RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 PROP1O75360 226 aa9.35□□□□□ -0.91
SCN9A-204ENST00000452182 IGKV1-13P0DP09 117 aa9.35□□□□□ -0.91
SCN9A-204ENST00000452182 GPR12P47775 334 aa9.35□□□□□ -0.91
SCN9A-204ENST00000452182 DYNLT3P51808 116 aa9.35□□□□□ -0.91
SCN9A-204ENST00000452182 ARHGDIBP52566 201 aa9.35□□□□□ -0.91
SCN9A-204ENST00000452182 UCP3P55916 312 aa9.35□□□□□ -0.91
SCN9A-204ENST00000452182 HERV-K104P61576 105 aa9.35□□□□□ -0.91
SCN9A-204ENST00000452182 SSX2Q16385 188 aa9.35□□□□□ -0.91
SCN9A-204ENST00000452182 AADACL3Q5VUY0 350 aa9.35□□□□□ -0.91
SCN9A-204ENST00000452182 ZNF57Q68EA5 555 aaPredicted RBP9.35□□□□□ -0.91
SCN9A-204ENST00000452182 OR8H3Q8N146 312 aa9.35□□□□□ -0.91
SCN9A-204ENST00000452182 DYNAPQ8N1N2 210 aa9.35□□□□□ -0.91
SCN9A-204ENST00000452182 OR56B4Q8NH76 319 aa9.35□□□□□ -0.91
SCN9A-204ENST00000452182 TERB2Q8NHR7 220 aa9.35□□□□□ -0.91
SCN9A-204ENST00000452182 RTN4IP1Q8WWV3 396 aaPredicted RBP9.35□□□□□ -0.91
SCN9A-204ENST00000452182 C22orf15Q8WYQ4 148 aa9.35□□□□□ -0.91
SCN9A-204ENST00000452182 BORCS5Q969J3 196 aa9.35□□□□□ -0.91
SCN9A-204ENST00000452182 TOMM40LQ969M1 308 aa9.35□□□□□ -0.91
SCN9A-204ENST00000452182 C7orf50Q9BRJ6 194 aaKnown RBP9.35□□□□□ -0.91
SCN9A-204ENST00000452182 HRASLSQ9HDD0 168 aa9.35□□□□□ -0.91
SCN9A-204ENST00000452182 RNF150Q9ULK6 438 aa9.35□□□□□ -0.91
SCN9A-204ENST00000452182 NAP1L6A6NFF2 107 aa9.34□□□□□ -0.91
SCN9A-204ENST00000452182 UPK1BO75841 260 aa9.34□□□□□ -0.91
SCN9A-204ENST00000452182 IGLV2-14P01704 120 aa9.34□□□□□ -0.91
SCN9A-204ENST00000452182 ECI1P42126 302 aa9.34□□□□□ -0.91
SCN9A-204ENST00000452182 DIAPH2-AS1Q14236 149 aa9.34□□□□□ -0.91
SCN9A-204ENST00000452182 HABP2Q14520 560 aaPredicted RBP9.34□□□□□ -0.91
SCN9A-204ENST00000452182 DEFB112Q30KQ8 113 aa9.34□□□□□ -0.91
SCN9A-204ENST00000452182 PLA1AQ53H76 456 aa9.34□□□□□ -0.91
SCN9A-204ENST00000452182 FAAP20Q6NZ36 180 aa9.34□□□□□ -0.91
SCN9A-204ENST00000452182 LPCAT3Q6P1A2 487 aa9.34□□□□□ -0.91
SCN9A-204ENST00000452182 Q6YL49 198 aa9.34□□□□□ -0.91
SCN9A-204ENST00000452182 TGIF2LXQ8IUE1 241 aa9.34□□□□□ -0.91
SCN9A-204ENST00000452182 ZBTB34Q8NCN2 500 aa9.34□□□□□ -0.91
SCN9A-204ENST00000452182 AKR1E2Q96JD6 320 aa9.34□□□□□ -0.91
SCN9A-204ENST00000452182 ZNF48Q96MX3 618 aaPredicted RBP9.34□□□□□ -0.91
SCN9A-204ENST00000452182 SDHAF2Q9NX18 166 aa9.34□□□□□ -0.91
SCN9A-204ENST00000452182 SCP2D1Q9UJQ7 156 aa9.34□□□□□ -0.91
SCN9A-204ENST00000452182 HILPDAQ9Y5L2 63 aa9.34□□□□□ -0.91
SCN9A-204ENST00000452182 SOX21Q9Y651 276 aaPredicted RBP9.34□□□□□ -0.91
SCN9A-204ENST00000452182 FN1P02751 2386 aaKnown RBP9.34□□□□□ -0.91
SCN9A-204ENST00000452182 A0A1W2PPI3 338 aa9.34□□□□□ -0.91
SCN9A-204ENST00000452182 OR5H14A6NHG9 310 aa9.34□□□□□ -0.91
SCN9A-204ENST00000452182 CENPXA8MT69 81 aa9.34□□□□□ -0.91
SCN9A-204ENST00000452182 FXYD4P59646 89 aa9.34□□□□□ -0.91
SCN9A-204ENST00000452182 SURF2Q15527 256 aaPredicted RBP9.34□□□□□ -0.91
SCN9A-204ENST00000452182 RPL39P5Q59GN2 51 aa9.34□□□□□ -0.91
SCN9A-204ENST00000452182 OR51S1Q8NGJ8 323 aa9.34□□□□□ -0.91
SCN9A-204ENST00000452182 SECTM1Q8WVN6 248 aa9.34□□□□□ -0.91
SCN9A-204ENST00000452182 FXYD6Q9H0Q3 95 aa9.34□□□□□ -0.91
SCN9A-204ENST00000452182 MCUBQ9NWR8 336 aa9.34□□□□□ -0.91
SCN9A-204ENST00000452182 IGHV1-3A0A0C4DH29 117 aa9.33□□□□□ -0.92
SCN9A-204ENST00000452182 PLA2G10O15496 165 aa9.33□□□□□ -0.92
SCN9A-204ENST00000452182 GNRHRP30968 328 aa9.33□□□□□ -0.92
SCN9A-204ENST00000452182 BRS3P32247 399 aa9.33□□□□□ -0.92
SCN9A-204ENST00000452182 LRRC75BQ2VPJ9 315 aa9.33□□□□□ -0.92
SCN9A-204ENST00000452182 SCGB2B2Q4G0G5 96 aa9.33□□□□□ -0.92
SCN9A-204ENST00000452182 IDO2Q6ZQW0 420 aa9.33□□□□□ -0.92
SCN9A-204ENST00000452182 SLC38A6Q8IZM9 456 aa9.33□□□□□ -0.92
SCN9A-204ENST00000452182 DRAM1Q8N682 238 aa9.33□□□□□ -0.92
SCN9A-204ENST00000452182 BVESQ8NE79 360 aa9.33□□□□□ -0.92
SCN9A-204ENST00000452182 MRGPRFQ96AM1 343 aa9.33□□□□□ -0.92
SCN9A-204ENST00000452182 ZNF486Q96H40 463 aaPredicted RBP9.33□□□□□ -0.92
SCN9A-204ENST00000452182 SLC5A7Q9GZV3 580 aa9.33□□□□□ -0.92
SCN9A-204ENST00000452182 CCL28Q9NRJ3 127 aa9.33□□□□□ -0.92
SCN9A-204ENST00000452182 ABCB10Q9NRK6 738 aa9.33□□□□□ -0.92
SCN9A-204ENST00000452182 MTORP42345 2549 aa9.32□□□□□ -0.92
SCN9A-204ENST00000452182 CUBNO60494 3623 aa9.32□□□□□ -0.92
SCN9A-204ENST00000452182 MDFIC2A0A1B0GVS7 189 aa9.32□□□□□ -0.92
SCN9A-204ENST00000452182 FAM90A9PA6NNJ1 464 aa9.32□□□□□ -0.92
SCN9A-204ENST00000452182 CT45A6P0DMU7 189 aa9.32□□□□□ -0.92
SCN9A-204ENST00000452182 CT45A5P0DMU8 189 aa9.32□□□□□ -0.92
SCN9A-204ENST00000452182 CT45A7P0DMV0 189 aa9.32□□□□□ -0.92
SCN9A-204ENST00000452182 IER3P46695 156 aa9.32□□□□□ -0.92
SCN9A-204ENST00000452182 REG1BP48304 166 aa9.32□□□□□ -0.92
SCN9A-204ENST00000452182 EIF4EBP1Q13541 118 aaPredicted RBP9.32□□□□□ -0.92
SCN9A-204ENST00000452182 RBMS3Q6XE24 437 aaKnown RBP9.32□□□□□ -0.92
SCN9A-204ENST00000452182 ZNF66Q6ZN08 573 aa9.32□□□□□ -0.92
SCN9A-204ENST00000452182 ZNF818PQ6ZRF7 136 aa9.32□□□□□ -0.92
SCN9A-204ENST00000452182 THNSL2Q86YJ6 484 aa9.32□□□□□ -0.92
SCN9A-204ENST00000452182 TMEM86BQ8N661 226 aa9.32□□□□□ -0.92
SCN9A-204ENST00000452182 SIGLECL1Q8N7X8 197 aa9.32□□□□□ -0.92
SCN9A-204ENST00000452182 OR13C8Q8NGS7 320 aa9.32□□□□□ -0.92
SCN9A-204ENST00000452182 CFHR4Q92496 578 aa9.32□□□□□ -0.92
SCN9A-204ENST00000452182 C5orf30Q96GV9 206 aa9.32□□□□□ -0.92
SCN9A-204ENST00000452182 ADTRPQ96IZ2 230 aa9.32□□□□□ -0.92
SCN9A-204ENST00000452182 NABP2Q9BQ15 211 aa9.32□□□□□ -0.92
SCN9A-204ENST00000452182 RSRP1Q9BUV0 290 aa9.32□□□□□ -0.92
SCN9A-204ENST00000452182 DPAGT1Q9H3H5 408 aa9.32□□□□□ -0.92
SCN9A-204ENST00000452182 POMT1Q9Y6A1 747 aa9.32□□□□□ -0.92
SCN9A-204ENST00000452182 A0A0A6YYJ9 748 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 M0R1X1 148 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 GPR31O00270 319 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 TIMM23O14925 209 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 LYRM1O43325 122 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 PAX6P26367 422 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 CD1BP29016 333 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 MC5RP33032 325 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 DUTP33316 252 aaKnown RBP9.31□□□□□ -0.92
SCN9A-204ENST00000452182 IFITM3Q01628 133 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms