RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 IGHV1-3A0A0C4DH29 117 aa12.25□□□□□ -0.45
NPHP4-205ENST00000466897 NAP1L6A6NFF2 107 aa12.25□□□□□ -0.45
NPHP4-205ENST00000466897 UPK1BO75841 260 aa12.25□□□□□ -0.45
NPHP4-205ENST00000466897 IGLV2-14P01704 120 aa12.25□□□□□ -0.45
NPHP4-205ENST00000466897 ZNF57Q68EA5 555 aaPredicted RBP12.25□□□□□ -0.45
NPHP4-205ENST00000466897 TMEM86BQ8N661 226 aa12.25□□□□□ -0.45
NPHP4-205ENST00000466897 OR56B4Q8NH76 319 aa12.25□□□□□ -0.45
NPHP4-205ENST00000466897 TSC22D3Q99576 134 aa12.25□□□□□ -0.45
NPHP4-205ENST00000466897 FXYD6Q9H0Q3 95 aa12.25□□□□□ -0.45
NPHP4-205ENST00000466897 SDHAF2Q9NX18 166 aa12.25□□□□□ -0.45
NPHP4-205ENST00000466897 SCP2D1Q9UJQ7 156 aa12.25□□□□□ -0.45
NPHP4-205ENST00000466897 SOX21Q9Y651 276 aaPredicted RBP12.25□□□□□ -0.45
NPHP4-205ENST00000466897 A0A0A6YYJ9 748 aa12.24□□□□□ -0.45
NPHP4-205ENST00000466897 OR5H14A6NHG9 310 aa12.24□□□□□ -0.45
NPHP4-205ENST00000466897 PROP1O75360 226 aa12.24□□□□□ -0.45
NPHP4-205ENST00000466897 BRS3P32247 399 aa12.24□□□□□ -0.45
NPHP4-205ENST00000466897 FXYD4P59646 89 aa12.24□□□□□ -0.45
NPHP4-205ENST00000466897 EIF4EBP1Q13541 118 aaPredicted RBP12.24□□□□□ -0.45
NPHP4-205ENST00000466897 DIAPH2-AS1Q14236 149 aa12.24□□□□□ -0.45
NPHP4-205ENST00000466897 SURF2Q15527 256 aaPredicted RBP12.24□□□□□ -0.45
NPHP4-205ENST00000466897 LRRC75BQ2VPJ9 315 aa12.24□□□□□ -0.45
NPHP4-205ENST00000466897 FAAP20Q6NZ36 180 aa12.24□□□□□ -0.45
NPHP4-205ENST00000466897 DRAM1Q8N682 238 aa12.24□□□□□ -0.45
NPHP4-205ENST00000466897 BVESQ8NE79 360 aa12.24□□□□□ -0.45
NPHP4-205ENST00000466897 OR5R1Q8NH85 324 aa12.24□□□□□ -0.45
NPHP4-205ENST00000466897 ZNF418Q8TF45 676 aaPredicted RBP12.24□□□□□ -0.45
NPHP4-205ENST00000466897 SECTM1Q8WVN6 248 aa12.24□□□□□ -0.45
NPHP4-205ENST00000466897 CFHR4Q92496 578 aa12.24□□□□□ -0.45
NPHP4-205ENST00000466897 ADTRPQ96IZ2 230 aa12.24□□□□□ -0.45
NPHP4-205ENST00000466897 SLC5A7Q9GZV3 580 aa12.24□□□□□ -0.45
NPHP4-205ENST00000466897 RNF150Q9ULK6 438 aa12.24□□□□□ -0.45
NPHP4-205ENST00000466897 POMT1Q9Y6A1 747 aa12.24□□□□□ -0.45
NPHP4-205ENST00000466897 MDFIC2A0A1B0GVS7 189 aa12.23□□□□□ -0.45
NPHP4-205ENST00000466897 FAM90A9PA6NNJ1 464 aa12.23□□□□□ -0.45
NPHP4-205ENST00000466897 CENPXA8MT69 81 aa12.23□□□□□ -0.45
NPHP4-205ENST00000466897 J3QRK9 145 aa12.23□□□□□ -0.45
NPHP4-205ENST00000466897 CD1BP29016 333 aa12.23□□□□□ -0.45
NPHP4-205ENST00000466897 GNRHRP30968 328 aa12.23□□□□□ -0.45
NPHP4-205ENST00000466897 IER3P46695 156 aa12.23□□□□□ -0.45
NPHP4-205ENST00000466897 TAGLNQ01995 201 aaKnown RBP12.23□□□□□ -0.45
NPHP4-205ENST00000466897 RPL39P5Q59GN2 51 aa12.23□□□□□ -0.45
NPHP4-205ENST00000466897 RBMS3Q6XE24 437 aaKnown RBP12.23□□□□□ -0.45
NPHP4-205ENST00000466897 THNSL2Q86YJ6 484 aa12.23□□□□□ -0.45
NPHP4-205ENST00000466897 SLC38A6Q8IZM9 456 aa12.23□□□□□ -0.45
NPHP4-205ENST00000466897 SIGLECL1Q8N7X8 197 aa12.23□□□□□ -0.45
NPHP4-205ENST00000466897 OR51S1Q8NGJ8 323 aa12.23□□□□□ -0.45
NPHP4-205ENST00000466897 SSMEM1Q8WWF3 244 aa12.23□□□□□ -0.45
NPHP4-205ENST00000466897 ZDHHC16Q969W1 377 aa12.23□□□□□ -0.45
NPHP4-205ENST00000466897 C5orf30Q96GV9 206 aa12.23□□□□□ -0.45
NPHP4-205ENST00000466897 ZNF486Q96H40 463 aaPredicted RBP12.23□□□□□ -0.45
NPHP4-205ENST00000466897 HSD17B10Q99714 261 aaKnown RBP12.23□□□□□ -0.45
NPHP4-205ENST00000466897 NABP2Q9BQ15 211 aa12.23□□□□□ -0.45
NPHP4-205ENST00000466897 RSRP1Q9BUV0 290 aa12.23□□□□□ -0.45
NPHP4-205ENST00000466897 DPAGT1Q9H3H5 408 aa12.23□□□□□ -0.45
NPHP4-205ENST00000466897 MCUBQ9NWR8 336 aa12.23□□□□□ -0.45
NPHP4-205ENST00000466897 ZFHX3Q15911 3703 aa12.23□□□□□ -0.45
NPHP4-205ENST00000466897 CLDN34H7C241 214 aa12.22□□□□□ -0.45
NPHP4-205ENST00000466897 TIMM23O14925 209 aa12.22□□□□□ -0.45
NPHP4-205ENST00000466897 REG1BP48304 166 aa12.22□□□□□ -0.45
NPHP4-205ENST00000466897 THBS3P49746 956 aa12.22□□□□□ -0.45
NPHP4-205ENST00000466897 HILS1P60008 231 aa12.22□□□□□ -0.45
NPHP4-205ENST00000466897 SCGB2B2Q4G0G5 96 aa12.22□□□□□ -0.45
NPHP4-205ENST00000466897 ZNF66Q6ZN08 573 aa12.22□□□□□ -0.45
NPHP4-205ENST00000466897 IDO2Q6ZQW0 420 aa12.22□□□□□ -0.45
NPHP4-205ENST00000466897 OR5AN1Q8NGI8 311 aa12.22□□□□□ -0.45
NPHP4-205ENST00000466897 OR13C8Q8NGS7 320 aa12.22□□□□□ -0.45
NPHP4-205ENST00000466897 MRGPRFQ96AM1 343 aa12.22□□□□□ -0.45
NPHP4-205ENST00000466897 JMJD8Q96S16 334 aa12.22□□□□□ -0.45
NPHP4-205ENST00000466897 SSX3Q99909 188 aa12.22□□□□□ -0.45
NPHP4-205ENST00000466897 MRPL20Q9BYC9 149 aaKnown RBP12.22□□□□□ -0.45
NPHP4-205ENST00000466897 CCL28Q9NRJ3 127 aa12.22□□□□□ -0.45
NPHP4-205ENST00000466897 ABCB10Q9NRK6 738 aa12.22□□□□□ -0.45
NPHP4-205ENST00000466897 M0R1X1 148 aa12.21□□□□□ -0.45
NPHP4-205ENST00000466897 GPR31O00270 319 aa12.21□□□□□ -0.45
NPHP4-205ENST00000466897 PLA2G10O15496 165 aa12.21□□□□□ -0.45
NPHP4-205ENST00000466897 CT45A6P0DMU7 189 aa12.21□□□□□ -0.45
NPHP4-205ENST00000466897 CT45A5P0DMU8 189 aa12.21□□□□□ -0.45
NPHP4-205ENST00000466897 CT45A7P0DMV0 189 aa12.21□□□□□ -0.45
NPHP4-205ENST00000466897 MC5RP33032 325 aa12.21□□□□□ -0.45
NPHP4-205ENST00000466897 DUTP33316 252 aaKnown RBP12.21□□□□□ -0.45
NPHP4-205ENST00000466897 ASAH1Q13510 395 aa12.21□□□□□ -0.45
NPHP4-205ENST00000466897 EBI3Q14213 229 aa12.21□□□□□ -0.45
NPHP4-205ENST00000466897 KRTAP21-3Q3LHN1 58 aa12.21□□□□□ -0.45
NPHP4-205ENST00000466897 LIAT1Q6ZQX7 453 aa12.21□□□□□ -0.45
NPHP4-205ENST00000466897 ZNF818PQ6ZRF7 136 aa12.21□□□□□ -0.45
NPHP4-205ENST00000466897 CMTM1Q8IZ96 169 aa12.21□□□□□ -0.45
NPHP4-205ENST00000466897 ZFAND1Q8TCF1 268 aa12.21□□□□□ -0.45
NPHP4-205ENST00000466897 PIFOQ8TCI5 191 aa12.21□□□□□ -0.45
NPHP4-205ENST00000466897 DDB2Q92466 427 aa12.21□□□□□ -0.45
NPHP4-205ENST00000466897 SCGB3A2Q96PL1 93 aa12.21□□□□□ -0.45
NPHP4-205ENST00000466897 SLC25A21Q9BQT8 299 aaPredicted RBP12.21□□□□□ -0.45
NPHP4-205ENST00000466897 NF1P21359 2839 aa12.21□□□□□ -0.46
NPHP4-205ENST00000466897 C2CD3Q4AC94 2353 aa12.21□□□□□ -0.46
NPHP4-205ENST00000466897 SETD2Q9BYW2 2564 aaPredicted RBP12.21□□□□□ -0.46
NPHP4-205ENST00000466897 BTBD17A6NE02 478 aa12.2□□□□□ -0.46
NPHP4-205ENST00000466897 H0YJW9 148 aa12.2□□□□□ -0.46
NPHP4-205ENST00000466897 H3BUX3 64 aa12.2□□□□□ -0.46
NPHP4-205ENST00000466897 LYRM1O43325 122 aa12.2□□□□□ -0.46
NPHP4-205ENST00000466897 VENTXO95231 258 aa12.2□□□□□ -0.46
NPHP4-205ENST00000466897 FAM106CPP0CH98 169 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms