RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 ADIRFQ15847 76 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 C1orf185Q5T7R7 199 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 WBP2NLQ6ICG8 309 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 PET117Q6UWS5 81 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 TMEM144Q7Z5S9 345 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 ATG4DQ86TL0 474 aaPredicted RBP11.12□□□□□ -0.63
DDX56-206ENST00000446987 DOLPP1Q86YN1 238 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 ATP5SQ99766 215 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 PSMG3Q9BT73 122 aaPredicted RBP11.12□□□□□ -0.63
DDX56-206ENST00000446987 CHODLQ9H9P2 273 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 MRPL22Q9NWU5 206 aaKnown RBP11.12□□□□□ -0.63
DDX56-206ENST00000446987 ZNF581Q9P0T4 197 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 MRPS28Q9Y2Q9 187 aaKnown RBP11.12□□□□□ -0.63
DDX56-206ENST00000446987 IGHV1-69-2A0A0G2JMI3 117 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 FAM221AA4D161 298 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 NPIPA3F8WFD2 350 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 AADACP22760 399 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 RPS27P42677 84 aaKnown RBP11.12□□□□□ -0.63
DDX56-206ENST00000446987 MYO7BQ6PIF6 2116 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 GLIPR1L1Q6UWM5 242 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 TMEM123Q8N131 208 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 TMEM256Q8N2U0 113 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 OR5AU1Q8NGC0 362 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 PRR7Q8TB68 274 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 IL22RA2Q969J5 263 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 TOMM40LQ969M1 308 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 MSI2Q96DH6 328 aaKnown RBP11.12□□□□□ -0.63
DDX56-206ENST00000446987 OR10A2Q9H208 303 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 MANBALQ9NQG1 85 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 SLC35D1Q9NTN3 355 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 ERRFI1Q9UJM3 462 aaPredicted RBP11.12□□□□□ -0.63
DDX56-206ENST00000446987 EMC9Q9Y3B6 208 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 TRAPPC1Q9Y5R8 145 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 DIDO1Q9BTC0 2240 aaKnown RBP11.11□□□□□ -0.63
DDX56-206ENST00000446987 PRSS37A4D1T9 235 aa11.11□□□□□ -0.63
DDX56-206ENST00000446987 FAM24AA6NFZ4 105 aa11.11□□□□□ -0.63
DDX56-206ENST00000446987 SDCBPO00560 298 aaPredicted RBP11.11□□□□□ -0.63
DDX56-206ENST00000446987 MPIG6BO95866 241 aa11.11□□□□□ -0.63
DDX56-206ENST00000446987 REG1AP05451 166 aa11.11□□□□□ -0.63
DDX56-206ENST00000446987 LHX2P50458 406 aa11.11□□□□□ -0.63
DDX56-206ENST00000446987 UCP3P55916 312 aa11.11□□□□□ -0.63
DDX56-206ENST00000446987 CLDN15P56746 228 aa11.11□□□□□ -0.63
DDX56-206ENST00000446987 PIGPP57054 158 aa11.11□□□□□ -0.63
DDX56-206ENST00000446987 FOXL1Q12952 345 aa11.11□□□□□ -0.63
DDX56-206ENST00000446987 TDRG1Q3Y452 100 aa11.11□□□□□ -0.63
DDX56-206ENST00000446987 OR52M1Q8NGK5 317 aa11.11□□□□□ -0.63
DDX56-206ENST00000446987 TMEM171Q8WVE6 324 aa11.11□□□□□ -0.63
DDX56-206ENST00000446987 RELTQ969Z4 430 aa11.11□□□□□ -0.63
DDX56-206ENST00000446987 ARHGAP5-AS1Q96IT6 56 aa11.11□□□□□ -0.63
DDX56-206ENST00000446987 ST6GALNAC5Q9BVH7 336 aa11.11□□□□□ -0.63
DDX56-206ENST00000446987 PRDM14Q9GZV8 571 aa11.11□□□□□ -0.63
DDX56-206ENST00000446987 VDAC3Q9Y277 283 aa11.11□□□□□ -0.63
DDX56-206ENST00000446987 FAM215AQ9Y5M1 114 aa11.11□□□□□ -0.63
DDX56-206ENST00000446987 LRRK2Q5S007 2527 aa11.1□□□□□ -0.63
DDX56-206ENST00000446987 TRAV9-1A0A075B6T8 112 aa11.1□□□□□ -0.63
DDX56-206ENST00000446987 H7C1C5 153 aa11.1□□□□□ -0.63
DDX56-206ENST00000446987 EFNA2O43921 213 aa11.1□□□□□ -0.63
DDX56-206ENST00000446987 CSTAP01040 98 aa11.1□□□□□ -0.63
DDX56-206ENST00000446987 HLA-HP01893 362 aa11.1□□□□□ -0.63
DDX56-206ENST00000446987 HLA-DQA2P01906 255 aa11.1□□□□□ -0.63
DDX56-206ENST00000446987 IL11P20809 199 aa11.1□□□□□ -0.63
DDX56-206ENST00000446987 SUMO3P55854 103 aaPredicted RBP11.1□□□□□ -0.63
DDX56-206ENST00000446987 LCN6P62502 163 aa11.1□□□□□ -0.63
DDX56-206ENST00000446987 SUMO1P63165 101 aaKnown RBP11.1□□□□□ -0.63
DDX56-206ENST00000446987 VHLLQ6RSH7 139 aa11.1□□□□□ -0.63
DDX56-206ENST00000446987 LYZL2Q7Z4W2 148 aa11.1□□□□□ -0.63
DDX56-206ENST00000446987 APH1AQ96BI3 265 aa11.1□□□□□ -0.63
DDX56-206ENST00000446987 PCNX1Q96RV3 2341 aa11.1□□□□□ -0.63
DDX56-206ENST00000446987 OR5B21A6NL26 309 aa11.1□□□□□ -0.63
DDX56-206ENST00000446987 HS3ST1O14792 307 aa11.1□□□□□ -0.63
DDX56-206ENST00000446987 HYPMO75409 117 aa11.1□□□□□ -0.63
DDX56-206ENST00000446987 IGHMP01871 453 aa11.1□□□□□ -0.63
DDX56-206ENST00000446987 MSR1P21757 451 aa11.1□□□□□ -0.63
DDX56-206ENST00000446987 FGF8P55075 233 aaPredicted RBP11.1□□□□□ -0.63
DDX56-206ENST00000446987 SERF2P84101 59 aa11.1□□□□□ -0.63
DDX56-206ENST00000446987 DOPEY1Q5JWR5 2465 aa11.1□□□□□ -0.63
DDX56-206ENST00000446987 TCTEX1D1Q8N7M0 179 aa11.1□□□□□ -0.63
DDX56-206ENST00000446987 OR5C1Q8NGR4 320 aa11.1□□□□□ -0.63
DDX56-206ENST00000446987 ZNF519Q8TB69 540 aa11.1□□□□□ -0.63
DDX56-206ENST00000446987 RTN4IP1Q8WWV3 396 aaPredicted RBP11.1□□□□□ -0.63
DDX56-206ENST00000446987 DOCK7Q96N67 2140 aa11.1□□□□□ -0.63
DDX56-206ENST00000446987 SF3B5Q9BWJ5 86 aaKnown RBP11.1□□□□□ -0.63
DDX56-206ENST00000446987 TM2D1Q9BX74 207 aa11.1□□□□□ -0.63
DDX56-206ENST00000446987 RBM7Q9Y580 266 aaKnown RBP11.1□□□□□ -0.63
DDX56-206ENST00000446987 TRGV8A0A0C4DH27 118 aa11.09□□□□□ -0.63
DDX56-206ENST00000446987 ZFP92A6NM28 416 aa11.09□□□□□ -0.63
DDX56-206ENST00000446987 ZNF17P17021 662 aa11.09□□□□□ -0.63
DDX56-206ENST00000446987 IL3RAP26951 378 aa11.09□□□□□ -0.63
DDX56-206ENST00000446987 NKX2-1P43699 371 aaPredicted RBP11.09□□□□□ -0.63
DDX56-206ENST00000446987 ADORA2A-AS1P86434 159 aa11.09□□□□□ -0.63
DDX56-206ENST00000446987 RBPJQ06330 500 aa11.09□□□□□ -0.63
DDX56-206ENST00000446987 Q0VG73 95 aa11.09□□□□□ -0.63
DDX56-206ENST00000446987 MSMO1Q15800 293 aa11.09□□□□□ -0.63
DDX56-206ENST00000446987 ABCA11PQ4W5N1 156 aa11.09□□□□□ -0.63
DDX56-206ENST00000446987 SLC25A53Q5H9E4 307 aa11.09□□□□□ -0.63
DDX56-206ENST00000446987 RAET1LQ5VY80 246 aa11.09□□□□□ -0.63
DDX56-206ENST00000446987 CST9LP1Q5W188 147 aa11.09□□□□□ -0.63
DDX56-206ENST00000446987 VWA1Q6PCB0 445 aa11.09□□□□□ -0.63
DDX56-206ENST00000446987 SEM1Q6ZVN7 128 aa11.09□□□□□ -0.63
DDX56-206ENST00000446987 GGNQ86UU5 652 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms