RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 CBX5P45973 191 aa15.85■□□□□ 0.13
COL9A3-202ENST00000452372 GPR12P47775 334 aa15.85■□□□□ 0.13
COL9A3-202ENST00000452372 GVQW1Q8N7I0 195 aa15.85■□□□□ 0.13
COL9A3-202ENST00000452372 C5orf56Q8N8D9 126 aa15.85■□□□□ 0.13
COL9A3-202ENST00000452372 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.85■□□□□ 0.13
COL9A3-202ENST00000452372 BEST4Q8NFU0 473 aa15.85■□□□□ 0.13
COL9A3-202ENST00000452372 OR8H1Q8NGG4 311 aa15.85■□□□□ 0.13
COL9A3-202ENST00000452372 PLSCR3Q9NRY6 295 aa15.85■□□□□ 0.13
COL9A3-202ENST00000452372 NCBP2LA6PVI3 153 aaKnown RBP15.84■□□□□ 0.13
COL9A3-202ENST00000452372 HLA-DQB1P01920 261 aa15.84■□□□□ 0.13
COL9A3-202ENST00000452372 VDAC2P45880 294 aaPredicted RBP15.84■□□□□ 0.13
COL9A3-202ENST00000452372 ARSJQ5FYB0 599 aaPredicted RBP15.84■□□□□ 0.13
COL9A3-202ENST00000452372 SH2D7A6NKC9 451 aaPredicted RBP15.83■□□□□ 0.12
COL9A3-202ENST00000452372 NOL3O60936 208 aaKnown RBP15.83■□□□□ 0.12
COL9A3-202ENST00000452372 MC5RP33032 325 aa15.83■□□□□ 0.12
COL9A3-202ENST00000452372 PRSS3P35030 304 aa15.83■□□□□ 0.12
COL9A3-202ENST00000452372 PDLIM3Q53GG5 364 aaPredicted RBP15.83■□□□□ 0.12
COL9A3-202ENST00000452372 KLHDC1Q8N7A1 406 aa15.83■□□□□ 0.12
COL9A3-202ENST00000452372 OR5AN1Q8NGI8 311 aa15.83■□□□□ 0.12
COL9A3-202ENST00000452372 DYNC2LI1Q8TCX1 351 aa15.83■□□□□ 0.12
COL9A3-202ENST00000452372 ISOC1Q96CN7 298 aa15.83■□□□□ 0.12
COL9A3-202ENST00000452372 RBMXL1Q96E39 390 aaKnown RBP15.83■□□□□ 0.12
COL9A3-202ENST00000452372 WNT10AQ9GZT5 417 aa15.83■□□□□ 0.12
COL9A3-202ENST00000452372 OR2D2Q9H210 308 aa15.83■□□□□ 0.12
COL9A3-202ENST00000452372 CEPT1Q9Y6K0 416 aa15.83■□□□□ 0.12
COL9A3-202ENST00000452372 OR5H14A6NHG9 310 aa15.82■□□□□ 0.12
COL9A3-202ENST00000452372 H3BMQ9 156 aa15.82■□□□□ 0.12
COL9A3-202ENST00000452372 VSIG10L2P0DP72 767 aa15.82■□□□□ 0.12
COL9A3-202ENST00000452372 F2RL1P55085 397 aa15.82■□□□□ 0.12
COL9A3-202ENST00000452372 ARPC4P59998 168 aa15.82■□□□□ 0.12
COL9A3-202ENST00000452372 TMEM95Q3KNT9 176 aa15.82■□□□□ 0.12
COL9A3-202ENST00000452372 C9orf152Q5JTZ5 239 aa15.82■□□□□ 0.12
COL9A3-202ENST00000452372 GLDNQ6ZMI3 551 aaPredicted RBP15.82■□□□□ 0.12
COL9A3-202ENST00000452372 Q8N9W7 124 aa15.82■□□□□ 0.12
COL9A3-202ENST00000452372 RITA1Q96K30 269 aa15.82■□□□□ 0.12
COL9A3-202ENST00000452372 LIN7CQ9NUP9 197 aaKnown RBP15.82■□□□□ 0.12
COL9A3-202ENST00000452372 SDHAF2Q9NX18 166 aa15.82■□□□□ 0.12
COL9A3-202ENST00000452372 MRPS7Q9Y2R9 242 aaKnown RBP15.82■□□□□ 0.12
COL9A3-202ENST00000452372 OR2W1Q9Y3N9 320 aa15.82■□□□□ 0.12
COL9A3-202ENST00000452372 RBM7Q9Y580 266 aaKnown RBP15.82■□□□□ 0.12
COL9A3-202ENST00000452372 MEIS3P1A6NDR6 274 aa15.81■□□□□ 0.12
COL9A3-202ENST00000452372 FAM25AB3EWG3 89 aa15.81■□□□□ 0.12
COL9A3-202ENST00000452372 FAM25CB3EWG5 89 aa15.81■□□□□ 0.12
COL9A3-202ENST00000452372 FAM25GB3EWG6 89 aa15.81■□□□□ 0.12
COL9A3-202ENST00000452372 H0YJW9 148 aa15.81■□□□□ 0.12
COL9A3-202ENST00000452372 PEX14O75381 377 aa15.81■□□□□ 0.12
COL9A3-202ENST00000452372 NFYAP23511 347 aaPredicted RBP15.81■□□□□ 0.12
COL9A3-202ENST00000452372 ACTBP60709 375 aa15.81■□□□□ 0.12
COL9A3-202ENST00000452372 FAM131AQ6UXB0 335 aa15.81■□□□□ 0.12
COL9A3-202ENST00000452372 DRAXINQ8NBI3 349 aaPredicted RBP15.81■□□□□ 0.12
COL9A3-202ENST00000452372 WIPF2Q8TF74 440 aaPredicted RBP15.81■□□□□ 0.12
COL9A3-202ENST00000452372 SNAPC3Q92966 411 aa15.81■□□□□ 0.12
COL9A3-202ENST00000452372 CCDC59Q9P031 241 aaKnown RBP15.81■□□□□ 0.12
COL9A3-202ENST00000452372 ANAPC10Q9UM13 185 aa15.81■□□□□ 0.12
COL9A3-202ENST00000452372 M0R1X1 148 aa15.8■□□□□ 0.12
COL9A3-202ENST00000452372 TUSC2O75896 110 aa15.8■□□□□ 0.12
COL9A3-202ENST00000452372 LUMP51884 338 aaPredicted RBP15.8■□□□□ 0.12
COL9A3-202ENST00000452372 FAM71E2Q8N5Q1 922 aa15.8■□□□□ 0.12
COL9A3-202ENST00000452372 ZNF383Q8NA42 475 aa15.8■□□□□ 0.12
COL9A3-202ENST00000452372 OR5AP2Q8NGF4 316 aa15.8■□□□□ 0.12
COL9A3-202ENST00000452372 GPX8Q8TED1 209 aa15.8■□□□□ 0.12
COL9A3-202ENST00000452372 RASL11BQ9BPW5 248 aa15.8■□□□□ 0.12
COL9A3-202ENST00000452372 IFT46Q9NQC8 304 aa15.8■□□□□ 0.12
COL9A3-202ENST00000452372 NECAP2Q9NVZ3 263 aa15.8■□□□□ 0.12
COL9A3-202ENST00000452372 WASHC3Q9Y3C0 194 aa15.8■□□□□ 0.12
COL9A3-202ENST00000452372 IGHG2P01859 326 aa15.79■□□□□ 0.12
COL9A3-202ENST00000452372 FCER2P06734 321 aa15.79■□□□□ 0.12
COL9A3-202ENST00000452372 NAT1P18440 290 aa15.79■□□□□ 0.12
COL9A3-202ENST00000452372 LINC00205P59089 165 aa15.79■□□□□ 0.12
COL9A3-202ENST00000452372 MMDQ15546 238 aa15.79■□□□□ 0.12
COL9A3-202ENST00000452372 NPBQ8NG41 125 aa15.79■□□□□ 0.12
COL9A3-202ENST00000452372 MIXL1Q9H2W2 232 aa15.79■□□□□ 0.12
COL9A3-202ENST00000452372 SCPEP1Q9HB40 452 aa15.79■□□□□ 0.12
COL9A3-202ENST00000452372 ADAM30Q9UKF2 790 aa15.79■□□□□ 0.12
COL9A3-202ENST00000452372 H7C2Y5 167 aa15.78■□□□□ 0.12
COL9A3-202ENST00000452372 J3QRK9 145 aa15.78■□□□□ 0.12
COL9A3-202ENST00000452372 CTDSP2O14595 271 aa15.78■□□□□ 0.12
COL9A3-202ENST00000452372 RBBP9O75884 186 aa15.78■□□□□ 0.12
COL9A3-202ENST00000452372 SLC22A5O76082 557 aa15.78■□□□□ 0.12
COL9A3-202ENST00000452372 TPPPO94811 219 aa15.78■□□□□ 0.12
COL9A3-202ENST00000452372 SNX29P2Q8IUI4 249 aa15.78■□□□□ 0.12
COL9A3-202ENST00000452372 C5orf30Q96GV9 206 aa15.78■□□□□ 0.12
COL9A3-202ENST00000452372 RNF5Q99942 180 aa15.78■□□□□ 0.12
COL9A3-202ENST00000452372 EXTL2Q9UBQ6 330 aa15.78■□□□□ 0.12
COL9A3-202ENST00000452372 IGKV1D-13A0A0B4J2D9 117 aa15.77■□□□□ 0.12
COL9A3-202ENST00000452372 M0QZ24 198 aa15.77■□□□□ 0.12
COL9A3-202ENST00000452372 SULT1C2O00338 296 aa15.77■□□□□ 0.12
COL9A3-202ENST00000452372 NBR2O15453 112 aa15.77■□□□□ 0.12
COL9A3-202ENST00000452372 RGS5O15539 181 aa15.77■□□□□ 0.12
COL9A3-202ENST00000452372 OR5H8P0DN80 308 aa15.77■□□□□ 0.12
COL9A3-202ENST00000452372 IGKV1-13P0DP09 117 aa15.77■□□□□ 0.12
COL9A3-202ENST00000452372 CNTFRP26992 372 aa15.77■□□□□ 0.12
COL9A3-202ENST00000452372 FCGR2CP31995 323 aa15.77■□□□□ 0.12
COL9A3-202ENST00000452372 TAGLNQ01995 201 aaKnown RBP15.77■□□□□ 0.12
COL9A3-202ENST00000452372 CDK10Q15131 360 aa15.77■□□□□ 0.12
COL9A3-202ENST00000452372 SLC35E3Q7Z769 313 aa15.77■□□□□ 0.12
COL9A3-202ENST00000452372 CENPVQ7Z7K6 275 aaPredicted RBP15.77■□□□□ 0.12
COL9A3-202ENST00000452372 ZNF645Q8N7E2 425 aa15.77■□□□□ 0.12
COL9A3-202ENST00000452372 MMP27Q9H306 513 aa15.77■□□□□ 0.12
COL9A3-202ENST00000452372 NDUFA3O95167 84 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms