RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 SPATA46Q5T0L3 261 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 LINC01551Q86U37 167 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 BAGE3Q86Y29 109 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 BAGE2Q86Y30 109 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 PLXDC1Q8IUK5 500 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 CISD2Q8N5K1 135 aaKnown RBP11.33□□□□□ -0.6
ACTN1-204ENST00000438964 ABHD3Q8WU67 409 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 CACNA1EQ15878 2313 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 TRBV20OR9-2A0A075B6H5 130 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 CXCL13O43927 109 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 ZG16O60844 167 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 RHBDL1O75783 438 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 SERPINA7P05543 415 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 CD82P27701 267 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 CHRNB4P30926 498 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 RAB7AP51149 207 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 MRPS21P82921 87 aaKnown RBP11.33□□□□□ -0.6
ACTN1-204ENST00000438964 ZNF585BQ52M93 769 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 TPTE2P1Q5T6R2 138 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 STPG4Q8N801 248 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 PSMF1Q92530 271 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 NEIL1Q96FI4 390 aaPredicted RBP11.33□□□□□ -0.6
ACTN1-204ENST00000438964 PLSCR2Q9NRY7 297 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 OR2W1Q9Y3N9 320 aa11.33□□□□□ -0.6
ACTN1-204ENST00000438964 LOC102725191A0A1B0GVB3 256 aa11.32□□□□□ -0.6
ACTN1-204ENST00000438964 DUXBA0A1W2PPF3 345 aa11.32□□□□□ -0.6
ACTN1-204ENST00000438964 C5orf49A4QMS7 147 aa11.32□□□□□ -0.6
ACTN1-204ENST00000438964 RHBDD2Q6NTF9 364 aa11.32□□□□□ -0.6
ACTN1-204ENST00000438964 FOXB1Q99853 325 aa11.32□□□□□ -0.6
ACTN1-204ENST00000438964 TMEM38BQ9NVV0 291 aa11.32□□□□□ -0.6
ACTN1-204ENST00000438964 ARFGEF3Q5TH69 2177 aa11.32□□□□□ -0.6
ACTN1-204ENST00000438964 WNT2P09544 360 aa11.32□□□□□ -0.6
ACTN1-204ENST00000438964 PMCHP20382 165 aa11.32□□□□□ -0.6
ACTN1-204ENST00000438964 HLA-DRB5Q30154 266 aa11.32□□□□□ -0.6
ACTN1-204ENST00000438964 ASCL4Q6XD76 172 aa11.32□□□□□ -0.6
ACTN1-204ENST00000438964 AAED1Q7RTV5 226 aa11.32□□□□□ -0.6
ACTN1-204ENST00000438964 ST6GALNAC3Q8NDV1 305 aa11.32□□□□□ -0.6
ACTN1-204ENST00000438964 OR2H1Q9GZK4 316 aa11.32□□□□□ -0.6
ACTN1-204ENST00000438964 GPR35Q9HC97 309 aa11.32□□□□□ -0.6
ACTN1-204ENST00000438964 TRAPPC2LH3BP13 241 aa11.31□□□□□ -0.6
ACTN1-204ENST00000438964 ZIC3O60481 467 aa11.31□□□□□ -0.6
ACTN1-204ENST00000438964 IGLV2-14P01704 120 aa11.31□□□□□ -0.6
ACTN1-204ENST00000438964 MSX1P28360 303 aa11.31□□□□□ -0.6
ACTN1-204ENST00000438964 IER3P46695 156 aa11.31□□□□□ -0.6
ACTN1-204ENST00000438964 SERF2P84101 59 aa11.31□□□□□ -0.6
ACTN1-204ENST00000438964 SRYQ05066 204 aa11.31□□□□□ -0.6
ACTN1-204ENST00000438964 SLC25A53Q5H9E4 307 aa11.31□□□□□ -0.6
ACTN1-204ENST00000438964 ZNF324BQ6AW86 544 aaPredicted RBP11.31□□□□□ -0.6
ACTN1-204ENST00000438964 FGFRL1Q8N441 504 aa11.31□□□□□ -0.6
ACTN1-204ENST00000438964 WDYHV1Q96HA8 205 aa11.31□□□□□ -0.6
ACTN1-204ENST00000438964 CIB3Q96Q77 187 aaPredicted RBP11.31□□□□□ -0.6
ACTN1-204ENST00000438964 MIEN1Q9BRT3 115 aa11.31□□□□□ -0.6
ACTN1-204ENST00000438964 TMEM9BQ9NQ34 198 aa11.31□□□□□ -0.6
ACTN1-204ENST00000438964 DEPPQ9NTK1 212 aa11.31□□□□□ -0.6
ACTN1-204ENST00000438964 PXMP4Q9Y6I8 212 aa11.31□□□□□ -0.6
ACTN1-204ENST00000438964 LMO7DNF2Z398 122 aa11.31□□□□□ -0.6
ACTN1-204ENST00000438964 IGHEP01854 428 aa11.31□□□□□ -0.6
ACTN1-204ENST00000438964 CEBPDP49716 269 aaPredicted RBP11.31□□□□□ -0.6
ACTN1-204ENST00000438964 TMEM42Q69YG0 159 aa11.31□□□□□ -0.6
ACTN1-204ENST00000438964 PSMG3Q9BT73 122 aaPredicted RBP11.31□□□□□ -0.6
ACTN1-204ENST00000438964 CLEC1BQ9P126 229 aa11.31□□□□□ -0.6
ACTN1-204ENST00000438964 ZNF318Q5VUA4 2279 aa11.31□□□□□ -0.6
ACTN1-204ENST00000438964 TCL1AP56279 114 aa11.3□□□□□ -0.6
ACTN1-204ENST00000438964 OR8B8Q15620 311 aa11.3□□□□□ -0.6
ACTN1-204ENST00000438964 CARFQ8N187 725 aa11.3□□□□□ -0.6
ACTN1-204ENST00000438964 OR1L6Q8NGR2 347 aa11.3□□□□□ -0.6
ACTN1-204ENST00000438964 FBXL7Q9UJT9 491 aa11.3□□□□□ -0.6
ACTN1-204ENST00000438964 RNF24Q9Y225 148 aa11.3□□□□□ -0.6
ACTN1-204ENST00000438964 SELENOKQ9Y6D0 94 aa11.3□□□□□ -0.6
ACTN1-204ENST00000438964 LOC102724200A0A096LPH7 203 aaPredicted RBP11.3□□□□□ -0.6
ACTN1-204ENST00000438964 IL6RP08887 468 aaPredicted RBP11.3□□□□□ -0.6
ACTN1-204ENST00000438964 CA6P23280 308 aa11.3□□□□□ -0.6
ACTN1-204ENST00000438964 ZNF90Q03938 601 aa11.3□□□□□ -0.6
ACTN1-204ENST00000438964 C10orf35Q96D05 121 aa11.3□□□□□ -0.6
ACTN1-204ENST00000438964 PI4KAP42356 2102 aa11.3□□□□□ -0.6
ACTN1-204ENST00000438964 COL5A1P20908 1838 aaPredicted RBP11.3□□□□□ -0.6
ACTN1-204ENST00000438964 TRAV24A0A0B4J272 114 aa11.3□□□□□ -0.6
ACTN1-204ENST00000438964 CTXND1A0A1B0GTU2 59 aa11.3□□□□□ -0.6
ACTN1-204ENST00000438964 SCO2A0A1W2PP80 73 aa11.3□□□□□ -0.6
ACTN1-204ENST00000438964 IGHV3-13P01766 116 aa11.3□□□□□ -0.6
ACTN1-204ENST00000438964 IGHV3-7P01780 117 aa11.3□□□□□ -0.6
ACTN1-204ENST00000438964 CRISP2P16562 243 aa11.3□□□□□ -0.6
ACTN1-204ENST00000438964 S100GP29377 79 aa11.3□□□□□ -0.6
ACTN1-204ENST00000438964 HINT1P49773 126 aaPredicted RBP11.3□□□□□ -0.6
ACTN1-204ENST00000438964 HNRNPKP61978 463 aaKnown RBP eCLIP11.3□□□□□ -0.6
ACTN1-204ENST00000438964 FAM19A2Q8N3H0 131 aa11.3□□□□□ -0.6
ACTN1-204ENST00000438964 TSTD1Q8NFU3 115 aa11.3□□□□□ -0.6
ACTN1-204ENST00000438964 ANAPC16Q96DE5 110 aa11.3□□□□□ -0.6
ACTN1-204ENST00000438964 KIR2DS1A0A191URI9 304 aa11.29□□□□□ -0.6
ACTN1-204ENST00000438964 CLDN14O95500 239 aa11.29□□□□□ -0.6
ACTN1-204ENST00000438964 KIR2DS4P43632 304 aa11.29□□□□□ -0.6
ACTN1-204ENST00000438964 CCR5P51681 352 aa11.29□□□□□ -0.6
ACTN1-204ENST00000438964 KIR2DS1Q14954 304 aa11.29□□□□□ -0.6
ACTN1-204ENST00000438964 LTC4SQ16873 150 aa11.29□□□□□ -0.6
ACTN1-204ENST00000438964 UNQ5815/PRO19632Q6UWF5 114 aa11.29□□□□□ -0.6
ACTN1-204ENST00000438964 SLC25A45Q8N413 288 aa11.29□□□□□ -0.6
ACTN1-204ENST00000438964 PINX1Q96BK5 328 aaKnown RBP11.29□□□□□ -0.6
ACTN1-204ENST00000438964 AGMATQ9BSE5 352 aa11.29□□□□□ -0.6
ACTN1-204ENST00000438964 PRRG4Q9BZD6 226 aa11.29□□□□□ -0.6
ACTN1-204ENST00000438964 FAM234AQ9H0X4 552 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms