RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 LOC102723971A0A1B0GUV8 181 aa12.65□□□□□ -0.38
PTPRU-205ENST00000460170 PPIAL4DF5H284 164 aa12.65□□□□□ -0.38
PTPRU-205ENST00000460170 MPDU1O75352 247 aa12.65□□□□□ -0.38
PTPRU-205ENST00000460170 PPIAL4FP0DN26 164 aa12.65□□□□□ -0.38
PTPRU-205ENST00000460170 CCKARP32238 428 aa12.65□□□□□ -0.38
PTPRU-205ENST00000460170 OR5P3Q8WZ94 311 aa12.65□□□□□ -0.38
PTPRU-205ENST00000460170 CCL13Q99616 98 aa12.65□□□□□ -0.38
PTPRU-205ENST00000460170 TIMP4Q99727 224 aa12.65□□□□□ -0.38
PTPRU-205ENST00000460170 ZNF703Q9H7S9 590 aaPredicted RBP12.65□□□□□ -0.38
PTPRU-205ENST00000460170 AURKAIP1Q9NWT8 199 aaPredicted RBP12.65□□□□□ -0.38
PTPRU-205ENST00000460170 PPIAL4AQ9Y536 164 aa12.65□□□□□ -0.38
PTPRU-205ENST00000460170 MMP7P09237 267 aaPredicted RBP12.65□□□□□ -0.38
PTPRU-205ENST00000460170 AMTP48728 403 aa12.65□□□□□ -0.38
PTPRU-205ENST00000460170 ITLN1Q8WWA0 313 aa12.65□□□□□ -0.38
PTPRU-205ENST00000460170 SLC25A28Q96A46 364 aa12.65□□□□□ -0.38
PTPRU-205ENST00000460170 ZNF837Q96EG3 531 aaPredicted RBP12.65□□□□□ -0.38
PTPRU-205ENST00000460170 GALNT14Q96FL9 552 aa12.65□□□□□ -0.38
PTPRU-205ENST00000460170 FOXJ2Q9P0K8 574 aa12.65□□□□□ -0.38
PTPRU-205ENST00000460170 ODAMA1E959 279 aa12.65□□□□□ -0.38
PTPRU-205ENST00000460170 J3QW42 95 aa12.65□□□□□ -0.38
PTPRU-205ENST00000460170 K7N7A8 449 aa12.65□□□□□ -0.38
PTPRU-205ENST00000460170 SRSF10O75494 262 aaKnown RBP12.65□□□□□ -0.38
PTPRU-205ENST00000460170 OR4X1Q8NH49 305 aa12.65□□□□□ -0.38
PTPRU-205ENST00000460170 MIOXQ9UGB7 285 aa12.65□□□□□ -0.38
PTPRU-205ENST00000460170 RALGAPA1Q6GYQ0 2036 aa12.65□□□□□ -0.38
PTPRU-205ENST00000460170 EP300Q09472 2414 aaPredicted RBP12.65□□□□□ -0.38
PTPRU-205ENST00000460170 CYB5R3P00387 301 aaPredicted RBP12.64□□□□□ -0.39
PTPRU-205ENST00000460170 ACP1P24666 158 aa12.64□□□□□ -0.39
PTPRU-205ENST00000460170 ATP1A1-AS1Q5TC04 95 aa12.64□□□□□ -0.39
PTPRU-205ENST00000460170 DHRS11Q6UWP2 260 aa12.64□□□□□ -0.39
PTPRU-205ENST00000460170 GCSAMQ8N6F7 178 aa12.64□□□□□ -0.39
PTPRU-205ENST00000460170 LSM10Q969L4 123 aaKnown RBP12.64□□□□□ -0.39
PTPRU-205ENST00000460170 SIGLEC12Q96PQ1 595 aa12.64□□□□□ -0.39
PTPRU-205ENST00000460170 RTBDNQ9BSG5 229 aaPredicted RBP12.64□□□□□ -0.39
PTPRU-205ENST00000460170 RNF222A6NCQ9 220 aa12.64□□□□□ -0.39
PTPRU-205ENST00000460170 GDF9O60383 454 aa12.64□□□□□ -0.39
PTPRU-205ENST00000460170 OR8B3Q8NGG8 313 aa12.64□□□□□ -0.39
PTPRU-205ENST00000460170 OR8B2Q96RD0 313 aa12.64□□□□□ -0.39
PTPRU-205ENST00000460170 ZNF253O75346 499 aa12.64□□□□□ -0.39
PTPRU-205ENST00000460170 KLK2P20151 261 aa12.64□□□□□ -0.39
PTPRU-205ENST00000460170 PXMP4Q9Y6I8 212 aa12.64□□□□□ -0.39
PTPRU-205ENST00000460170 TRAV14DV4A0A0A6YYC5 116 aa12.64□□□□□ -0.39
PTPRU-205ENST00000460170 FAM157AC9JC47 383 aa12.64□□□□□ -0.39
PTPRU-205ENST00000460170 HOXD4P09016 255 aaPredicted RBP12.64□□□□□ -0.39
PTPRU-205ENST00000460170 CELA3AP09093 270 aa12.64□□□□□ -0.39
PTPRU-205ENST00000460170 RND3P61587 244 aa12.64□□□□□ -0.39
PTPRU-205ENST00000460170 TMEM183BQ1AE95 376 aa12.64□□□□□ -0.39
PTPRU-205ENST00000460170 IZUMO4Q1ZYL8 232 aa12.64□□□□□ -0.39
PTPRU-205ENST00000460170 IGLV3-32A0A0A0MS00 114 aa12.64□□□□□ -0.39
PTPRU-205ENST00000460170 UMODP07911 640 aa12.64□□□□□ -0.39
PTPRU-205ENST00000460170 FHITP49789 147 aa12.64□□□□□ -0.39
PTPRU-205ENST00000460170 HNRNPA3P51991 378 aaKnown RBP12.64□□□□□ -0.39
PTPRU-205ENST00000460170 TNFRSF9Q07011 255 aa12.64□□□□□ -0.39
PTPRU-205ENST00000460170 C10orf113Q5VZT2 155 aa12.64□□□□□ -0.39
PTPRU-205ENST00000460170 SSX8Q7RTT4 187 aa12.64□□□□□ -0.39
PTPRU-205ENST00000460170 C16orf82Q7Z2V1 217 aa12.64□□□□□ -0.39
PTPRU-205ENST00000460170 SHISA5Q8N114 240 aa12.64□□□□□ -0.39
PTPRU-205ENST00000460170 A0A1W2PRD5 423 aa12.63□□□□□ -0.39
PTPRU-205ENST00000460170 A0A1W2PRF3 423 aa12.63□□□□□ -0.39
PTPRU-205ENST00000460170 A0A1W2PRM7 423 aa12.63□□□□□ -0.39
PTPRU-205ENST00000460170 REG1BP48304 166 aa12.63□□□□□ -0.39
PTPRU-205ENST00000460170 NRN1LQ496H8 165 aa12.63□□□□□ -0.39
PTPRU-205ENST00000460170 CALHM1Q8IU99 346 aa12.63□□□□□ -0.39
PTPRU-205ENST00000460170 NAT2P11245 290 aa12.63□□□□□ -0.39
PTPRU-205ENST00000460170 STXBP6Q8NFX7 210 aa12.63□□□□□ -0.39
PTPRU-205ENST00000460170 YTHDF2Q9Y5A9 579 aaKnown RBP12.63□□□□□ -0.39
PTPRU-205ENST00000460170 LOC102723996A0A087X1L8 192 aa12.63□□□□□ -0.39
PTPRU-205ENST00000460170 MPTX1A8MV57 137 aa12.63□□□□□ -0.39
PTPRU-205ENST00000460170 A8MXK9 166 aa12.63□□□□□ -0.39
PTPRU-205ENST00000460170 H0YL77 283 aa12.63□□□□□ -0.39
PTPRU-205ENST00000460170 FREM3P0C091 2139 aa12.63□□□□□ -0.39
PTPRU-205ENST00000460170 G0S2P27469 103 aa12.63□□□□□ -0.39
PTPRU-205ENST00000460170 PTGDSP41222 190 aa12.63□□□□□ -0.39
PTPRU-205ENST00000460170 CFHR1Q03591 330 aa12.63□□□□□ -0.39
PTPRU-205ENST00000460170 A0A0G2JMM0 328 aa12.63□□□□□ -0.39
PTPRU-205ENST00000460170 A0A1W2PPB8 328 aa12.63□□□□□ -0.39
PTPRU-205ENST00000460170 A0A1W2PRS3 328 aa12.63□□□□□ -0.39
PTPRU-205ENST00000460170 KIR3DP1A8MWS1 328 aa12.63□□□□□ -0.39
PTPRU-205ENST00000460170 HTR1DP28221 377 aa12.63□□□□□ -0.39
PTPRU-205ENST00000460170 KRTCAP3Q53RY4 240 aa12.63□□□□□ -0.39
PTPRU-205ENST00000460170 LILRB1Q8NHL6 650 aaPredicted RBP12.63□□□□□ -0.39
PTPRU-205ENST00000460170 MED12Q93074 2177 aa12.62□□□□□ -0.39
PTPRU-205ENST00000460170 RARRES2Q99969 163 aa12.62□□□□□ -0.39
PTPRU-205ENST00000460170 LNP1A1A4G5 178 aa12.62□□□□□ -0.39
PTPRU-205ENST00000460170 KHDC1LQ5JSQ8 128 aa12.62□□□□□ -0.39
PTPRU-205ENST00000460170 DIRC2Q96SL1 478 aa12.62□□□□□ -0.39
PTPRU-205ENST00000460170 GP6Q9HCN6 339 aa12.62□□□□□ -0.39
PTPRU-205ENST00000460170 RPL29P47914 159 aaKnown RBP12.62□□□□□ -0.39
PTPRU-205ENST00000460170 SSX7Q7RTT5 188 aa12.62□□□□□ -0.39
PTPRU-205ENST00000460170 DRAM1Q8N682 238 aa12.62□□□□□ -0.39
PTPRU-205ENST00000460170 FAM122AQ96E09 287 aa12.62□□□□□ -0.39
PTPRU-205ENST00000460170 PERPQ96FX8 193 aa12.62□□□□□ -0.39
PTPRU-205ENST00000460170 P2RX4Q99571 388 aa12.62□□□□□ -0.39
PTPRU-205ENST00000460170 C1QTNF5Q9BXJ0 243 aa12.62□□□□□ -0.39
PTPRU-205ENST00000460170 THSD7BQ9C0I4 1608 aa12.62□□□□□ -0.39
PTPRU-205ENST00000460170 ZNF883P0CG24 379 aa12.62□□□□□ -0.39
PTPRU-205ENST00000460170 USF1P22415 310 aaPredicted RBP12.62□□□□□ -0.39
PTPRU-205ENST00000460170 HLA-DRB5Q30154 266 aa12.62□□□□□ -0.39
PTPRU-205ENST00000460170 SGMS2Q8NHU3 365 aa12.62□□□□□ -0.39
PTPRU-205ENST00000460170 SMIM8Q96KF7 97 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 179.1 ms