RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 FAM71F2Q6NXP2 309 aa9.05□□□□□ -0.96
SSBP1-202ENST00000461433 TGIF2LXQ8IUE1 241 aa9.05□□□□□ -0.96
SSBP1-202ENST00000461433 NABP2Q9BQ15 211 aa9.05□□□□□ -0.96
SSBP1-202ENST00000461433 DPAGT1Q9H3H5 408 aa9.05□□□□□ -0.96
SSBP1-202ENST00000461433 TNFRSF19Q9NS68 423 aa9.05□□□□□ -0.96
SSBP1-202ENST00000461433 SDHAF2Q9NX18 166 aa9.05□□□□□ -0.96
SSBP1-202ENST00000461433 CSF1P09603 554 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 ZNF735P0CB33 412 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 CT45A6P0DMU7 189 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 CT45A5P0DMU8 189 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 CT45A7P0DMV0 189 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 TBPP20226 339 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 GPR12P47775 334 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 BAK1Q16611 211 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 ACTBL2Q562R1 376 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 STEAP1BQ6NZ63 245 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 MOB3BQ86TA1 216 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.04□□□□□ -0.96
SSBP1-202ENST00000461433 OR56B4Q8NH76 319 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 OR5R1Q8NH85 324 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 JMJD8Q96S16 334 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 ZNF2Q9BSG1 426 aaPredicted RBP9.04□□□□□ -0.96
SSBP1-202ENST00000461433 MRPL20Q9BYC9 149 aaKnown RBP9.04□□□□□ -0.96
SSBP1-202ENST00000461433 ZNF221Q9UK13 617 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 VPREB3Q9UKI3 123 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 JMJD1CQ15652 2540 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 IGHV3-72A0A0B4J1Y9 119 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 A6NDX4 124 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 TXNL1O43396 289 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 RNASE1P07998 156 aaKnown RBP9.04□□□□□ -0.96
SSBP1-202ENST00000461433 BRS3P32247 399 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 LSAMPQ13449 338 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 EIF4EBP1Q13541 118 aaPredicted RBP9.04□□□□□ -0.96
SSBP1-202ENST00000461433 KLF9Q13886 244 aaPredicted RBP9.04□□□□□ -0.96
SSBP1-202ENST00000461433 EBI3Q14213 229 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 LY6EQ16553 131 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 RNASE10Q5GAN6 216 aaKnown RBP9.04□□□□□ -0.96
SSBP1-202ENST00000461433 AADACL3Q5VUY0 350 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 FAAP20Q6NZ36 180 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 LHFPL1Q86WI0 220 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 THNSL2Q86YJ6 484 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 ZNF645Q8N7E2 425 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 GDPD1Q8N9F7 314 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 DRAXINQ8NBI3 349 aaPredicted RBP9.04□□□□□ -0.96
SSBP1-202ENST00000461433 OR6F1Q8NGZ6 308 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 MOB3AQ96BX8 217 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 S1PR3Q99500 378 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 ABCB10Q9NRK6 738 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 TAS2R8Q9NYW2 309 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 TCF19Q9Y242 345 aa9.04□□□□□ -0.96
SSBP1-202ENST00000461433 RBM7Q9Y580 266 aaKnown RBP9.04□□□□□ -0.96
SSBP1-202ENST00000461433 OR5H14A6NHG9 310 aa9.03□□□□□ -0.96
SSBP1-202ENST00000461433 CHST1O43916 411 aa9.03□□□□□ -0.96
SSBP1-202ENST00000461433 RAB3DO95716 219 aa9.03□□□□□ -0.96
SSBP1-202ENST00000461433 SNRNP70P08621 437 aaKnown RBP9.03□□□□□ -0.96
SSBP1-202ENST00000461433 AKAIN1P0CW23 69 aa9.03□□□□□ -0.96
SSBP1-202ENST00000461433 CD1BP29016 333 aa9.03□□□□□ -0.96
SSBP1-202ENST00000461433 ZNF383Q8NA42 475 aa9.03□□□□□ -0.96
SSBP1-202ENST00000461433 OR4C16Q8NGL9 310 aa9.03□□□□□ -0.96
SSBP1-202ENST00000461433 SECTM1Q8WVN6 248 aa9.03□□□□□ -0.96
SSBP1-202ENST00000461433 MRGPRFQ96AM1 343 aa9.03□□□□□ -0.96
SSBP1-202ENST00000461433 FXYD6Q9H0Q3 95 aa9.03□□□□□ -0.96
SSBP1-202ENST00000461433 CCL28Q9NRJ3 127 aa9.03□□□□□ -0.96
SSBP1-202ENST00000461433 M0R1X1 148 aa9.02□□□□□ -0.97
SSBP1-202ENST00000461433 IGKV1D-33P01593 117 aa9.02□□□□□ -0.97
SSBP1-202ENST00000461433 IGKV1-33P01594 117 aa9.02□□□□□ -0.97
SSBP1-202ENST00000461433 GNRHRP30968 328 aa9.02□□□□□ -0.97
SSBP1-202ENST00000461433 ARHGDIBP52566 201 aa9.02□□□□□ -0.97
SSBP1-202ENST00000461433 FXYD4P59646 89 aa9.02□□□□□ -0.97
SSBP1-202ENST00000461433 TSPAN5P62079 268 aa9.02□□□□□ -0.97
SSBP1-202ENST00000461433 C16orf87Q6PH81 154 aa9.02□□□□□ -0.97
SSBP1-202ENST00000461433 GLDNQ6ZMI3 551 aaPredicted RBP9.02□□□□□ -0.97
SSBP1-202ENST00000461433 TMEM219Q86XT9 240 aa9.02□□□□□ -0.97
SSBP1-202ENST00000461433 ARRDC1Q8N5I2 433 aa9.02□□□□□ -0.97
SSBP1-202ENST00000461433 Q8N6K4 173 aa9.02□□□□□ -0.97
SSBP1-202ENST00000461433 OR5AN1Q8NGI8 311 aa9.02□□□□□ -0.97
SSBP1-202ENST00000461433 CAPSLQ8WWF8 208 aa9.02□□□□□ -0.97
SSBP1-202ENST00000461433 RITA1Q96K30 269 aa9.02□□□□□ -0.97
SSBP1-202ENST00000461433 SLC5A7Q9GZV3 580 aa9.02□□□□□ -0.97
SSBP1-202ENST00000461433 FBN1P35555 2871 aaKnown RBP9.01□□□□□ -0.97
SSBP1-202ENST00000461433 BTBD17A6NE02 478 aa9.01□□□□□ -0.97
SSBP1-202ENST00000461433 FAM181BA6NEQ2 426 aa9.01□□□□□ -0.97
SSBP1-202ENST00000461433 LINC00473A8K010 186 aa9.01□□□□□ -0.97
SSBP1-202ENST00000461433 H0YJW9 148 aa9.01□□□□□ -0.97
SSBP1-202ENST00000461433 TRIM77I1YAP6 450 aa9.01□□□□□ -0.97
SSBP1-202ENST00000461433 GPR137BO60478 399 aa9.01□□□□□ -0.97
SSBP1-202ENST00000461433 SLC22A5O76082 557 aa9.01□□□□□ -0.97
SSBP1-202ENST00000461433 AMY2AP04746 511 aa9.01□□□□□ -0.97
SSBP1-202ENST00000461433 FAM106CPP0CH98 169 aa9.01□□□□□ -0.97
SSBP1-202ENST00000461433 DUTP33316 252 aaKnown RBP9.01□□□□□ -0.97
SSBP1-202ENST00000461433 HERV-K104P61576 105 aa9.01□□□□□ -0.97
SSBP1-202ENST00000461433 MEF2DQ14814 521 aa9.01□□□□□ -0.97
SSBP1-202ENST00000461433 MSMO1Q15800 293 aa9.01□□□□□ -0.97
SSBP1-202ENST00000461433 ZNF818PQ6ZRF7 136 aa9.01□□□□□ -0.97
SSBP1-202ENST00000461433 TMEM17Q86X19 198 aa9.01□□□□□ -0.97
SSBP1-202ENST00000461433 S100ZQ8WXG8 99 aa9.01□□□□□ -0.97
SSBP1-202ENST00000461433 DDB2Q92466 427 aa9.01□□□□□ -0.97
SSBP1-202ENST00000461433 TAF15Q92804 592 aaKnown RBP eCLIP9.01□□□□□ -0.97
SSBP1-202ENST00000461433 EAF1Q96JC9 268 aaPredicted RBP9.01□□□□□ -0.97
SSBP1-202ENST00000461433 GPHA2Q96T91 129 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms