RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 SULT1C2O00338 296 aa22.31■■□□□ 1.16
SMARCC1-203ENST00000454240 MOSP00540 346 aa22.31■■□□□ 1.16
SMARCC1-203ENST00000454240 NFYAP23511 347 aaPredicted RBP22.31■■□□□ 1.16
SMARCC1-203ENST00000454240 PRSS22Q9GZN4 317 aa22.31■■□□□ 1.16
SMARCC1-203ENST00000454240 OR2D2Q9H210 308 aa22.31■■□□□ 1.16
SMARCC1-203ENST00000454240 MOB4Q9Y3A3 225 aa22.31■■□□□ 1.16
SMARCC1-203ENST00000454240 OR2W1Q9Y3N9 320 aa22.31■■□□□ 1.16
SMARCC1-203ENST00000454240 RNF114Q9Y508 228 aa22.31■■□□□ 1.16
SMARCC1-203ENST00000454240 DNHD1Q96M86 4753 aa22.31■■□□□ 1.16
SMARCC1-203ENST00000454240 M0QZK8 103 aa22.3■■□□□ 1.16
SMARCC1-203ENST00000454240 TUSC2O75896 110 aa22.3■■□□□ 1.16
SMARCC1-203ENST00000454240 Q6ZS46 218 aa22.3■■□□□ 1.16
SMARCC1-203ENST00000454240 MCFD2Q8NI22 146 aa22.3■■□□□ 1.16
SMARCC1-203ENST00000454240 RBMXL1Q96E39 390 aaKnown RBP22.3■■□□□ 1.16
SMARCC1-203ENST00000454240 ABHD1Q96SE0 405 aa22.3■■□□□ 1.16
SMARCC1-203ENST00000454240 C6orf62Q9GZU0 229 aaPredicted RBP22.3■■□□□ 1.16
SMARCC1-203ENST00000454240 NECAP2Q9NVZ3 263 aa22.3■■□□□ 1.16
SMARCC1-203ENST00000454240 RBM7Q9Y580 266 aaKnown RBP22.3■■□□□ 1.16
SMARCC1-203ENST00000454240 PROK1P58294 105 aa22.29■■□□□ 1.16
SMARCC1-203ENST00000454240 C11orf88Q6PI97 169 aa22.29■■□□□ 1.16
SMARCC1-203ENST00000454240 C3orf56Q8N813 242 aa22.29■■□□□ 1.16
SMARCC1-203ENST00000454240 OR2T6Q8NHC8 308 aa22.29■■□□□ 1.16
SMARCC1-203ENST00000454240 C15orf40Q8WUR7 153 aa22.29■■□□□ 1.16
SMARCC1-203ENST00000454240 DCUN1D5Q9BTE7 237 aa22.29■■□□□ 1.16
SMARCC1-203ENST00000454240 SDHAF2Q9NX18 166 aa22.29■■□□□ 1.16
SMARCC1-203ENST00000454240 NDUFA13Q9P0J0 144 aa22.29■■□□□ 1.16
SMARCC1-203ENST00000454240 SIGLEC9Q9Y336 463 aa22.29■■□□□ 1.16
SMARCC1-203ENST00000454240 ANK2Q01484 3957 aa22.29■■□□□ 1.16
SMARCC1-203ENST00000454240 OR5H8P0DN80 308 aa22.28■■□□□ 1.16
SMARCC1-203ENST00000454240 CDK10Q15131 360 aa22.28■■□□□ 1.16
SMARCC1-203ENST00000454240 LYSMD2Q8IV50 215 aa22.28■■□□□ 1.16
SMARCC1-203ENST00000454240 C5orf56Q8N8D9 126 aa22.28■■□□□ 1.16
SMARCC1-203ENST00000454240 OR5AN1Q8NGI8 311 aa22.28■■□□□ 1.16
SMARCC1-203ENST00000454240 ZNF747Q9BV97 191 aa22.28■■□□□ 1.16
SMARCC1-203ENST00000454240 PLSCR3Q9NRY6 295 aa22.28■■□□□ 1.16
SMARCC1-203ENST00000454240 DPPA5A6NC42 116 aa22.27■■□□□ 1.16
SMARCC1-203ENST00000454240 FGF16O43320 207 aa22.27■■□□□ 1.16
SMARCC1-203ENST00000454240 LUMP51884 338 aaPredicted RBP22.27■■□□□ 1.16
SMARCC1-203ENST00000454240 GLDNQ6ZMI3 551 aaPredicted RBP22.27■■□□□ 1.16
SMARCC1-203ENST00000454240 DGCR14Q96DF8 476 aaKnown RBP22.27■■□□□ 1.16
SMARCC1-203ENST00000454240 C5orf30Q96GV9 206 aa22.27■■□□□ 1.16
SMARCC1-203ENST00000454240 OR5H14A6NHG9 310 aa22.26■■□□□ 1.15
SMARCC1-203ENST00000454240 H0YJW9 148 aa22.26■■□□□ 1.15
SMARCC1-203ENST00000454240 J3QRK9 145 aa22.26■■□□□ 1.15
SMARCC1-203ENST00000454240 FCGR2CP31995 323 aa22.26■■□□□ 1.15
SMARCC1-203ENST00000454240 MC5RP33032 325 aa22.26■■□□□ 1.15
SMARCC1-203ENST00000454240 ABCA11PQ4W5N1 156 aa22.26■■□□□ 1.15
SMARCC1-203ENST00000454240 OVCH2Q7RTZ1 564 aa22.26■■□□□ 1.15
SMARCC1-203ENST00000454240 ZNF383Q8NA42 475 aa22.26■■□□□ 1.15
SMARCC1-203ENST00000454240 DRAXINQ8NBI3 349 aaPredicted RBP22.26■■□□□ 1.15
SMARCC1-203ENST00000454240 OR8H1Q8NGG4 311 aa22.26■■□□□ 1.15
SMARCC1-203ENST00000454240 DIRAS2Q96HU8 199 aa22.26■■□□□ 1.15
SMARCC1-203ENST00000454240 SERTAD4Q9NUC0 356 aa22.26■■□□□ 1.15
SMARCC1-203ENST00000454240 IGKV1D-13A0A0B4J2D9 117 aa22.25■■□□□ 1.15
SMARCC1-203ENST00000454240 M0R1X1 148 aa22.25■■□□□ 1.15
SMARCC1-203ENST00000454240 IGKV1-13P0DP09 117 aa22.25■■□□□ 1.15
SMARCC1-203ENST00000454240 LINC00205P59089 165 aa22.25■■□□□ 1.15
SMARCC1-203ENST00000454240 TAS2R46P59540 309 aa22.25■■□□□ 1.15
SMARCC1-203ENST00000454240 FAM131AQ6UXB0 335 aa22.25■■□□□ 1.15
SMARCC1-203ENST00000454240 ZNF645Q8N7E2 425 aa22.25■■□□□ 1.15
SMARCC1-203ENST00000454240 GIMAP1Q8WWP7 306 aa22.25■■□□□ 1.15
SMARCC1-203ENST00000454240 WFDC12Q8WWY7 111 aa22.25■■□□□ 1.15
SMARCC1-203ENST00000454240 A3GALT2U3KPV4 340 aa22.25■■□□□ 1.15
SMARCC1-203ENST00000454240 AADACP22760 399 aa22.24■■□□□ 1.15
SMARCC1-203ENST00000454240 TNFSF8P32971 234 aa22.24■■□□□ 1.15
SMARCC1-203ENST00000454240 RCVRNP35243 200 aa22.24■■□□□ 1.15
SMARCC1-203ENST00000454240 F2RL1P55085 397 aa22.24■■□□□ 1.15
SMARCC1-203ENST00000454240 Q8N9W7 124 aa22.24■■□□□ 1.15
SMARCC1-203ENST00000454240 OR52I2Q8NH67 350 aa22.24■■□□□ 1.15
SMARCC1-203ENST00000454240 RITA1Q96K30 269 aa22.24■■□□□ 1.15
SMARCC1-203ENST00000454240 MMP27Q9H306 513 aa22.24■■□□□ 1.15
SMARCC1-203ENST00000454240 RABL2AQ9UBK7 228 aaPredicted RBP22.24■■□□□ 1.15
SMARCC1-203ENST00000454240 RABL2BQ9UNT1 228 aa22.24■■□□□ 1.15
SMARCC1-203ENST00000454240 SH2D7A6NKC9 451 aaPredicted RBP22.23■■□□□ 1.15
SMARCC1-203ENST00000454240 NCBP2LA6PVI3 153 aaKnown RBP22.23■■□□□ 1.15
SMARCC1-203ENST00000454240 SLC22A5O76082 557 aa22.23■■□□□ 1.15
SMARCC1-203ENST00000454240 IGLV2-14P01704 120 aa22.23■■□□□ 1.15
SMARCC1-203ENST00000454240 PMP2P02689 132 aa22.23■■□□□ 1.15
SMARCC1-203ENST00000454240 RFX2P48378 723 aa22.23■■□□□ 1.15
SMARCC1-203ENST00000454240 ACTBP60709 375 aa22.23■■□□□ 1.15
SMARCC1-203ENST00000454240 DYRK1AQ13627 763 aa22.23■■□□□ 1.15
SMARCC1-203ENST00000454240 DHRS11Q6UWP2 260 aa22.23■■□□□ 1.15
SMARCC1-203ENST00000454240 OR5H2Q8NGV7 314 aa22.23■■□□□ 1.15
SMARCC1-203ENST00000454240 EHFQ9NZC4 300 aa22.23■■□□□ 1.15
SMARCC1-203ENST00000454240 KLK11Q9UBX7 282 aa22.23■■□□□ 1.15
SMARCC1-203ENST00000454240 WASHC3Q9Y3C0 194 aa22.23■■□□□ 1.15
SMARCC1-203ENST00000454240 HAX1O00165 279 aa22.22■■□□□ 1.15
SMARCC1-203ENST00000454240 PPYP01298 95 aa22.22■■□□□ 1.15
SMARCC1-203ENST00000454240 HLA-DMAP28067 261 aa22.22■■□□□ 1.15
SMARCC1-203ENST00000454240 FOXB2Q5VYV0 432 aa22.22■■□□□ 1.15
SMARCC1-203ENST00000454240 ZNF660Q6AZW8 331 aaPredicted RBP22.22■■□□□ 1.15
SMARCC1-203ENST00000454240 PYHIN1Q6K0P9 492 aa22.22■■□□□ 1.15
SMARCC1-203ENST00000454240 MTFP1Q9UDX5 166 aa22.22■■□□□ 1.15
SMARCC1-203ENST00000454240 HRH1P35367 487 aa22.21■■□□□ 1.15
SMARCC1-203ENST00000454240 KRTAP10-3P60369 221 aa22.21■■□□□ 1.15
SMARCC1-203ENST00000454240 MRPS10P82664 201 aaKnown RBP22.21■■□□□ 1.15
SMARCC1-203ENST00000454240 RNASE12Q5GAN4 147 aaKnown RBP22.21■■□□□ 1.15
SMARCC1-203ENST00000454240 FAM71E2Q8N5Q1 922 aa22.21■■□□□ 1.15
SMARCC1-203ENST00000454240 FCAMRQ8WWV6 532 aa22.21■■□□□ 1.15
SMARCC1-203ENST00000454240 SOSTQ9BQB4 213 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms