RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 GPHA2Q96T91 129 aa17.14■□□□□ 0.33
VPS13B-204ENST00000441350 ZNF469Q96JG9 3925 aaPredicted RBP17.13■□□□□ 0.33
VPS13B-204ENST00000441350 CRYM-AS1A6NIL9 109 aa17.13■□□□□ 0.33
VPS13B-204ENST00000441350 BUB1B-PAK6H3BSN5 160 aa17.13■□□□□ 0.33
VPS13B-204ENST00000441350 MPPED1O15442 326 aa17.13■□□□□ 0.33
VPS13B-204ENST00000441350 ARG1P05089 322 aa17.13■□□□□ 0.33
VPS13B-204ENST00000441350 OR4E1P0C645 316 aa17.13■□□□□ 0.33
VPS13B-204ENST00000441350 UBE2E1P51965 193 aa17.13■□□□□ 0.33
VPS13B-204ENST00000441350 SUPT4H1P63272 117 aaKnown RBP17.13■□□□□ 0.33
VPS13B-204ENST00000441350 TATDN3Q17R31 274 aa17.13■□□□□ 0.33
VPS13B-204ENST00000441350 ZNF833PQ6ZTB9 187 aa17.13■□□□□ 0.33
VPS13B-204ENST00000441350 CCDC71LQ8N9Z2 235 aa17.13■□□□□ 0.33
VPS13B-204ENST00000441350 TEX15Q9BXT5 2789 aa17.12■□□□□ 0.33
VPS13B-204ENST00000441350 TNFSF12O43508 249 aa17.12■□□□□ 0.33
VPS13B-204ENST00000441350 PRAF2O60831 178 aa17.12■□□□□ 0.33
VPS13B-204ENST00000441350 ZNF16P17020 682 aaPredicted RBP17.12■□□□□ 0.33
VPS13B-204ENST00000441350 S100GP29377 79 aa17.12■□□□□ 0.33
VPS13B-204ENST00000441350 PPP1R1AQ13522 171 aa17.12■□□□□ 0.33
VPS13B-204ENST00000441350 GLDNQ6ZMI3 551 aaPredicted RBP17.12■□□□□ 0.33
VPS13B-204ENST00000441350 TBC1D26Q86UD7 250 aa17.12■□□□□ 0.33
VPS13B-204ENST00000441350 PDZD9Q8IXQ8 264 aa17.12■□□□□ 0.33
VPS13B-204ENST00000441350 CENPVL3A0A0U1RRI6 287 aa17.11■□□□□ 0.33
VPS13B-204ENST00000441350 LY6LH3BQJ8 138 aa17.11■□□□□ 0.33
VPS13B-204ENST00000441350 AVPP01185 164 aa17.11■□□□□ 0.33
VPS13B-204ENST00000441350 LDLRAD2Q5SZI1 272 aa17.11■□□□□ 0.33
VPS13B-204ENST00000441350 FAM71F2Q6NXP2 309 aa17.11■□□□□ 0.33
VPS13B-204ENST00000441350 S1PR3Q99500 378 aa17.11■□□□□ 0.33
VPS13B-204ENST00000441350 NAA60Q9H7X0 242 aa17.11■□□□□ 0.33
VPS13B-204ENST00000441350 AMMECR1Q9Y4X0 333 aaPredicted RBP17.11■□□□□ 0.33
VPS13B-204ENST00000441350 C7orf66A4D0T2 115 aa17.1■□□□□ 0.33
VPS13B-204ENST00000441350 IL3RAP26951 378 aa17.1■□□□□ 0.33
VPS13B-204ENST00000441350 DHRS2Q13268 280 aa17.1■□□□□ 0.33
VPS13B-204ENST00000441350 C4orf46Q504U0 113 aa17.1■□□□□ 0.33
VPS13B-204ENST00000441350 ZNF66Q6ZN08 573 aa17.1■□□□□ 0.33
VPS13B-204ENST00000441350 KCTD9Q7L273 389 aa17.1■□□□□ 0.33
VPS13B-204ENST00000441350 SGPP2Q8IWX5 399 aa17.1■□□□□ 0.33
VPS13B-204ENST00000441350 HSD17B10Q99714 261 aaKnown RBP17.1■□□□□ 0.33
VPS13B-204ENST00000441350 SEC22CQ9BRL7 303 aa17.1■□□□□ 0.33
VPS13B-204ENST00000441350 TEX13DA0A0J9YY54 714 aaPredicted RBP17.1■□□□□ 0.33
VPS13B-204ENST00000441350 M0R1X1 148 aa17.1■□□□□ 0.33
VPS13B-204ENST00000441350 F2RP25116 425 aa17.1■□□□□ 0.33
VPS13B-204ENST00000441350 HTR1DP28221 377 aa17.1■□□□□ 0.33
VPS13B-204ENST00000441350 DUTP33316 252 aaKnown RBP17.1■□□□□ 0.33
VPS13B-204ENST00000441350 RPL30P62888 115 aaKnown RBP17.1■□□□□ 0.33
VPS13B-204ENST00000441350 KRTAP1-1Q07627 177 aa17.1■□□□□ 0.33
VPS13B-204ENST00000441350 LYG2Q86SG7 212 aa17.1■□□□□ 0.33
VPS13B-204ENST00000441350 OR52B4Q8NGK2 314 aa17.1■□□□□ 0.33
VPS13B-204ENST00000441350 GALNT14Q96FL9 552 aa17.1■□□□□ 0.33
VPS13B-204ENST00000441350 ALG5Q9Y673 324 aa17.1■□□□□ 0.33
VPS13B-204ENST00000441350 A0A0A6YYJ9 748 aa17.09■□□□□ 0.33
VPS13B-204ENST00000441350 A0A1B0GVG6 124 aa17.09■□□□□ 0.33
VPS13B-204ENST00000441350 A0A1W2PRD5 423 aa17.09■□□□□ 0.33
VPS13B-204ENST00000441350 A0A1W2PRF3 423 aa17.09■□□□□ 0.33
VPS13B-204ENST00000441350 A0A1W2PRM7 423 aa17.09■□□□□ 0.33
VPS13B-204ENST00000441350 C9orf170A2RU37 121 aa17.09■□□□□ 0.33
VPS13B-204ENST00000441350 VAMP1P23763 118 aa17.09■□□□□ 0.33
VPS13B-204ENST00000441350 LINC00205P59089 165 aa17.09■□□□□ 0.33
VPS13B-204ENST00000441350 DIAPH2-AS1Q14236 149 aa17.09■□□□□ 0.33
VPS13B-204ENST00000441350 DPM3Q9P2X0 92 aa17.09■□□□□ 0.33
VPS13B-204ENST00000441350 SETXQ7Z333 2677 aaKnown RBP17.09■□□□□ 0.33
VPS13B-204ENST00000441350 LINC00473A8K010 186 aa17.08■□□□□ 0.32
VPS13B-204ENST00000441350 RNF212BA8MTL3 300 aa17.08■□□□□ 0.32
VPS13B-204ENST00000441350 LEUTXA8MZ59 168 aa17.08■□□□□ 0.32
VPS13B-204ENST00000441350 SFT2D2O95562 160 aa17.08■□□□□ 0.32
VPS13B-204ENST00000441350 HLA-AP01891 365 aaKnown RBP17.08■□□□□ 0.32
VPS13B-204ENST00000441350 MINOS1Q5TGZ0 78 aa17.08■□□□□ 0.32
VPS13B-204ENST00000441350 DRAXINQ8NBI3 349 aaPredicted RBP17.08■□□□□ 0.32
VPS13B-204ENST00000441350 OR51H1Q8NH63 302 aa17.08■□□□□ 0.32
VPS13B-204ENST00000441350 GPN1Q9HCN4 374 aaPredicted RBP17.08■□□□□ 0.32
VPS13B-204ENST00000441350 MINOS1-NBL1R4GNA1 71 aa17.08■□□□□ 0.32
VPS13B-204ENST00000441350 TRAV40A0A0B4J280 105 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 IGHV1-69DA0A0B4J2H0 117 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 C3orf85A0A1B0GTC6 90 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 SNRPGP15A8MWD9 76 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 IGHV1-69P01742 117 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 CT45A6P0DMU7 189 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 CT45A5P0DMU8 189 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 CT45A7P0DMV0 189 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 MIDNQ504T8 468 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 C11orf88Q6PI97 169 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 CSPG4Q6UVK1 2322 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 SPNS3Q6ZMD2 512 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 LHFPL4Q7Z7J7 247 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 ZNF431Q8TF32 576 aaPredicted RBP17.07■□□□□ 0.32
VPS13B-204ENST00000441350 AJUBAQ96IF1 538 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 TP53RKQ96S44 253 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 KCNIP3Q9Y2W7 256 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 TBL2Q9Y4P3 447 aaKnown RBP17.07■□□□□ 0.32
VPS13B-204ENST00000441350 H0Y980 276 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 NPFFO15130 113 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 DUS4LO95620 317 aaKnown RBP17.07■□□□□ 0.32
VPS13B-204ENST00000441350 IFNA2P01563 188 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 OR5AC1P0C628 307 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 IGHV4-38-2P0DP08 117 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 REG1BP48304 166 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 LGALS4P56470 323 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 BRWD1-AS2P59051 145 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 CATR1Q13166 79 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 SP6Q3SY56 376 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 KLF17Q5JT82 389 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms