RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 SLC35B3Q9H1N7 401 aa10.1□□□□□ -0.79
SMPD4-213ENST00000454468 PRO1933Q9H354 126 aa10.1□□□□□ -0.79
SMPD4-213ENST00000454468 LYRM2Q9NU23 88 aaPredicted RBP10.1□□□□□ -0.79
SMPD4-213ENST00000454468 RBFOX3A6NFN3 312 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 ZNF891A8MT65 544 aaPredicted RBP10.09□□□□□ -0.79
SMPD4-213ENST00000454468 PRR33A8MZF0 331 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 DFFBO76075 338 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 OR2C1O95371 312 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 UCP1P25874 307 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 PRDX2P32119 198 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 SNCAP37840 140 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 UBE2G2P60604 165 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 KIAA0141Q14154 515 aaPredicted RBP10.09□□□□□ -0.79
SMPD4-213ENST00000454468 SAXO1Q8IYX7 474 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 OR4D5Q8NGN0 318 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 TCEAL7Q9BRU2 100 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 ZNF665Q9H7R5 613 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 WSB1Q9Y6I7 421 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 ZFHX4Q86UP3 3567 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 IRF2P14316 349 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 MDKP21741 143 aaPredicted RBP10.09□□□□□ -0.79
SMPD4-213ENST00000454468 SLC38A11Q08AI6 406 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 CST9LP1Q5W188 147 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 ZNF324BQ6AW86 544 aaPredicted RBP10.09□□□□□ -0.79
SMPD4-213ENST00000454468 BTNL8Q6UX41 500 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 H1FOOQ8IZA3 346 aaPredicted RBP10.09□□□□□ -0.79
SMPD4-213ENST00000454468 CYB561D1Q8N8Q1 229 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 ITLN1Q8WWA0 313 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 GNPNAT1Q96EK6 184 aaPredicted RBP10.09□□□□□ -0.79
SMPD4-213ENST00000454468 PKIBQ9C010 78 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 ZDHHC11Q9H8X9 412 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 AURKAIP1Q9NWT8 199 aaPredicted RBP10.09□□□□□ -0.79
SMPD4-213ENST00000454468 STRAPQ9Y3F4 350 aaKnown RBP10.09□□□□□ -0.79
SMPD4-213ENST00000454468 KIAA1549Q9HCM3 1950 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 TNCP24821 2201 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 DCHS1Q96JQ0 3298 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 FAM90A10PA6NDY2 464 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 FAM90A18PA6NE21 464 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 FAM90A16PA6NEW6 464 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 FAM90A20PA6NIJ5 464 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 FAM90A8PA6NJQ4 464 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 FAM90A7PA6NKC0 464 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 RNF212BA8MTL3 300 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 C17orf98A8MV24 154 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 FAM90A22PA8MWA6 464 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 FAM90A12PA8MX19 464 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 FAM90A5PA8MXJ8 464 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 FAM90A23PA8MXZ1 464 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 K7EM74 188 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 FAM90A15PP0C7V4 464 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 FAM90A13PP0C7W8 464 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 FAM90A14PP0C7W9 464 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 FAM90A24PP0C7X0 464 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 NKX6-1P78426 367 aaPredicted RBP10.09□□□□□ -0.79
SMPD4-213ENST00000454468 OR4A16Q8NH70 328 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 NIPSNAP3BQ9BS92 247 aa10.09□□□□□ -0.79
SMPD4-213ENST00000454468 KLF2Q9Y5W3 355 aaPredicted RBP10.09□□□□□ -0.79
SMPD4-213ENST00000454468 GALR2O43603 387 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-213ENST00000454468 HNF1AP20823 631 aa10.08□□□□□ -0.8
SMPD4-213ENST00000454468 RNF212Q495C1 297 aa10.08□□□□□ -0.8
SMPD4-213ENST00000454468 LYG1Q8N1E2 194 aa10.08□□□□□ -0.8
SMPD4-213ENST00000454468 OR5D13Q8NGL4 314 aa10.08□□□□□ -0.8
SMPD4-213ENST00000454468 PPP1R35Q8TAP8 253 aa10.08□□□□□ -0.8
SMPD4-213ENST00000454468 ATP5SQ99766 215 aa10.08□□□□□ -0.8
SMPD4-213ENST00000454468 VSIRQ9H7M9 311 aa10.08□□□□□ -0.8
SMPD4-213ENST00000454468 PLSCR2Q9NRY7 297 aa10.08□□□□□ -0.8
SMPD4-213ENST00000454468 ZG16O60844 167 aa10.08□□□□□ -0.8
SMPD4-213ENST00000454468 PGA5P0DJD9 388 aa10.08□□□□□ -0.8
SMPD4-213ENST00000454468 KLF3P57682 345 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-213ENST00000454468 ERVK-16P61578 105 aa10.08□□□□□ -0.8
SMPD4-213ENST00000454468 ADIRFQ15847 76 aa10.08□□□□□ -0.8
SMPD4-213ENST00000454468 ACSF3Q4G176 576 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-213ENST00000454468 DMRTC2Q8IXT2 367 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-213ENST00000454468 CYB5R3P00387 301 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-213ENST00000454468 GPX4P36969 197 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-213ENST00000454468 SULT1A1P50225 295 aa10.08□□□□□ -0.8
SMPD4-213ENST00000454468 RND3P61587 244 aa10.08□□□□□ -0.8
SMPD4-213ENST00000454468 PRB3Q04118 309 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-213ENST00000454468 ZNF429Q86V71 674 aa10.08□□□□□ -0.8
SMPD4-213ENST00000454468 OR4C12Q96R67 309 aa10.08□□□□□ -0.8
SMPD4-213ENST00000454468 IGHV2OR16-5A0A0B4J2B6 119 aa10.07□□□□□ -0.8
SMPD4-213ENST00000454468 NUDT19A8MXV4 375 aa10.07□□□□□ -0.8
SMPD4-213ENST00000454468 FGF7P21781 194 aa10.07□□□□□ -0.8
SMPD4-213ENST00000454468 EIF2S3P41091 472 aaKnown RBP10.07□□□□□ -0.8
SMPD4-213ENST00000454468 ERVFRD-1P60508 538 aa10.07□□□□□ -0.8
SMPD4-213ENST00000454468 RPL30P62888 115 aaKnown RBP10.07□□□□□ -0.8
SMPD4-213ENST00000454468 RPL39P5Q59GN2 51 aa10.07□□□□□ -0.8
SMPD4-213ENST00000454468 Q6P435 159 aa10.07□□□□□ -0.8
SMPD4-213ENST00000454468 OR10P1Q8NGE3 313 aa10.07□□□□□ -0.8
SMPD4-213ENST00000454468 CCL17Q92583 94 aa10.07□□□□□ -0.8
SMPD4-213ENST00000454468 TMEM56Q96MV1 263 aa10.07□□□□□ -0.8
SMPD4-213ENST00000454468 RAB40CQ96S21 281 aa10.07□□□□□ -0.8
SMPD4-213ENST00000454468 TMEM56-RWDD3S4R434 201 aa10.07□□□□□ -0.8
SMPD4-213ENST00000454468 MDH2P40926 338 aaKnown RBP10.07□□□□□ -0.8
SMPD4-213ENST00000454468 NCMAPQ5T1S8 102 aa10.07□□□□□ -0.8
SMPD4-213ENST00000454468 WDR82Q6UXN9 313 aa10.07□□□□□ -0.8
SMPD4-213ENST00000454468 TMEM68Q96MH6 324 aa10.07□□□□□ -0.8
SMPD4-213ENST00000454468 CCL13Q99616 98 aa10.07□□□□□ -0.8
SMPD4-213ENST00000454468 TMEM204Q9BSN7 226 aa10.07□□□□□ -0.8
SMPD4-213ENST00000454468 RPRMQ9NS64 109 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms