RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 IFITM2Q01629 132 aa2.9□□□□□ -1.95
CCDC50-203ENST00000460064 Q499Y3 187 aa2.9□□□□□ -1.95
CCDC50-203ENST00000460064 LIN52Q52LA3 116 aa2.9□□□□□ -1.95
CCDC50-203ENST00000460064 TRMT12Q53H54 448 aaKnown RBP2.9□□□□□ -1.95
CCDC50-203ENST00000460064 ACSBG2Q5FVE4 666 aa2.9□□□□□ -1.95
CCDC50-203ENST00000460064 OR10K2Q6IF99 312 aa2.9□□□□□ -1.95
CCDC50-203ENST00000460064 RASSF6Q6ZTQ3 369 aa2.9□□□□□ -1.95
CCDC50-203ENST00000460064 KRTAP5-2Q701N4 177 aa2.9□□□□□ -1.95
CCDC50-203ENST00000460064 OR10A6Q8NH74 314 aa2.9□□□□□ -1.95
CCDC50-203ENST00000460064 RNASE11Q8TAA1 199 aaKnown RBP2.9□□□□□ -1.95
CCDC50-203ENST00000460064 SPPL2BQ8TCT7 592 aa2.9□□□□□ -1.95
CCDC50-203ENST00000460064 KCTD4Q8WVF5 259 aa2.9□□□□□ -1.95
CCDC50-203ENST00000460064 ZHX1-C8orf76Q96EF9 292 aa2.9□□□□□ -1.95
CCDC50-203ENST00000460064 OLFM3Q96PB7 478 aa2.9□□□□□ -1.95
CCDC50-203ENST00000460064 TBX5Q99593 518 aa2.9□□□□□ -1.95
CCDC50-203ENST00000460064 SHANK2-AS3Q9BTD1 123 aa2.9□□□□□ -1.95
CCDC50-203ENST00000460064 TAPBPLQ9BX59 468 aa2.9□□□□□ -1.95
CCDC50-203ENST00000460064 TXNIPQ9H3M7 391 aa2.9□□□□□ -1.95
CCDC50-203ENST00000460064 FBXL15Q9H469 300 aa2.9□□□□□ -1.95
CCDC50-203ENST00000460064 COMMD9Q9P000 198 aa2.9□□□□□ -1.95
CCDC50-203ENST00000460064 GSKIPQ9P0R6 139 aa2.9□□□□□ -1.95
CCDC50-203ENST00000460064 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.9□□□□□ -1.95
CCDC50-203ENST00000460064 ASB4Q9Y574 426 aa2.9□□□□□ -1.95
CCDC50-203ENST00000460064 VPS37CA5D8V6 355 aaPredicted RBP2.89□□□□□ -1.95
CCDC50-203ENST00000460064 FAM159BA6NKW6 160 aa2.89□□□□□ -1.95
CCDC50-203ENST00000460064 ATP6V1G2-DDX39BF2Z307 99 aa2.89□□□□□ -1.95
CCDC50-203ENST00000460064 F8W036 122 aa2.89□□□□□ -1.95
CCDC50-203ENST00000460064 SLC37A4O43826 429 aa2.89□□□□□ -1.95
CCDC50-203ENST00000460064 CST8O60676 142 aa2.89□□□□□ -1.95
CCDC50-203ENST00000460064 REG1AP05451 166 aa2.89□□□□□ -1.95
CCDC50-203ENST00000460064 CRYGDP07320 174 aa2.89□□□□□ -1.95
CCDC50-203ENST00000460064 FAM228BP0C875 321 aa2.89□□□□□ -1.95
CCDC50-203ENST00000460064 GZMMP51124 257 aa2.89□□□□□ -1.95
CCDC50-203ENST00000460064 NAA20P61599 178 aa2.89□□□□□ -1.95
CCDC50-203ENST00000460064 BTN3A2P78410 334 aa2.89□□□□□ -1.95
CCDC50-203ENST00000460064 TSNQ15631 228 aaKnown RBP2.89□□□□□ -1.95
CCDC50-203ENST00000460064 CLEC12BQ2HXU8 276 aa2.89□□□□□ -1.95
CCDC50-203ENST00000460064 MRPL2Q5T653 305 aaKnown RBP2.89□□□□□ -1.95
CCDC50-203ENST00000460064 HIST2H3PS2Q5TEC6 136 aa2.89□□□□□ -1.95
CCDC50-203ENST00000460064 TNFAIP8L2Q6P589 184 aaPredicted RBP2.89□□□□□ -1.95
CCDC50-203ENST00000460064 EIF4E3Q8N5X7 224 aaKnown RBP2.89□□□□□ -1.95
CCDC50-203ENST00000460064 OR8A1Q8NGG7 326 aa2.89□□□□□ -1.95
CCDC50-203ENST00000460064 OR1L8Q8NGR8 309 aa2.89□□□□□ -1.95
CCDC50-203ENST00000460064 TNFAIP8L1Q8WVP5 186 aa2.89□□□□□ -1.95
CCDC50-203ENST00000460064 TMBIM1Q969X1 311 aa2.89□□□□□ -1.95
CCDC50-203ENST00000460064 ANAPC13Q9BS18 74 aa2.89□□□□□ -1.95
CCDC50-203ENST00000460064 ABCG5Q9H222 651 aa2.89□□□□□ -1.95
CCDC50-203ENST00000460064 DCSTAMPQ9H295 470 aa2.89□□□□□ -1.95
CCDC50-203ENST00000460064 POMKQ9H5K3 350 aa2.89□□□□□ -1.95
CCDC50-203ENST00000460064 TMEM138Q9NPI0 162 aa2.89□□□□□ -1.95
CCDC50-203ENST00000460064 BIN3Q9NQY0 253 aa2.89□□□□□ -1.95
CCDC50-203ENST00000460064 CCDC171Q6TFL3 1326 aa2.89□□□□□ -1.95
CCDC50-203ENST00000460064 CEP152O94986 1710 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 SYNMO15061 1565 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 NOS1P29475 1434 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 IGSF23A1L1A6 192 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 GMNCA6NCL1 334 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 PRORSD1PA6NEY8 169 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 CD300LBA8K4G0 201 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 OR7C1O76099 320 aaPredicted RBP2.88□□□□□ -1.95
CCDC50-203ENST00000460064 FSTL3O95633 263 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 SOD3P08294 240 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 SCGB1C2P0DMR2 95 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 CD99P14209 185 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 GABRA1P14867 456 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 ZNF708P17019 499 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 PRTN3P24158 256 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 KRTAP10-10P60014 251 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 RUNX1Q01196 453 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 RPL13AP3Q6NVV1 102 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 IDO2Q6ZQW0 420 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 SLC35F6Q8N357 371 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 ZFP62Q8NB50 900 aaPredicted RBP2.88□□□□□ -1.95
CCDC50-203ENST00000460064 ST6GALNAC3Q8NDV1 305 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 OR8J3Q8NGG0 315 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 SCGB1C1Q8TD33 95 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 FXYD5Q96DB9 178 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 SMIM12Q96EX1 92 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 BIRC8Q96P09 236 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 PFDN5Q99471 154 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 PITX2Q99697 317 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 SLC25A31Q9H0C2 315 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 ENY2Q9NPA8 101 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 IDI2-AS1Q9NZ38 188 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 RBM12B-AS1Q9P1G2 102 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 OPTCQ9UBM4 332 aa2.88□□□□□ -1.95
CCDC50-203ENST00000460064 UTP11Q9Y3A2 253 aaKnown RBP2.88□□□□□ -1.95
CCDC50-203ENST00000460064 LSM5Q9Y4Y9 91 aaKnown RBP2.88□□□□□ -1.95
CCDC50-203ENST00000460064 EXOC1LA0A1B0GW35 172 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 A0A1B0GXF2 115 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 OR4C46A6NHA9 309 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 IGLL5B9A064 214 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 K7EPK0 472 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 BHLHE40O14503 412 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 FFAR1O14842 300 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 GYG2O15488 501 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 MT-CO2P00403 227 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 SERPINA7P05543 415 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 OR10J4P0C629 311 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 MYL12AP19105 171 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms