RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 SSTR5P35346 364 aa15.54■□□□□ 0.08
CLK1-205ENST00000434813 MAS1LP35410 378 aa15.54■□□□□ 0.08
CLK1-205ENST00000434813 G6PCP35575 357 aa15.54■□□□□ 0.08
CLK1-205ENST00000434813 GLIPR1P48060 266 aa15.54■□□□□ 0.08
CLK1-205ENST00000434813 ZNF561Q8N587 486 aa15.54■□□□□ 0.08
CLK1-205ENST00000434813 LRRC29Q8WV35 223 aa15.54■□□□□ 0.08
CLK1-205ENST00000434813 MBD3L1Q8WWY6 194 aa15.54■□□□□ 0.08
CLK1-205ENST00000434813 KIAA2026Q5HYC2 2103 aa15.54■□□□□ 0.08
CLK1-205ENST00000434813 LAMA5O15230 3695 aa15.54■□□□□ 0.08
CLK1-205ENST00000434813 PRRC2CQ9Y520 2896 aaKnown RBP15.53■□□□□ 0.08
CLK1-205ENST00000434813 ODAMA1E959 279 aa15.53■□□□□ 0.08
CLK1-205ENST00000434813 S1PR2O95136 353 aa15.53■□□□□ 0.08
CLK1-205ENST00000434813 CLDN1O95832 211 aa15.53■□□□□ 0.08
CLK1-205ENST00000434813 KRASP01116 189 aa15.53■□□□□ 0.08
CLK1-205ENST00000434813 ARG1P05089 322 aa15.53■□□□□ 0.08
CLK1-205ENST00000434813 BRWD1-AS2P59051 145 aa15.53■□□□□ 0.08
CLK1-205ENST00000434813 SLC38A11Q08AI6 406 aa15.53■□□□□ 0.08
CLK1-205ENST00000434813 ZNF816Q0VGE8 651 aaPredicted RBP15.53■□□□□ 0.08
CLK1-205ENST00000434813 OR2B11Q5JQS5 317 aa15.53■□□□□ 0.08
CLK1-205ENST00000434813 BEND4Q6ZU67 534 aa15.53■□□□□ 0.08
CLK1-205ENST00000434813 SEM1Q6ZVN7 128 aa15.53■□□□□ 0.08
CLK1-205ENST00000434813 TCTEX1D2Q8WW35 142 aa15.53■□□□□ 0.08
CLK1-205ENST00000434813 MALSU1Q96EH3 234 aa15.53■□□□□ 0.08
CLK1-205ENST00000434813 VSIRQ9H7M9 311 aa15.53■□□□□ 0.08
CLK1-205ENST00000434813 LRRC30A6NM36 301 aa15.53■□□□□ 0.08
CLK1-205ENST00000434813 C17orf98A8MV24 154 aa15.53■□□□□ 0.08
CLK1-205ENST00000434813 EIF2S3P41091 472 aaKnown RBP15.53■□□□□ 0.08
CLK1-205ENST00000434813 ZNF66Q6ZN08 573 aa15.53■□□□□ 0.08
CLK1-205ENST00000434813 CD177Q8N6Q3 437 aa15.53■□□□□ 0.08
CLK1-205ENST00000434813 PINX1Q96BK5 328 aaKnown RBP15.53■□□□□ 0.08
CLK1-205ENST00000434813 RAB39BQ96DA2 213 aa15.53■□□□□ 0.08
CLK1-205ENST00000434813 YPEL4Q96NS1 127 aa15.53■□□□□ 0.08
CLK1-205ENST00000434813 OR4C12Q96R67 309 aa15.53■□□□□ 0.08
CLK1-205ENST00000434813 SCNM1Q9BWG6 230 aa15.53■□□□□ 0.08
CLK1-205ENST00000434813 LAMP3Q9UQV4 416 aa15.53■□□□□ 0.08
CLK1-205ENST00000434813 C15orf65H3BRN8 121 aa15.52■□□□□ 0.08
CLK1-205ENST00000434813 CLDN14O95500 239 aa15.52■□□□□ 0.08
CLK1-205ENST00000434813 HTD2P86397 168 aa15.52■□□□□ 0.08
CLK1-205ENST00000434813 ZNF726P1Q15940 193 aa15.52■□□□□ 0.08
CLK1-205ENST00000434813 ZNF787Q6DD87 383 aa15.52■□□□□ 0.08
CLK1-205ENST00000434813 ZNF429Q86V71 674 aa15.52■□□□□ 0.08
CLK1-205ENST00000434813 FAM24BQ8N5W8 94 aa15.52■□□□□ 0.08
CLK1-205ENST00000434813 TPRX1Q8N7U7 411 aa15.52■□□□□ 0.08
CLK1-205ENST00000434813 RCC1LQ96I51 464 aaKnown RBP15.52■□□□□ 0.08
CLK1-205ENST00000434813 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.52■□□□□ 0.08
CLK1-205ENST00000434813 TIMM9Q9Y5J7 89 aa15.52■□□□□ 0.08
CLK1-205ENST00000434813 A0A087WWC5 75 aa15.51■□□□□ 0.07
CLK1-205ENST00000434813 hCG_1809904A0A1W2PP81 198 aa15.51■□□□□ 0.07
CLK1-205ENST00000434813 A0A1W2PR64 198 aa15.51■□□□□ 0.07
CLK1-205ENST00000434813 A0A1W2PRV1 198 aa15.51■□□□□ 0.07
CLK1-205ENST00000434813 SRRM5B3KS81 715 aa15.51■□□□□ 0.07
CLK1-205ENST00000434813 ZNF737O75373 536 aa15.51■□□□□ 0.07
CLK1-205ENST00000434813 ADH4P08319 380 aa15.51■□□□□ 0.07
CLK1-205ENST00000434813 BCL2P10415 239 aa15.51■□□□□ 0.07
CLK1-205ENST00000434813 TMEM41BQ5BJD5 291 aa15.51■□□□□ 0.07
CLK1-205ENST00000434813 BTNL3Q6UXE8 466 aa15.51■□□□□ 0.07
CLK1-205ENST00000434813 TAF15Q92804 592 aaKnown RBP eCLIP15.51■□□□□ 0.07
CLK1-205ENST00000434813 NIPSNAP3BQ9BS92 247 aa15.51■□□□□ 0.07
CLK1-205ENST00000434813 GNG13Q9P2W3 67 aa15.51■□□□□ 0.07
CLK1-205ENST00000434813 UBE2L5PA0A1B0GUS4 154 aa15.51■□□□□ 0.07
CLK1-205ENST00000434813 ZNF98A6NK75 572 aa15.51■□□□□ 0.07
CLK1-205ENST00000434813 RAB29O14966 203 aa15.51■□□□□ 0.07
CLK1-205ENST00000434813 SPINT2O43291 252 aa15.51■□□□□ 0.07
CLK1-205ENST00000434813 OR2C1O95371 312 aa15.51■□□□□ 0.07
CLK1-205ENST00000434813 FBP1P09467 338 aa15.51■□□□□ 0.07
CLK1-205ENST00000434813 CEBPGP53567 150 aa15.51■□□□□ 0.07
CLK1-205ENST00000434813 SLC35E3Q7Z769 313 aa15.51■□□□□ 0.07
CLK1-205ENST00000434813 FAM90A1Q86YD7 464 aa15.51■□□□□ 0.07
CLK1-205ENST00000434813 OR2Z1Q8NG97 314 aa15.51■□□□□ 0.07
CLK1-205ENST00000434813 HSD17B10Q99714 261 aaKnown RBP15.51■□□□□ 0.07
CLK1-205ENST00000434813 CISD1Q9NZ45 108 aaKnown RBP15.51■□□□□ 0.07
CLK1-205ENST00000434813 CHD3Q12873 2000 aaKnown RBP15.5■□□□□ 0.07
CLK1-205ENST00000434813 INTS1Q8N201 2190 aaKnown RBP15.5■□□□□ 0.07
CLK1-205ENST00000434813 EGR1P18146 543 aa15.5■□□□□ 0.07
CLK1-205ENST00000434813 PRDX2P32119 198 aa15.5■□□□□ 0.07
CLK1-205ENST00000434813 SSX7Q7RTT5 188 aa15.5■□□□□ 0.07
CLK1-205ENST00000434813 FAM216AQ8WUB2 273 aa15.5■□□□□ 0.07
CLK1-205ENST00000434813 MUCL1Q96DR8 90 aa15.5■□□□□ 0.07
CLK1-205ENST00000434813 TVP23CQ96ET8 276 aa15.5■□□□□ 0.07
CLK1-205ENST00000434813 AGMATQ9BSE5 352 aa15.5■□□□□ 0.07
CLK1-205ENST00000434813 SEBOXQ9HB31 216 aaPredicted RBP15.5■□□□□ 0.07
CLK1-205ENST00000434813 IGHV3-43A0A0B4J1X8 118 aa15.5■□□□□ 0.07
CLK1-205ENST00000434813 C5orf52A6NGY3 159 aa15.5■□□□□ 0.07
CLK1-205ENST00000434813 IGHV3-43DP0DP04 118 aa15.5■□□□□ 0.07
CLK1-205ENST00000434813 CFHR2P36980 270 aa15.5■□□□□ 0.07
CLK1-205ENST00000434813 ATP6V1FQ16864 119 aa15.5■□□□□ 0.07
CLK1-205ENST00000434813 MSMPQ1L6U9 139 aa15.5■□□□□ 0.07
CLK1-205ENST00000434813 Q3ZCU0 254 aa15.5■□□□□ 0.07
CLK1-205ENST00000434813 OR8G2PQ6IF36 304 aa15.5■□□□□ 0.07
CLK1-205ENST00000434813 Q6ZS92 163 aa15.5■□□□□ 0.07
CLK1-205ENST00000434813 CENPVQ7Z7K6 275 aaPredicted RBP15.5■□□□□ 0.07
CLK1-205ENST00000434813 MRPL37Q9BZE1 423 aaKnown RBP15.5■□□□□ 0.07
CLK1-205ENST00000434813 ZNF665Q9H7R5 613 aa15.5■□□□□ 0.07
CLK1-205ENST00000434813 LINC00473A8K010 186 aa15.49■□□□□ 0.07
CLK1-205ENST00000434813 MKRN2OSH3BPM6 223 aa15.49■□□□□ 0.07
CLK1-205ENST00000434813 ST8SIA5O15466 376 aa15.49■□□□□ 0.07
CLK1-205ENST00000434813 SNRPEP62304 92 aaKnown RBP15.49■□□□□ 0.07
CLK1-205ENST00000434813 DLK1P80370 383 aa15.49■□□□□ 0.07
CLK1-205ENST00000434813 EIF2S3LQ2VIR3 472 aaKnown RBP15.49■□□□□ 0.07
CLK1-205ENST00000434813 LCN15Q6UWW0 184 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms