RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 OR2J3O76001 311 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 HAND1O96004 215 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 HLA-AP01891 365 aaKnown RBP2.58□□□□□ -2
VPS13D-203ENST00000466732 CTSLP07711 333 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 OR4A8P0C604 315 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 OR4Q2P0C623 313 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 SLC35G6P0C7Q6 338 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 OR12D1P0DN82 309 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 PSG2P11465 335 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 HIST1H1CP16403 213 aaKnown RBP2.58□□□□□ -2
VPS13D-203ENST00000466732 CXCL3P19876 107 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 ALOX5APP20292 161 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 HIST1H1TP22492 207 aaPredicted RBP2.58□□□□□ -2
VPS13D-203ENST00000466732 AGTR1P30556 359 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 CDKN2BP42772 138 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 PRLHRP49683 370 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 GNG4P50150 75 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 DAP3P51398 398 aaKnown RBP2.58□□□□□ -2
VPS13D-203ENST00000466732 POLR2HP52434 150 aaKnown RBP2.58□□□□□ -2
VPS13D-203ENST00000466732 RHOBP62745 196 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 SLC35A2P78381 396 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 NTHL1P78549 312 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 HSD52Q0P140 79 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 PJVKQ0ZLH3 352 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 CDKN3Q16667 212 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 SLC25A52Q3SY17 297 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 ATP6AP1LQ52LC2 224 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 BCL2L15Q5TBC7 163 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 OR2T2Q6IF00 324 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 AGTRAPQ6RW13 159 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 TBPL2Q6SJ96 375 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 GTF2H5Q6ZYL4 71 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 KRTAP5-5Q701N2 237 aaPredicted RBP2.58□□□□□ -2
VPS13D-203ENST00000466732 SLC25A26Q70HW3 274 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 H2AFVQ71UI9 128 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 NEGR1Q7Z3B1 354 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.58□□□□□ -2
VPS13D-203ENST00000466732 C20orf196Q8IYI0 205 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 TMEM123Q8N131 208 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 MUC15Q8N387 334 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 ZNF676Q8N7Q3 588 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 C5orf17Q8NAS9 161 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 INO80EQ8NBZ0 244 aaPredicted RBP2.58□□□□□ -2
VPS13D-203ENST00000466732 GPR26Q8NDV2 337 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 OR4F17Q8NGA8 305 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 OR10G9Q8NGN4 311 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 OR2Y1Q8NGV0 311 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 OR6N2Q8NGY6 317 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 OR13C6PQ8NH95 151 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 Q8WTZ3 238 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 DCUN1D4Q92564 292 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 RAB8BQ92930 207 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 IL22RA2Q969J5 263 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 TMEM106AQ96A25 262 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 APOBEC3DQ96AK3 386 aaPredicted RBP2.58□□□□□ -2
VPS13D-203ENST00000466732 FLYWCH2Q96CP2 140 aaKnown RBP2.58□□□□□ -2
VPS13D-203ENST00000466732 ZNF799Q96GE5 643 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 C16orf74Q96GX8 76 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 DNAJC30Q96LL9 226 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 YPEL4Q96NS1 127 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 CCDC115Q96NT0 180 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 CIB3Q96Q77 187 aaPredicted RBP2.58□□□□□ -2
VPS13D-203ENST00000466732 OR4F4Q96R69 305 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 GINS3Q9BRX5 216 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 APOOQ9BUR5 198 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 EFCAB11Q9BUY7 163 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 FAIM2Q9BWQ8 316 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 PECRQ9BY49 303 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 TMEM126AQ9H061 195 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 GTSF1LQ9H1H1 148 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 OR52D1Q9H346 318 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 PPDPFQ9H3Y8 114 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 ZDHHC11Q9H8X9 412 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 ELOVL3Q9HB03 270 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 HEBP1Q9NRV9 189 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 CLN6Q9NWW5 311 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 MED29Q9NX70 200 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 ZNF586Q9NXT0 402 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 GALPQ9UBC7 116 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 MMP17Q9ULZ9 603 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 V9GYY9 64 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 ARFGEF2Q9Y6D5 1785 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 SLX4Q8IY92 1834 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 PRG4Q92954 1404 aaPredicted RBP2.58□□□□□ -2
VPS13D-203ENST00000466732 SCN1AP35498 2009 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 CCDC88CQ9P219 2028 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 TJP1Q07157 1748 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 RGPD2P0DJD1 1756 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 KIDINS220Q9ULH0 1771 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 A0A0D9SFI3 127 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 IGHV1-69-2A0A0G2JMI3 117 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 KIR2DS1A0A191URI9 304 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 KBTBD11-OT1A0A1B0GTJ5 212 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 LOC100130705A0A1B0GUX0 176 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 A0A1W2PPV9 198 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 A0A1W2PRE2 83 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 TMEM89A2RUT3 159 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 TMEM189A5PLL7 270 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 MAP1LC3B2A6NCE7 125 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 IDSB3KWA1 339 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms