RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 ONECUT1Q9UBC0 465 aa16.11■□□□□ 0.17
SHANK3-203ENST00000445220 COL11A2P13942 1736 aaPredicted RBP16.11■□□□□ 0.17
SHANK3-203ENST00000445220 DXOO77932 396 aaKnown RBP16.11■□□□□ 0.17
SHANK3-203ENST00000445220 SCGB1A1P11684 91 aa16.11■□□□□ 0.17
SHANK3-203ENST00000445220 HARBI1Q96MB7 349 aa16.11■□□□□ 0.17
SHANK3-203ENST00000445220 CLEC1BQ9P126 229 aa16.11■□□□□ 0.17
SHANK3-203ENST00000445220 SPSB4Q96A44 273 aa16.11■□□□□ 0.17
SHANK3-203ENST00000445220 SMIM8Q96KF7 97 aa16.11■□□□□ 0.17
SHANK3-203ENST00000445220 AMELYQ99218 206 aa16.11■□□□□ 0.17
SHANK3-203ENST00000445220 OR51B2Q9Y5P1 312 aa16.11■□□□□ 0.17
SHANK3-203ENST00000445220 DNPH1O43598 174 aa16.11■□□□□ 0.17
SHANK3-203ENST00000445220 ZNF83P51522 516 aa16.11■□□□□ 0.17
SHANK3-203ENST00000445220 FAM222BQ8WU58 562 aa16.11■□□□□ 0.17
SHANK3-203ENST00000445220 PSMG3Q9BT73 122 aaPredicted RBP16.11■□□□□ 0.17
SHANK3-203ENST00000445220 DUSP15Q9H1R2 295 aaPredicted RBP16.11■□□□□ 0.17
SHANK3-203ENST00000445220 TRAV38-1A0A0B4J264 116 aa16.1■□□□□ 0.17
SHANK3-203ENST00000445220 UBE2CO00762 179 aa16.1■□□□□ 0.17
SHANK3-203ENST00000445220 SMIM13P0DJ93 91 aa16.1■□□□□ 0.17
SHANK3-203ENST00000445220 LRRC37AA6NMS7 1700 aa16.1■□□□□ 0.17
SHANK3-203ENST00000445220 SPINT1O43278 529 aa16.1■□□□□ 0.17
SHANK3-203ENST00000445220 MGPP08493 103 aa16.1■□□□□ 0.17
SHANK3-203ENST00000445220 CKS2P33552 79 aa16.1■□□□□ 0.17
SHANK3-203ENST00000445220 COL10A1Q03692 680 aa16.1■□□□□ 0.17
SHANK3-203ENST00000445220 MRPL13Q9BYD1 178 aaKnown RBP16.1■□□□□ 0.17
SHANK3-203ENST00000445220 TMEM189A5PLL7 270 aa16.1■□□□□ 0.17
SHANK3-203ENST00000445220 HYPMO75409 117 aa16.1■□□□□ 0.17
SHANK3-203ENST00000445220 CEACAM3P40198 252 aa16.1■□□□□ 0.17
SHANK3-203ENST00000445220 GALNT14Q96FL9 552 aa16.1■□□□□ 0.17
SHANK3-203ENST00000445220 A0A1W2PQF6 199 aa16.1■□□□□ 0.17
SHANK3-203ENST00000445220 SH2D7A6NKC9 451 aaPredicted RBP16.1■□□□□ 0.17
SHANK3-203ENST00000445220 FXYD3Q14802 87 aa16.1■□□□□ 0.17
SHANK3-203ENST00000445220 SAPCD1Q5SSQ6 148 aa16.1■□□□□ 0.17
SHANK3-203ENST00000445220 HIGD1AQ9Y241 93 aa16.1■□□□□ 0.17
SHANK3-203ENST00000445220 SPINK2P20155 84 aa16.09■□□□□ 0.17
SHANK3-203ENST00000445220 SHISA3A0PJX4 238 aa16.09■□□□□ 0.17
SHANK3-203ENST00000445220 A1L4Q6 167 aa16.09■□□□□ 0.17
SHANK3-203ENST00000445220 KLK10O43240 276 aa16.09■□□□□ 0.17
SHANK3-203ENST00000445220 PGLYRP1O75594 196 aaPredicted RBP16.09■□□□□ 0.17
SHANK3-203ENST00000445220 FGF5P12034 268 aa16.09■□□□□ 0.17
SHANK3-203ENST00000445220 CBLN1P23435 193 aa16.09■□□□□ 0.17
SHANK3-203ENST00000445220 EMP1P54849 157 aa16.09■□□□□ 0.17
SHANK3-203ENST00000445220 SPANXN1Q5VSR9 72 aa16.09■□□□□ 0.17
SHANK3-203ENST00000445220 MARS2Q96GW9 593 aaKnown RBP16.09■□□□□ 0.17
SHANK3-203ENST00000445220 SRP19P09132 144 aaKnown RBP16.09■□□□□ 0.17
SHANK3-203ENST00000445220 TMEM187Q14656 261 aa16.09■□□□□ 0.17
SHANK3-203ENST00000445220 OR8B2Q96RD0 313 aa16.09■□□□□ 0.17
SHANK3-203ENST00000445220 TCFL5Q9UL49 500 aa16.09■□□□□ 0.17
SHANK3-203ENST00000445220 CRXO43186 299 aaPredicted RBP16.09■□□□□ 0.17
SHANK3-203ENST00000445220 MIC13Q5XKP0 118 aa16.09■□□□□ 0.17
SHANK3-203ENST00000445220 CALHM1Q8IU99 346 aa16.09■□□□□ 0.17
SHANK3-203ENST00000445220 CT55Q8WUE5 264 aa16.09■□□□□ 0.17
SHANK3-203ENST00000445220 WDYHV1Q96HA8 205 aa16.09■□□□□ 0.17
SHANK3-203ENST00000445220 WFDC6Q9BQY6 131 aa16.09■□□□□ 0.17
SHANK3-203ENST00000445220 MSGN1A6NI15 193 aa16.08■□□□□ 0.17
SHANK3-203ENST00000445220 C21orf140B9A014 251 aa16.08■□□□□ 0.17
SHANK3-203ENST00000445220 ZNF735P0CB33 412 aa16.08■□□□□ 0.17
SHANK3-203ENST00000445220 SELENOTP62341 195 aa16.08■□□□□ 0.17
SHANK3-203ENST00000445220 FUT5Q11128 374 aa16.08■□□□□ 0.17
SHANK3-203ENST00000445220 CLDN16Q9Y5I7 305 aa16.08■□□□□ 0.17
SHANK3-203ENST00000445220 TNFSF10P50591 281 aa16.08■□□□□ 0.16
SHANK3-203ENST00000445220 WDR54Q9H977 334 aa16.08■□□□□ 0.16
SHANK3-203ENST00000445220 GPR35Q9HC97 309 aa16.08■□□□□ 0.16
SHANK3-203ENST00000445220 FAM90A10PA6NDY2 464 aa16.08■□□□□ 0.16
SHANK3-203ENST00000445220 FAM90A18PA6NE21 464 aa16.08■□□□□ 0.16
SHANK3-203ENST00000445220 FAM90A16PA6NEW6 464 aa16.08■□□□□ 0.16
SHANK3-203ENST00000445220 FAM90A20PA6NIJ5 464 aa16.08■□□□□ 0.16
SHANK3-203ENST00000445220 FAM90A8PA6NJQ4 464 aa16.08■□□□□ 0.16
SHANK3-203ENST00000445220 FAM90A7PA6NKC0 464 aa16.08■□□□□ 0.16
SHANK3-203ENST00000445220 FAM90A22PA8MWA6 464 aa16.08■□□□□ 0.16
SHANK3-203ENST00000445220 FAM90A12PA8MX19 464 aa16.08■□□□□ 0.16
SHANK3-203ENST00000445220 FAM90A5PA8MXJ8 464 aa16.08■□□□□ 0.16
SHANK3-203ENST00000445220 FAM90A23PA8MXZ1 464 aa16.08■□□□□ 0.16
SHANK3-203ENST00000445220 LYZL6O75951 148 aa16.08■□□□□ 0.16
SHANK3-203ENST00000445220 FAM90A15PP0C7V4 464 aa16.08■□□□□ 0.16
SHANK3-203ENST00000445220 FAM90A13PP0C7W8 464 aa16.08■□□□□ 0.16
SHANK3-203ENST00000445220 FAM90A14PP0C7W9 464 aa16.08■□□□□ 0.16
SHANK3-203ENST00000445220 FAM90A24PP0C7X0 464 aa16.08■□□□□ 0.16
SHANK3-203ENST00000445220 FGF12P61328 243 aa16.08■□□□□ 0.16
SHANK3-203ENST00000445220 CYP2G1PQ6ZSU1 146 aa16.08■□□□□ 0.16
SHANK3-203ENST00000445220 C14orf144Q96I85 54 aa16.08■□□□□ 0.16
SHANK3-203ENST00000445220 F11RQ9Y624 299 aaKnown RBP16.08■□□□□ 0.16
SHANK3-203ENST00000445220 KNTC1P50748 2209 aa16.08■□□□□ 0.16
SHANK3-203ENST00000445220 RNF222A6NCQ9 220 aa16.08■□□□□ 0.16
SHANK3-203ENST00000445220 ERGP11308 486 aa16.08■□□□□ 0.16
SHANK3-203ENST00000445220 COX7A1P24310 79 aa16.08■□□□□ 0.16
SHANK3-203ENST00000445220 PEBP1P30086 187 aaKnown RBP16.08■□□□□ 0.16
SHANK3-203ENST00000445220 TINAGQ9UJW2 476 aa16.08■□□□□ 0.16
SHANK3-203ENST00000445220 SCTP09683 121 aa16.07■□□□□ 0.16
SHANK3-203ENST00000445220 OR4A8P0C604 315 aa16.07■□□□□ 0.16
SHANK3-203ENST00000445220 LINC00869P0C866 280 aa16.07■□□□□ 0.16
SHANK3-203ENST00000445220 MNX1P50219 401 aaPredicted RBP16.07■□□□□ 0.16
SHANK3-203ENST00000445220 TMEM210A6NLX4 147 aa16.07■□□□□ 0.16
SHANK3-203ENST00000445220 H7C2G1 150 aa16.07■□□□□ 0.16
SHANK3-203ENST00000445220 ARL14EPLP0DKL9 152 aa16.07■□□□□ 0.16
SHANK3-203ENST00000445220 LRRC75BQ2VPJ9 315 aa16.07■□□□□ 0.16
SHANK3-203ENST00000445220 LIPFP07098 398 aa16.07■□□□□ 0.16
SHANK3-203ENST00000445220 ARF6P62330 175 aa16.07■□□□□ 0.16
SHANK3-203ENST00000445220 ADIPOQQ15848 244 aa16.07■□□□□ 0.16
SHANK3-203ENST00000445220 ZNF788Q6ZQV5 615 aa16.07■□□□□ 0.16
SHANK3-203ENST00000445220 GLRX5Q86SX6 157 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms