RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 HIST1H3AP68431 136 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 H3F3AP84243 136 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 IFITM2Q01629 132 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 SCGB1D4Q6XE38 83 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 Q6ZTC4 211 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 HIST2H3AQ71DI3 136 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 ZNF101Q8IZC7 436 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 ZNF567Q8N184 647 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 YIPF7Q8N8F6 280 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 CENPHQ9H3R5 247 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 PRR34Q9NV39 138 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 TBX21Q9UL17 535 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 CASP8AP2Q9UKL3 1982 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 EVPLLA8MZ36 301 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 H3BQV1 296 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 CA11O75493 328 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 OR2B3O76000 313 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 ATP6V1G2O95670 118 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 HLA-DQA1P01909 254 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 IL6P05231 212 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 RPS12P25398 132 aaKnown RBP1.91□□□□□ -2.1
SMC4-203ENST00000462668 IMPA1P29218 277 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 OMPP47874 163 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 OR1E2P47887 323 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 CCL23P55773 120 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 KRTAP1-1Q07627 177 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 ZNF678Q5SXM1 525 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 C1orf195Q5TG92 126 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 COQ8AQ8NI60 647 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 DCUN1D4Q92564 292 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 PPP1R36Q96LQ0 422 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 MAGEB18Q96M61 343 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 ASH1LQ9NR48 2969 aaKnown RBP1.91□□□□□ -2.1
SMC4-203ENST00000462668 ZNF391Q9UJN7 358 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 PRELID1Q9Y255 219 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 FANCMQ8IYD8 2048 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 IGHV1-45A0A0A0MS14 117 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 LOC105371267A0A1B0GV96 52 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 KLRC4O43908 158 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 TTRP02766 147 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 ZNF823P16415 610 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 CXCL3P19876 107 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 CFL1P23528 166 aaKnown RBP1.91□□□□□ -2.1
SMC4-203ENST00000462668 MARCKSL1P49006 195 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 MP68P56378 58 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 PPP1CAP62136 330 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 MMDQ15546 238 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 ALX1Q15699 326 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 RSBN1Q5VWQ0 802 aaPredicted RBP1.91□□□□□ -2.1
SMC4-203ENST00000462668 NCCRP1Q6ZVX7 275 aaPredicted RBP1.91□□□□□ -2.1
SMC4-203ENST00000462668 TRAPPC5Q8IUR0 188 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 ZNF584Q8IVC4 421 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 C12orf45Q8N5I9 185 aaPredicted RBP1.91□□□□□ -2.1
SMC4-203ENST00000462668 SLC7A10Q9NS82 523 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 DMAC2Q9NW81 257 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 ZNRD1Q9P1U0 126 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 TENM4Q6N022 2769 aa1.91□□□□□ -2.1
SMC4-203ENST00000462668 KIF26AQ9ULI4 1882 aaPredicted RBP1.9□□□□□ -2.1
SMC4-203ENST00000462668 GATBO75879 557 aaKnown RBP1.9□□□□□ -2.1
SMC4-203ENST00000462668 APCSP02743 223 aa1.9□□□□□ -2.1
SMC4-203ENST00000462668 FGF12P61328 243 aa1.9□□□□□ -2.1
SMC4-203ENST00000462668 TIMM10P62072 90 aa1.9□□□□□ -2.1
SMC4-203ENST00000462668 SMAGPQ0VAQ4 97 aa1.9□□□□□ -2.1
SMC4-203ENST00000462668 PPP1R1AQ13522 171 aa1.9□□□□□ -2.1
SMC4-203ENST00000462668 OR1J4Q8NGS1 313 aa1.9□□□□□ -2.1
SMC4-203ENST00000462668 OR2V2Q96R30 315 aa1.9□□□□□ -2.1
SMC4-203ENST00000462668 THTPAQ9BU02 230 aa1.9□□□□□ -2.1
SMC4-203ENST00000462668 NUDT9Q9BW91 350 aa1.9□□□□□ -2.1
SMC4-203ENST00000462668 TMEM216Q9P0N5 145 aa1.9□□□□□ -2.1
SMC4-203ENST00000462668 POLR1DQ9Y2S0 133 aa1.9□□□□□ -2.1
SMC4-203ENST00000462668 MRPS16Q9Y3D3 137 aaKnown RBP1.9□□□□□ -2.1
SMC4-203ENST00000462668 CMYA5Q8N3K9 4069 aa1.9□□□□□ -2.1
SMC4-203ENST00000462668 ANKRD30AQ9BXX3 1397 aa1.9□□□□□ -2.1
SMC4-203ENST00000462668 TRIM49D1C9J1S8 452 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 GABRA1P14867 456 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 CXCL12P48061 93 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 TNFAIP6P98066 277 aaPredicted RBP1.9□□□□□ -2.11
SMC4-203ENST00000462668 FABP5Q01469 135 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 MPPED2Q15777 294 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 MRPL2Q5T653 305 aaKnown RBP1.9□□□□□ -2.11
SMC4-203ENST00000462668 OR1L8Q8NGR8 309 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 OR11L1Q8NGX0 322 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 OR6K3Q8NGY3 331 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 TMEM158Q8WZ71 300 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 OR52E6Q96RD3 313 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 MROQ9BYG7 248 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 ANGPT4Q9Y264 503 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 TMEM14AQ9Y6G1 99 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 ITPR1Q14643 2758 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 NID2Q14112 1375 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 A0A1B0GUA9 196 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 PINLYPA6NC86 204 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 F5H5P2 479 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 LHBP01229 141 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 CISD3P0C7P0 127 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 CGB3P0DN86 165 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 CGB7P0DN87 165 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 ATF1P18846 271 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 CDK2P24941 298 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 CCR7P32248 378 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms