RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 CHD8Q9HCK8 2581 aa11.68□□□□□ -0.54
PTCHD3-201ENST00000438700 TRBV6-6A0A0A6YYG2 114 aa11.68□□□□□ -0.54
PTCHD3-201ENST00000438700 CYB5BO43169 146 aa11.68□□□□□ -0.54
PTCHD3-201ENST00000438700 TMEM50AO95807 157 aa11.68□□□□□ -0.54
PTCHD3-201ENST00000438700 MDKP21741 143 aaPredicted RBP11.68□□□□□ -0.54
PTCHD3-201ENST00000438700 ATP6V0CP27449 155 aa11.68□□□□□ -0.54
PTCHD3-201ENST00000438700 VAMP2P63027 116 aa11.68□□□□□ -0.54
PTCHD3-201ENST00000438700 CYB561D1Q8N8Q1 229 aa11.68□□□□□ -0.54
PTCHD3-201ENST00000438700 KLF14Q8TD94 323 aaPredicted RBP11.68□□□□□ -0.54
PTCHD3-201ENST00000438700 IGHV2OR16-5A0A0B4J2B6 119 aa11.67□□□□□ -0.54
PTCHD3-201ENST00000438700 UBE2KP61086 200 aa11.67□□□□□ -0.54
PTCHD3-201ENST00000438700 ERVK11-1P61568 191 aa11.67□□□□□ -0.54
PTCHD3-201ENST00000438700 RUNX1Q01196 453 aa11.67□□□□□ -0.54
PTCHD3-201ENST00000438700 OR8G1Q15617 311 aa11.67□□□□□ -0.54
PTCHD3-201ENST00000438700 KHDC3LQ587J8 217 aa11.67□□□□□ -0.54
PTCHD3-201ENST00000438700 ZNF826PQ6ZT77 177 aa11.67□□□□□ -0.54
PTCHD3-201ENST00000438700 TMEM252Q8N6L7 170 aa11.67□□□□□ -0.54
PTCHD3-201ENST00000438700 OR10V1Q8NGI7 309 aa11.67□□□□□ -0.54
PTCHD3-201ENST00000438700 OR5D13Q8NGL4 314 aa11.67□□□□□ -0.54
PTCHD3-201ENST00000438700 CABLES2Q9BTV7 478 aa11.67□□□□□ -0.54
PTCHD3-201ENST00000438700 KCNS2Q9ULS6 477 aa11.67□□□□□ -0.54
PTCHD3-201ENST00000438700 PPP1R3CQ9UQK1 317 aa11.67□□□□□ -0.54
PTCHD3-201ENST00000438700 A0A0G2JNJ9 132 aa11.67□□□□□ -0.54
PTCHD3-201ENST00000438700 H3BP45 60 aa11.67□□□□□ -0.54
PTCHD3-201ENST00000438700 SERPINE2P07093 398 aa11.67□□□□□ -0.54
PTCHD3-201ENST00000438700 PGA5P0DJD9 388 aa11.67□□□□□ -0.54
PTCHD3-201ENST00000438700 ZNF16P17020 682 aaPredicted RBP11.67□□□□□ -0.54
PTCHD3-201ENST00000438700 S100GP29377 79 aa11.67□□□□□ -0.54
PTCHD3-201ENST00000438700 ZNF83P51522 516 aa11.67□□□□□ -0.54
PTCHD3-201ENST00000438700 ZNF497Q6ZNH5 498 aa11.67□□□□□ -0.54
PTCHD3-201ENST00000438700 OR5C1Q8NGR4 320 aa11.67□□□□□ -0.54
PTCHD3-201ENST00000438700 RNASE11Q8TAA1 199 aaKnown RBP11.67□□□□□ -0.54
PTCHD3-201ENST00000438700 LYRM2Q9NU23 88 aaPredicted RBP11.67□□□□□ -0.54
PTCHD3-201ENST00000438700 TAAR3PQ9P1P4 343 aa11.67□□□□□ -0.54
PTCHD3-201ENST00000438700 Q9UFV3 132 aa11.67□□□□□ -0.54
PTCHD3-201ENST00000438700 SPTA1P02549 2419 aa11.67□□□□□ -0.54
PTCHD3-201ENST00000438700 CADP27708 2225 aa11.67□□□□□ -0.54
PTCHD3-201ENST00000438700 IQCF6A8MYZ5 107 aa11.66□□□□□ -0.54
PTCHD3-201ENST00000438700 WNT9BO14905 357 aa11.66□□□□□ -0.54
PTCHD3-201ENST00000438700 CHST1O43916 411 aa11.66□□□□□ -0.54
PTCHD3-201ENST00000438700 TFF1P04155 84 aa11.66□□□□□ -0.54
PTCHD3-201ENST00000438700 SRP19P09132 144 aaKnown RBP11.66□□□□□ -0.54
PTCHD3-201ENST00000438700 TESK1Q15569 626 aa11.66□□□□□ -0.54
PTCHD3-201ENST00000438700 TIMM23BQ5SRD1 257 aa11.66□□□□□ -0.54
PTCHD3-201ENST00000438700 ABHD5Q8WTS1 349 aa11.66□□□□□ -0.54
PTCHD3-201ENST00000438700 STRAPQ9Y3F4 350 aaKnown RBP11.66□□□□□ -0.54
PTCHD3-201ENST00000438700 IGLV2-14P01704 120 aa11.66□□□□□ -0.54
PTCHD3-201ENST00000438700 FABP4P15090 132 aa11.66□□□□□ -0.54
PTCHD3-201ENST00000438700 ZNF429Q86V71 674 aa11.66□□□□□ -0.54
PTCHD3-201ENST00000438700 Q8IYB0 196 aa11.66□□□□□ -0.54
PTCHD3-201ENST00000438700 PLEKHF2Q9H8W4 249 aa11.66□□□□□ -0.54
PTCHD3-201ENST00000438700 ZNF835Q9Y2P0 537 aa11.66□□□□□ -0.54
PTCHD3-201ENST00000438700 PCNX1Q96RV3 2341 aa11.66□□□□□ -0.54
PTCHD3-201ENST00000438700 ZZEF1O43149 2961 aa11.66□□□□□ -0.54
PTCHD3-201ENST00000438700 A8MXE2 369 aa11.65□□□□□ -0.54
PTCHD3-201ENST00000438700 C1QTNF9BB2RNN3 333 aa11.65□□□□□ -0.54
PTCHD3-201ENST00000438700 MLNRO43193 412 aa11.65□□□□□ -0.54
PTCHD3-201ENST00000438700 PSPNO60542 156 aa11.65□□□□□ -0.54
PTCHD3-201ENST00000438700 C1QTNF9P0C862 333 aa11.65□□□□□ -0.54
PTCHD3-201ENST00000438700 HIST1H1BP16401 226 aaKnown RBP11.65□□□□□ -0.54
PTCHD3-201ENST00000438700 ID3Q02535 119 aa11.65□□□□□ -0.54
PTCHD3-201ENST00000438700 FAM27E3Q08E93 113 aa11.65□□□□□ -0.54
PTCHD3-201ENST00000438700 ODF3L1Q8IXM7 274 aa11.65□□□□□ -0.54
PTCHD3-201ENST00000438700 HIST3H2BBQ8N257 126 aa11.65□□□□□ -0.54
PTCHD3-201ENST00000438700 FAM169BQ8N8A8 192 aa11.65□□□□□ -0.54
PTCHD3-201ENST00000438700 FRZBQ92765 325 aa11.65□□□□□ -0.54
PTCHD3-201ENST00000438700 USF3Q68DE3 2245 aa11.65□□□□□ -0.54
PTCHD3-201ENST00000438700 DUXBA0A1W2PPF3 345 aa11.65□□□□□ -0.54
PTCHD3-201ENST00000438700 CLEC18AA5D8T8 446 aa11.65□□□□□ -0.54
PTCHD3-201ENST00000438700 M0R1B8 84 aa11.65□□□□□ -0.54
PTCHD3-201ENST00000438700 SH2D1BO14796 132 aa11.65□□□□□ -0.54
PTCHD3-201ENST00000438700 PITX3O75364 302 aa11.65□□□□□ -0.54
PTCHD3-201ENST00000438700 NDUFB7P17568 137 aa11.65□□□□□ -0.54
PTCHD3-201ENST00000438700 MDH2P40926 338 aaKnown RBP11.65□□□□□ -0.54
PTCHD3-201ENST00000438700 DYNLT3P51808 116 aa11.65□□□□□ -0.54
PTCHD3-201ENST00000438700 ZNF266Q14584 549 aa11.65□□□□□ -0.54
PTCHD3-201ENST00000438700 CLEC18CQ8NCF0 446 aa11.65□□□□□ -0.54
PTCHD3-201ENST00000438700 GPR146Q96CH1 333 aa11.65□□□□□ -0.54
PTCHD3-201ENST00000438700 UFSP2Q9NUQ7 469 aa11.65□□□□□ -0.54
PTCHD3-201ENST00000438700 HAND1O96004 215 aa11.64□□□□□ -0.55
PTCHD3-201ENST00000438700 TRGC1P0CF51 173 aa11.64□□□□□ -0.55
PTCHD3-201ENST00000438700 CEACAM6P40199 344 aa11.64□□□□□ -0.55
PTCHD3-201ENST00000438700 FABP6P51161 128 aa11.64□□□□□ -0.55
PTCHD3-201ENST00000438700 ICAM4Q14773 271 aa11.64□□□□□ -0.55
PTCHD3-201ENST00000438700 ZNF146Q15072 292 aa11.64□□□□□ -0.55
PTCHD3-201ENST00000438700 FAM53AQ6NSI3 398 aaPredicted RBP11.64□□□□□ -0.55
PTCHD3-201ENST00000438700 Q6ZRM9 215 aa11.64□□□□□ -0.55
PTCHD3-201ENST00000438700 SSX9Q7RTT3 188 aa11.64□□□□□ -0.55
PTCHD3-201ENST00000438700 SLC25A31Q9H0C2 315 aa11.64□□□□□ -0.55
PTCHD3-201ENST00000438700 MSL2Q9HCI7 577 aa11.64□□□□□ -0.55
PTCHD3-201ENST00000438700 PRAMEF6Q5VXH4 476 aa11.64□□□□□ -0.55
PTCHD3-201ENST00000438700 MOB1BQ7L9L4 216 aa11.64□□□□□ -0.55
PTCHD3-201ENST00000438700 GFOD1Q9NXC2 390 aa11.64□□□□□ -0.55
PTCHD3-201ENST00000438700 RNF115Q9Y4L5 304 aa11.64□□□□□ -0.55
PTCHD3-201ENST00000438700 SEC14L6B5MCN3 397 aa11.63□□□□□ -0.55
PTCHD3-201ENST00000438700 TIMM8AO60220 97 aaPredicted RBP11.63□□□□□ -0.55
PTCHD3-201ENST00000438700 SCAF4O95104 1147 aaKnown RBP11.63□□□□□ -0.55
PTCHD3-201ENST00000438700 IGKV1-39P01597 117 aa11.63□□□□□ -0.55
PTCHD3-201ENST00000438700 IGKV1D-39P04432 117 aa11.63□□□□□ -0.55
PTCHD3-201ENST00000438700 OR8G5Q8NG78 346 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms