RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 DGCR14Q96DF8 476 aaKnown RBP14.15□□□□□ -0.14
COL7A1-205ENST00000465238 ABHD14BQ96IU4 210 aa14.15□□□□□ -0.14
COL7A1-205ENST00000465238 AGMATQ9BSE5 352 aa14.15□□□□□ -0.14
COL7A1-205ENST00000465238 SCPEP1Q9HB40 452 aa14.15□□□□□ -0.14
COL7A1-205ENST00000465238 RBM7Q9Y580 266 aaKnown RBP14.15□□□□□ -0.14
COL7A1-205ENST00000465238 NOTCH3Q9UM47 2321 aa14.14□□□□□ -0.15
COL7A1-205ENST00000465238 FAM90A9PA6NNJ1 464 aa14.14□□□□□ -0.15
COL7A1-205ENST00000465238 TPPPO94811 219 aa14.14□□□□□ -0.15
COL7A1-205ENST00000465238 SNRNP70P08621 437 aaKnown RBP14.14□□□□□ -0.15
COL7A1-205ENST00000465238 OR8U9P0C7N5 309 aa14.14□□□□□ -0.15
COL7A1-205ENST00000465238 VSIG10L2P0DP72 767 aa14.14□□□□□ -0.15
COL7A1-205ENST00000465238 GPR12P47775 334 aa14.14□□□□□ -0.15
COL7A1-205ENST00000465238 ZNF833PQ6ZTB9 187 aa14.14□□□□□ -0.15
COL7A1-205ENST00000465238 LAX1Q8IWV1 398 aa14.14□□□□□ -0.15
COL7A1-205ENST00000465238 H1FOOQ8IZA3 346 aaPredicted RBP14.14□□□□□ -0.15
COL7A1-205ENST00000465238 OR8U1Q8NH10 309 aa14.14□□□□□ -0.15
COL7A1-205ENST00000465238 DIRAS2Q96HU8 199 aa14.14□□□□□ -0.15
COL7A1-205ENST00000465238 AKR1E2Q96JD6 320 aa14.14□□□□□ -0.15
COL7A1-205ENST00000465238 IGHV3-72A0A0B4J1Y9 119 aa14.13□□□□□ -0.15
COL7A1-205ENST00000465238 DPPA5A6NC42 116 aa14.13□□□□□ -0.15
COL7A1-205ENST00000465238 SULT1C2O00338 296 aa14.13□□□□□ -0.15
COL7A1-205ENST00000465238 CD1BP29016 333 aa14.13□□□□□ -0.15
COL7A1-205ENST00000465238 HABP2Q14520 560 aaPredicted RBP14.13□□□□□ -0.15
COL7A1-205ENST00000465238 FAM71F2Q6NXP2 309 aa14.13□□□□□ -0.15
COL7A1-205ENST00000465238 C16orf82Q7Z2V1 217 aa14.13□□□□□ -0.15
COL7A1-205ENST00000465238 Q8N2B8 174 aa14.13□□□□□ -0.15
COL7A1-205ENST00000465238 GPX8Q8TED1 209 aa14.13□□□□□ -0.15
COL7A1-205ENST00000465238 ZNF702PQ9H963 129 aa14.13□□□□□ -0.15
COL7A1-205ENST00000465238 NECAP2Q9NVZ3 263 aa14.13□□□□□ -0.15
COL7A1-205ENST00000465238 G3V4G9 280 aa14.12□□□□□ -0.15
COL7A1-205ENST00000465238 IGKV1D-33P01593 117 aa14.12□□□□□ -0.15
COL7A1-205ENST00000465238 IGKV1-33P01594 117 aa14.12□□□□□ -0.15
COL7A1-205ENST00000465238 TMEM11P17152 192 aa14.12□□□□□ -0.15
COL7A1-205ENST00000465238 HNF4GQ14541 408 aa14.12□□□□□ -0.15
COL7A1-205ENST00000465238 BEAN1Q3B7T3 259 aa14.12□□□□□ -0.15
COL7A1-205ENST00000465238 RPL39P5Q59GN2 51 aa14.12□□□□□ -0.15
COL7A1-205ENST00000465238 OR5AP2Q8NGF4 316 aa14.12□□□□□ -0.15
COL7A1-205ENST00000465238 OR2T10Q8NGZ9 312 aa14.12□□□□□ -0.15
COL7A1-205ENST00000465238 RBM14Q96PK6 669 aaKnown RBP14.12□□□□□ -0.15
COL7A1-205ENST00000465238 SLC25A33Q9BSK2 321 aa14.12□□□□□ -0.15
COL7A1-205ENST00000465238 MRPL20Q9BYC9 149 aaKnown RBP14.12□□□□□ -0.15
COL7A1-205ENST00000465238 NXF2Q9GZY0 626 aaKnown RBP14.12□□□□□ -0.15
COL7A1-205ENST00000465238 SERTAD4Q9NUC0 356 aa14.12□□□□□ -0.15
COL7A1-205ENST00000465238 FBXO24O75426 580 aa14.11□□□□□ -0.15
COL7A1-205ENST00000465238 OR2F2O95006 317 aa14.11□□□□□ -0.15
COL7A1-205ENST00000465238 NFYAP23511 347 aaPredicted RBP14.11□□□□□ -0.15
COL7A1-205ENST00000465238 LUMP51884 338 aaPredicted RBP14.11□□□□□ -0.15
COL7A1-205ENST00000465238 CDK10Q15131 360 aa14.11□□□□□ -0.15
COL7A1-205ENST00000465238 KPRPQ5T749 579 aaPredicted RBP14.11□□□□□ -0.15
COL7A1-205ENST00000465238 SAMD5Q5TGI4 173 aa14.11□□□□□ -0.15
COL7A1-205ENST00000465238 HIST2H2BDQ6DRA6 164 aa14.11□□□□□ -0.15
COL7A1-205ENST00000465238 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.11□□□□□ -0.15
COL7A1-205ENST00000465238 SNAPC3Q92966 411 aa14.11□□□□□ -0.15
COL7A1-205ENST00000465238 NABP2Q9BQ15 211 aa14.11□□□□□ -0.15
COL7A1-205ENST00000465238 ZNF251Q9BRH9 671 aa14.11□□□□□ -0.15
COL7A1-205ENST00000465238 PRSS22Q9GZN4 317 aa14.11□□□□□ -0.15
COL7A1-205ENST00000465238 OR2D2Q9H210 308 aa14.11□□□□□ -0.15
COL7A1-205ENST00000465238 RABL2AQ9UBK7 228 aaPredicted RBP14.11□□□□□ -0.15
COL7A1-205ENST00000465238 ANAPC10Q9UM13 185 aa14.11□□□□□ -0.15
COL7A1-205ENST00000465238 RABL2BQ9UNT1 228 aa14.11□□□□□ -0.15
COL7A1-205ENST00000465238 OR2W1Q9Y3N9 320 aa14.11□□□□□ -0.15
COL7A1-205ENST00000465238 J3QRK9 145 aa14.1□□□□□ -0.15
COL7A1-205ENST00000465238 MOSP00540 346 aa14.1□□□□□ -0.15
COL7A1-205ENST00000465238 OR5H8P0DN80 308 aa14.1□□□□□ -0.15
COL7A1-205ENST00000465238 NAT1P18440 290 aa14.1□□□□□ -0.15
COL7A1-205ENST00000465238 TAS2R46P59540 309 aa14.1□□□□□ -0.15
COL7A1-205ENST00000465238 LSAMPQ13449 338 aa14.1□□□□□ -0.15
COL7A1-205ENST00000465238 EBI3Q14213 229 aa14.1□□□□□ -0.15
COL7A1-205ENST00000465238 OR5H2Q8NGV7 314 aa14.1□□□□□ -0.15
COL7A1-205ENST00000465238 FCAMRQ8WWV6 532 aa14.1□□□□□ -0.15
COL7A1-205ENST00000465238 EAF1Q96JC9 268 aaPredicted RBP14.1□□□□□ -0.15
COL7A1-205ENST00000465238 ABHD1Q96SE0 405 aa14.1□□□□□ -0.15
COL7A1-205ENST00000465238 GAB2Q9UQC2 676 aa14.1□□□□□ -0.15
COL7A1-205ENST00000465238 A3GALT2U3KPV4 340 aa14.1□□□□□ -0.15
COL7A1-205ENST00000465238 ZNF736B4DX44 427 aaPredicted RBP14.09□□□□□ -0.15
COL7A1-205ENST00000465238 M0R1X1 148 aa14.09□□□□□ -0.15
COL7A1-205ENST00000465238 CT45A6P0DMU7 189 aa14.09□□□□□ -0.15
COL7A1-205ENST00000465238 CT45A5P0DMU8 189 aa14.09□□□□□ -0.15
COL7A1-205ENST00000465238 CT45A7P0DMV0 189 aa14.09□□□□□ -0.15
COL7A1-205ENST00000465238 FCGR2CP31995 323 aa14.09□□□□□ -0.15
COL7A1-205ENST00000465238 TNFSF8P32971 234 aa14.09□□□□□ -0.15
COL7A1-205ENST00000465238 S100A5P33763 92 aa14.09□□□□□ -0.15
COL7A1-205ENST00000465238 RCVRNP35243 200 aa14.09□□□□□ -0.15
COL7A1-205ENST00000465238 IL18Q14116 193 aa14.09□□□□□ -0.15
COL7A1-205ENST00000465238 FBLN7Q53RD9 439 aa14.09□□□□□ -0.15
COL7A1-205ENST00000465238 RNASE12Q5GAN4 147 aaKnown RBP14.09□□□□□ -0.15
COL7A1-205ENST00000465238 PYHIN1Q6K0P9 492 aa14.09□□□□□ -0.15
COL7A1-205ENST00000465238 M0QZK8 103 aa14.08□□□□□ -0.16
COL7A1-205ENST00000465238 PEX14O75381 377 aa14.08□□□□□ -0.16
COL7A1-205ENST00000465238 RBBP9O75884 186 aa14.08□□□□□ -0.16
COL7A1-205ENST00000465238 PMP2P02689 132 aa14.08□□□□□ -0.16
COL7A1-205ENST00000465238 HLA-DMAP28067 261 aa14.08□□□□□ -0.16
COL7A1-205ENST00000465238 MC5RP33032 325 aa14.08□□□□□ -0.16
COL7A1-205ENST00000465238 MRPS10P82664 201 aaKnown RBP14.08□□□□□ -0.16
COL7A1-205ENST00000465238 NSUN5P1Q3KNT7 163 aa14.08□□□□□ -0.16
COL7A1-205ENST00000465238 GLDNQ6ZMI3 551 aaPredicted RBP14.08□□□□□ -0.16
COL7A1-205ENST00000465238 REC114Q7Z4M0 266 aa14.08□□□□□ -0.16
COL7A1-205ENST00000465238 NDUFA11Q86Y39 141 aa14.08□□□□□ -0.16
COL7A1-205ENST00000465238 LYSMD2Q8IV50 215 aa14.08□□□□□ -0.16
COL7A1-205ENST00000465238 DRAXINQ8NBI3 349 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms