RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 SPATA45Q537H7 98 aa7.78□□□□□ -1.16
SHROOM4-203ENST00000460112 FAM90A10PA6NDY2 464 aa7.78□□□□□ -1.16
SHROOM4-203ENST00000460112 FAM90A18PA6NE21 464 aa7.78□□□□□ -1.16
SHROOM4-203ENST00000460112 FAM90A16PA6NEW6 464 aa7.78□□□□□ -1.16
SHROOM4-203ENST00000460112 FAM90A20PA6NIJ5 464 aa7.78□□□□□ -1.16
SHROOM4-203ENST00000460112 FAM90A8PA6NJQ4 464 aa7.78□□□□□ -1.16
SHROOM4-203ENST00000460112 FAM90A7PA6NKC0 464 aa7.78□□□□□ -1.16
SHROOM4-203ENST00000460112 FAM90A22PA8MWA6 464 aa7.78□□□□□ -1.16
SHROOM4-203ENST00000460112 FAM90A12PA8MX19 464 aa7.78□□□□□ -1.16
SHROOM4-203ENST00000460112 FAM90A5PA8MXJ8 464 aa7.78□□□□□ -1.16
SHROOM4-203ENST00000460112 FAM90A23PA8MXZ1 464 aa7.78□□□□□ -1.16
SHROOM4-203ENST00000460112 HLA-DQA1P01909 254 aa7.78□□□□□ -1.16
SHROOM4-203ENST00000460112 FAM90A15PP0C7V4 464 aa7.78□□□□□ -1.16
SHROOM4-203ENST00000460112 FAM90A13PP0C7W8 464 aa7.78□□□□□ -1.16
SHROOM4-203ENST00000460112 FAM90A14PP0C7W9 464 aa7.78□□□□□ -1.16
SHROOM4-203ENST00000460112 FAM90A24PP0C7X0 464 aa7.78□□□□□ -1.16
SHROOM4-203ENST00000460112 ZFP36L2P47974 494 aaKnown RBP7.78□□□□□ -1.16
SHROOM4-203ENST00000460112 FBXW9Q5XUX1 488 aa7.78□□□□□ -1.16
SHROOM4-203ENST00000460112 GLCCI1Q86VQ1 547 aa7.78□□□□□ -1.16
SHROOM4-203ENST00000460112 MAP1LC3AQ9H492 121 aa7.78□□□□□ -1.16
SHROOM4-203ENST00000460112 B4GALNT1Q00973 533 aa7.78□□□□□ -1.16
SHROOM4-203ENST00000460112 DNLZQ5SXM8 178 aa7.78□□□□□ -1.16
SHROOM4-203ENST00000460112 DMRTA1Q5VZB9 504 aa7.78□□□□□ -1.16
SHROOM4-203ENST00000460112 PRNTQ86SH4 94 aa7.78□□□□□ -1.16
SHROOM4-203ENST00000460112 C9orf62Q8N4C0 152 aa7.78□□□□□ -1.16
SHROOM4-203ENST00000460112 PRDM14Q9GZV8 571 aa7.78□□□□□ -1.16
SHROOM4-203ENST00000460112 TSPAN7P41732 249 aa7.78□□□□□ -1.16
SHROOM4-203ENST00000460112 MMP16P51512 607 aa7.78□□□□□ -1.16
SHROOM4-203ENST00000460112 NLRC5Q86WI3 1866 aa7.77□□□□□ -1.16
SHROOM4-203ENST00000460112 J3QR06 171 aa7.77□□□□□ -1.16
SHROOM4-203ENST00000460112 SLC17A3O00476 420 aa7.77□□□□□ -1.16
SHROOM4-203ENST00000460112 DLL1O00548 723 aa7.77□□□□□ -1.16
SHROOM4-203ENST00000460112 NUDT3O95989 172 aa7.77□□□□□ -1.16
SHROOM4-203ENST00000460112 PPYP01298 95 aa7.77□□□□□ -1.16
SHROOM4-203ENST00000460112 PF4V1P10720 104 aa7.77□□□□□ -1.16
SHROOM4-203ENST00000460112 C2orf88Q9BSF0 95 aa7.77□□□□□ -1.16
SHROOM4-203ENST00000460112 OR5AC2Q9NZP5 309 aa7.77□□□□□ -1.16
SHROOM4-203ENST00000460112 PPIAL4EA0A075B759 164 aa7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 PPIAL4DF5H284 164 aa7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 PPIAL4FP0DN26 164 aa7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 RPL31P62899 125 aaKnown RBP7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 C10orf128Q5T292 105 aa7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 ANKRD34AQ69YU3 496 aa7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 MS4A3Q96HJ5 214 aa7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 KIR2DL4Q99706 377 aa7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 PPIAL4AQ9Y536 164 aa7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 RPL36A-HNRNPH2H7BZ11 118 aa7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 ETHE1O95571 254 aa7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 PWWP2BQ6NUJ5 590 aa7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 CUL9Q8IWT3 2517 aa7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 CDKN2AP42771 156 aaKnown RBP7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 NMUP48645 174 aa7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 GAPTQ8N292 157 aa7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 FBLIM1Q8WUP2 373 aa7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 GPR35Q9HC97 309 aa7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 ZNF71Q9NQZ8 489 aaPredicted RBP7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 TMEM140Q9NV12 185 aa7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 TCRBV16S1A1N1A0A5B0 115 aa7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 RPS27P42677 84 aaKnown RBP7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 POLR2GP62487 172 aaKnown RBP eCLIP7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 NUDT10Q8NFP7 164 aa7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 CD300CQ08708 224 aa7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 ST3GAL2Q16842 350 aa7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 SPINK14Q6IE38 97 aa7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 C11orf68Q9H3H3 251 aaKnown RBP7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 ACACBO00763 2458 aa7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 MYO9AB2RTY4 2548 aa7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 CD74P04233 296 aa7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 WNT1P04628 370 aa7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 GEMIN7Q9H840 131 aaKnown RBP7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 HSPB7Q9UBY9 170 aa7.77□□□□□ -1.17
SHROOM4-203ENST00000460112 DLX6P56179 175 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 DMKNQ6E0U4 476 aaPredicted RBP7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 SSMEM1Q8WWF3 244 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 ORAI1Q96D31 301 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 PLPPR2Q96GM1 343 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 NRIP2Q9BQI9 281 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 ARHGAP32A7KAX9 2087 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 A0A0U1RQV5 110 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 OR2W5A6NFC9 320 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 EIF3GO75821 320 aaKnown RBP eCLIP7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 FSTP19883 344 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 ATP5G2Q06055 141 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 BEND2Q8NDZ0 799 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 ALPK3Q96L96 1907 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 IGHV5-51A0A0C4DH38 117 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 SIGLEC5O15389 551 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 HLA-DQB1P01920 261 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 AMY1AP04745 511 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 CXorf66Q5JRM2 361 aaPredicted RBP7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 METTL1Q9UBP6 276 aaKnown RBP7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 TRAV9-1A0A075B6T8 112 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 PQLC2LA1A4F0 135 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 H3BRM9 83 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 PF4P02776 101 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 SIGLEC14Q08ET2 396 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 ZNF124Q15973 351 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 C8orf82Q6P1X6 216 aaPredicted RBP7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 ISOC2Q96AB3 205 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 MSL2Q9HCI7 577 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms