RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 SELEP16581 610 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 TSPAN7P41732 249 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 CEBPDP49716 269 aaPredicted RBP7.7□□□□□ -1.18
COPB1-202ENST00000439561 RNF151Q2KHN1 245 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 KIAA1644Q3SXP7 199 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 GCSAMLQ5JQS6 135 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 SSMEM1Q8WWF3 244 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 MBD3L1Q8WWY6 194 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 DLL3Q9NYJ7 618 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 SEMA5BQ9P283 1151 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 FER1L5A0AVI2 2057 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 TRAV1-1A0A0B4J248 108 aa7.69□□□□□ -1.18
COPB1-202ENST00000439561 RFPL3SP0C7P2 107 aa7.69□□□□□ -1.18
COPB1-202ENST00000439561 LMO1P25800 156 aa7.69□□□□□ -1.18
COPB1-202ENST00000439561 TNFSF10P50591 281 aa7.69□□□□□ -1.18
COPB1-202ENST00000439561 WDR74Q6RFH5 385 aaPredicted RBP7.69□□□□□ -1.18
COPB1-202ENST00000439561 ODF3L1Q8IXM7 274 aa7.69□□□□□ -1.18
COPB1-202ENST00000439561 TPRX1Q8N7U7 411 aa7.69□□□□□ -1.18
COPB1-202ENST00000439561 PLPPR1Q8TBJ4 325 aa7.69□□□□□ -1.18
COPB1-202ENST00000439561 APOBEC3DQ96AK3 386 aaPredicted RBP7.69□□□□□ -1.18
COPB1-202ENST00000439561 TECTBQ96PL2 329 aa7.69□□□□□ -1.18
COPB1-202ENST00000439561 CHRNA10Q9GZZ6 450 aa7.69□□□□□ -1.18
COPB1-202ENST00000439561 CRIM1Q9NZV1 1036 aa7.69□□□□□ -1.18
COPB1-202ENST00000439561 LTBP2Q14767 1821 aa7.69□□□□□ -1.18
COPB1-202ENST00000439561 SLC17A3O00476 420 aa7.69□□□□□ -1.18
COPB1-202ENST00000439561 ACTL6BO94805 426 aa7.69□□□□□ -1.18
COPB1-202ENST00000439561 IGKV1-5P01602 117 aa7.69□□□□□ -1.18
COPB1-202ENST00000439561 MGST1P10620 155 aaKnown RBP7.69□□□□□ -1.18
COPB1-202ENST00000439561 CCL4P13236 92 aa7.69□□□□□ -1.18
COPB1-202ENST00000439561 NTF4P34130 210 aa7.69□□□□□ -1.18
COPB1-202ENST00000439561 AMTP48728 403 aa7.69□□□□□ -1.18
COPB1-202ENST00000439561 GNG3P63215 75 aa7.69□□□□□ -1.18
COPB1-202ENST00000439561 TGIF2LYQ8IUE0 185 aa7.69□□□□□ -1.18
COPB1-202ENST00000439561 FADS6Q8N9I5 356 aa7.69□□□□□ -1.18
COPB1-202ENST00000439561 OBP2BQ9NPH6 170 aa7.69□□□□□ -1.18
COPB1-202ENST00000439561 FREM1Q5H8C1 2179 aa7.69□□□□□ -1.18
COPB1-202ENST00000439561 TPRP12270 2363 aaKnown RBP7.69□□□□□ -1.18
COPB1-202ENST00000439561 USF3Q68DE3 2245 aa7.69□□□□□ -1.18
COPB1-202ENST00000439561 IGHV5-10-1A0A0J9YXX1 117 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 TMEM250H0YL14 139 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 NPSP0C0P6 89 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 IRF2P14316 349 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 C3AR1Q16581 482 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 CEACAM21Q3KPI0 293 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 C11orf42Q8N5U0 333 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 BEND2Q8NDZ0 799 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 OR5AU1Q8NGC0 362 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 OR10G8Q8NGN5 311 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.68□□□□□ -1.18
COPB1-202ENST00000439561 ZNF586Q9NXT0 402 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 NAT8BQ9UHF3 227 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 MRPS17Q9Y2R5 130 aaKnown RBP7.68□□□□□ -1.18
COPB1-202ENST00000439561 TMEM131Q92545 1883 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 SNURFLB1AK76 121 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 CDIPTO14735 213 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 SIAH2O43255 324 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 RAMP3O60896 148 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 SUMO1P63165 101 aaKnown RBP7.68□□□□□ -1.18
COPB1-202ENST00000439561 ZFP36L1Q07352 338 aaKnown RBP7.68□□□□□ -1.18
COPB1-202ENST00000439561 ARSJQ5FYB0 599 aaPredicted RBP7.68□□□□□ -1.18
COPB1-202ENST00000439561 PRAMEF5Q5TYX0 476 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 PRAMEF6Q5VXH4 476 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 HAPLN4Q86UW8 402 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 TUSC5Q8IXB3 177 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 GBGT1Q8N5D6 347 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 DRAM1Q8N682 238 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 IL36GQ9NZH8 169 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 POLR3KQ9Y2Y1 108 aaPredicted RBP7.68□□□□□ -1.18
COPB1-202ENST00000439561 A0A1W2PQM1 296 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 RAB4AP20338 218 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 SRP14P37108 136 aaKnown RBP7.68□□□□□ -1.18
COPB1-202ENST00000439561 FOXG1P55316 489 aaPredicted RBP7.68□□□□□ -1.18
COPB1-202ENST00000439561 RPL19P84098 196 aaKnown RBP7.68□□□□□ -1.18
COPB1-202ENST00000439561 RAB30Q15771 203 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 ATOH7Q8N100 152 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 MRGPRDQ8TDS7 321 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 APH1AQ96BI3 265 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 UHRF2Q96PU4 802 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 TMEM208Q9BTX3 173 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 SF3B5Q9BWJ5 86 aaKnown RBP7.68□□□□□ -1.18
COPB1-202ENST00000439561 PLEKHA3Q9HB20 300 aa7.68□□□□□ -1.18
COPB1-202ENST00000439561 S1PR2O95136 353 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 ADMP35318 185 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 Q6ZN92 141 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 CARFQ8N187 725 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 OR52L2PQ8NGH6 319 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 OR5A2Q8NGI9 324 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 OR1L6Q8NGR2 347 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 ZCCHC14Q8WYQ9 949 aaKnown RBP7.67□□□□□ -1.18
COPB1-202ENST00000439561 GALMQ96C23 342 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 CIB3Q96Q77 187 aaPredicted RBP7.67□□□□□ -1.18
COPB1-202ENST00000439561 NEU1Q99519 415 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 GNG12Q9UBI6 72 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 PPIAL4AQ9Y536 164 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 IGLV3-32A0A0A0MS00 114 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 TDGF1P3P51864 188 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 PCOLCEQ15113 449 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 TMEM42Q69YG0 159 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 SPINK14Q6IE38 97 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 LINC00696Q6ZRV3 163 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms