RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 NRGNQ92686 78 aa15.48■□□□□ 0.07
CAPN3-209ENST00000466222 RIMS4Q9H426 269 aaPredicted RBP15.48■□□□□ 0.07
CAPN3-209ENST00000466222 BIN3Q9NQY0 253 aa15.48■□□□□ 0.07
CAPN3-209ENST00000466222 LRRC30A6NM36 301 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 NAPSAO96009 420 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 F12P00748 615 aaPredicted RBP15.47■□□□□ 0.07
CAPN3-209ENST00000466222 TK1P04183 234 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 OR8U9P0C7N5 309 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 FOLR2P14207 255 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 COX6B1P14854 86 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 LMO1P25800 156 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 CAMLGP49069 296 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 ZNF295-AS1Q8N0V1 137 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 SLC35G3Q8N808 338 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 OR52M1Q8NGK5 317 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 OR8U1Q8NH10 309 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 CCL13Q99616 98 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 SPACA1Q9HBV2 294 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 WFDC1Q9HC57 220 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 OOEPA6NGQ2 149 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 MMP9P14780 707 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 OR3A1P47881 315 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 KCNJ3P48549 501 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 AESQ08117 197 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 ZNF266Q14584 549 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 IQCF2Q8IXL9 164 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 FGFRL1Q8N441 504 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 C15orf54Q8N8G6 183 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 ZNF565Q8N9K5 539 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 TP53RKQ96S44 253 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 RAB1BQ9H0U4 201 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 SAV1Q9H4B6 383 aaPredicted RBP15.47■□□□□ 0.07
CAPN3-209ENST00000466222 C11orf1Q9H5F2 150 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 C19orf12Q9NSK7 152 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 CACFD1Q9UGQ2 172 aa15.47■□□□□ 0.07
CAPN3-209ENST00000466222 CSMD1Q96PZ7 3565 aa15.46■□□□□ 0.07
CAPN3-209ENST00000466222 GCN1Q92616 2671 aaKnown RBP15.46■□□□□ 0.07
CAPN3-209ENST00000466222 A0A1B0GW64 132 aa15.46■□□□□ 0.07
CAPN3-209ENST00000466222 ZNF737O75373 536 aa15.46■□□□□ 0.07
CAPN3-209ENST00000466222 MIDNQ504T8 468 aa15.46■□□□□ 0.07
CAPN3-209ENST00000466222 TEX36Q5VZQ5 186 aa15.46■□□□□ 0.07
CAPN3-209ENST00000466222 STUMQ69YW2 141 aa15.46■□□□□ 0.07
CAPN3-209ENST00000466222 HIST2H2BCQ6DN03 193 aa15.46■□□□□ 0.07
CAPN3-209ENST00000466222 MRPL30Q8TCC3 161 aaKnown RBP15.46■□□□□ 0.07
CAPN3-209ENST00000466222 PBDC1Q9BVG4 233 aa15.46■□□□□ 0.07
CAPN3-209ENST00000466222 SLC25A31Q9H0C2 315 aa15.46■□□□□ 0.07
CAPN3-209ENST00000466222 SMDT1Q9H4I9 107 aa15.46■□□□□ 0.07
CAPN3-209ENST00000466222 AGPAT2O15120 278 aa15.45■□□□□ 0.06
CAPN3-209ENST00000466222 EWSR1Q01844 656 aaKnown RBP eCLIP15.45■□□□□ 0.06
CAPN3-209ENST00000466222 TLE4Q04727 773 aa15.45■□□□□ 0.06
CAPN3-209ENST00000466222 GUK1Q16774 197 aa15.45■□□□□ 0.06
CAPN3-209ENST00000466222 ZNF695Q8IW36 515 aa15.45■□□□□ 0.06
CAPN3-209ENST00000466222 OR2C3Q8N628 320 aa15.45■□□□□ 0.06
CAPN3-209ENST00000466222 FAM216BQ8N7L0 139 aa15.45■□□□□ 0.06
CAPN3-209ENST00000466222 IL22RA2Q969J5 263 aa15.45■□□□□ 0.06
CAPN3-209ENST00000466222 UBE2J1Q9Y385 318 aaPredicted RBP15.45■□□□□ 0.06
CAPN3-209ENST00000466222 PPIAL4EA0A075B759 164 aa15.45■□□□□ 0.06
CAPN3-209ENST00000466222 PPIAL4DF5H284 164 aa15.45■□□□□ 0.06
CAPN3-209ENST00000466222 IFNL4K9M1U5 179 aa15.45■□□□□ 0.06
CAPN3-209ENST00000466222 PPIAL4FP0DN26 164 aa15.45■□□□□ 0.06
CAPN3-209ENST00000466222 GNRHRP30968 328 aa15.45■□□□□ 0.06
CAPN3-209ENST00000466222 NKX2-1P43699 371 aaPredicted RBP15.45■□□□□ 0.06
CAPN3-209ENST00000466222 LYPD2Q6UXB3 125 aa15.45■□□□□ 0.06
CAPN3-209ENST00000466222 TBC1D26Q86UD7 250 aa15.45■□□□□ 0.06
CAPN3-209ENST00000466222 UBALD1Q8TB05 177 aa15.45■□□□□ 0.06
CAPN3-209ENST00000466222 BSCL2Q96G97 398 aaPredicted RBP15.45■□□□□ 0.06
CAPN3-209ENST00000466222 COQ2Q96H96 371 aa15.45■□□□□ 0.06
CAPN3-209ENST00000466222 PPIAL4AQ9Y536 164 aa15.45■□□□□ 0.06
CAPN3-209ENST00000466222 ARFGEF3Q5TH69 2177 aa15.45■□□□□ 0.06
CAPN3-209ENST00000466222 CHD3Q12873 2000 aaKnown RBP15.44■□□□□ 0.06
CAPN3-209ENST00000466222 AKAP6Q13023 2319 aa15.44■□□□□ 0.06
CAPN3-209ENST00000466222 TRBV6-6A0A0A6YYG2 114 aa15.44■□□□□ 0.06
CAPN3-209ENST00000466222 PITX3O75364 302 aa15.44■□□□□ 0.06
CAPN3-209ENST00000466222 TUSC2O75896 110 aa15.44■□□□□ 0.06
CAPN3-209ENST00000466222 GLIPR1P48060 266 aa15.44■□□□□ 0.06
CAPN3-209ENST00000466222 ZNF616Q08AN1 781 aa15.44■□□□□ 0.06
CAPN3-209ENST00000466222 EDDM3AQ14507 147 aa15.44■□□□□ 0.06
CAPN3-209ENST00000466222 IGSF11Q5DX21 431 aa15.44■□□□□ 0.06
CAPN3-209ENST00000466222 ZNF497Q6ZNH5 498 aa15.44■□□□□ 0.06
CAPN3-209ENST00000466222 AKR1E2Q96JD6 320 aa15.44■□□□□ 0.06
CAPN3-209ENST00000466222 GAFA1Q96PS6 74 aa15.44■□□□□ 0.06
CAPN3-209ENST00000466222 TUBA4BQ9H853 241 aa15.44■□□□□ 0.06
CAPN3-209ENST00000466222 UMAD1C9J7I0 102 aa15.43■□□□□ 0.06
CAPN3-209ENST00000466222 C9JQL5 133 aa15.43■□□□□ 0.06
CAPN3-209ENST00000466222 TMPRSS2O15393 492 aa15.43■□□□□ 0.06
CAPN3-209ENST00000466222 FCN3O75636 299 aa15.43■□□□□ 0.06
CAPN3-209ENST00000466222 DAOP14920 347 aa15.43■□□□□ 0.06
CAPN3-209ENST00000466222 NFYBP25208 207 aa15.43■□□□□ 0.06
CAPN3-209ENST00000466222 SELENOHQ8IZQ5 122 aaKnown RBP15.43■□□□□ 0.06
CAPN3-209ENST00000466222 C1orf87Q8N0U7 546 aa15.43■□□□□ 0.06
CAPN3-209ENST00000466222 RXFP4Q8TDU9 374 aa15.43■□□□□ 0.06
CAPN3-209ENST00000466222 DCTN5Q9BTE1 182 aa15.43■□□□□ 0.06
CAPN3-209ENST00000466222 SCRT1Q9BWW7 348 aa15.43■□□□□ 0.06
CAPN3-209ENST00000466222 PRH1P02810 166 aa15.43■□□□□ 0.06
CAPN3-209ENST00000466222 SCTP09683 121 aa15.43■□□□□ 0.06
CAPN3-209ENST00000466222 UCP1P25874 307 aa15.43■□□□□ 0.06
CAPN3-209ENST00000466222 S100GP29377 79 aa15.43■□□□□ 0.06
CAPN3-209ENST00000466222 SECTM1Q8WVN6 248 aa15.43■□□□□ 0.06
CAPN3-209ENST00000466222 COLCA2A8K830 154 aa15.42■□□□□ 0.06
CAPN3-209ENST00000466222 IFNA4P05014 189 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms