	ENST00000468872	UCK1	Q9HA47	277 aa		2.56	□□□□□ -2
LSM5-209	ENST00000468872	USH1C	Q9Y6N9	552 aa		2.56	□□□□□ -2
LSM5-209	ENST00000468872	MED13	Q9UHV7	2174 aa		2.56	□□□□□ -2
LSM5-209	ENST00000468872		A0A1B0GUL6	1792 aa		2.55	□□□□□ -2
LSM5-209	ENST00000468872		A0A1B0GX12	115 aa		2.55	□□□□□ -2
LSM5-209	ENST00000468872	VPS37C	A5D8V6	355 aa	Predicted RBP	2.55	□□□□□ -2
LSM5-209	ENST00000468872	PGP	A6NDG6	321 aa		2.55	□□□□□ -2
LSM5-209	ENST00000468872	CD300LB	A8K4G0	201 aa		2.55	□□□□□ -2
LSM5-209	ENST00000468872		H3BP45	60 aa		2.55	□□□□□ -2
LSM5-209	ENST00000468872	TNFAIP8	O95379	198 aa		2.55	□□□□□ -2
LSM5-209	ENST00000468872	SOD3	P08294	240 aa		2.55	□□□□□ -2
LSM5-209	ENST00000468872	PRTN3	P24158	256 aa		2.55	□□□□□ -2
LSM5-209	ENST00000468872	TSPO	P30536	169 aa		2.55	□□□□□ -2
LSM5-209	ENST00000468872	RPL14	P50914	215 aa	Known RBP	2.55	□□□□□ -2
LSM5-209	ENST00000468872	CD164	Q04900	197 aa		2.55	□□□□□ -2
LSM5-209	ENST00000468872	ZNF235	Q14590	738 aa		2.55	□□□□□ -2
LSM5-209	ENST00000468872	TIMM23B	Q5SRD1	257 aa		2.55	□□□□□ -2
LSM5-209	ENST00000468872	ZFAND6	Q6FIF0	208 aa		2.55	□□□□□ -2
LSM5-209	ENST00000468872	SPNS3	Q6ZMD2	512 aa		2.55	□□□□□ -2
LSM5-209	ENST00000468872	ADM2	Q7Z4H4	148 aa		2.55	□□□□□ -2
LSM5-209	ENST00000468872	MARCH3	Q86UD3	253 aa		2.55	□□□□□ -2
LSM5-209	ENST00000468872	PLCZ1	Q86YW0	608 aa		2.55	□□□□□ -2
LSM5-209	ENST00000468872	DNAAF3	Q8N9W5	541 aa		2.55	□□□□□ -2
LSM5-209	ENST00000468872	OR2M3	Q8NG83	312 aa		2.55	□□□□□ -2
LSM5-209	ENST00000468872	RNASEH2C	Q8TDP1	164 aa	Known RBP	2.55	□□□□□ -2
LSM5-209	ENST00000468872	LRRC45	Q96CN5	670 aa		2.55	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms