RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 BARX1Q9HBU1 254 aaPredicted RBP6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 AP5S1Q9NUS5 200 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 OCIAD1Q9NX40 245 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 POLDIP2Q9Y2S7 368 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 AHRRA9YTQ3 701 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 C3orf80F5H4A9 247 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 SYNGR2O43760 224 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 IL6RP08887 468 aaPredicted RBP6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 GAGE2BQ13066 116 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 GAGE2EQ4V326 116 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 C1orf140Q5VVS0 124 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 H1FNTQ75WM6 255 aaPredicted RBP6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 SPRED2Q7Z698 418 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 OR51G1Q8NGK1 321 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 MEGF9Q9H1U4 602 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 GAGE2DQ9UEU5 116 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 ATG2AQ2TAZ0 1938 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 A0A1W2PR80 420 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 C9JCJ5 164 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 ZNF217O75362 1048 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 EWSR1Q01844 656 aaKnown RBP eCLIP6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 PERPQ96FX8 193 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 CLCF1Q9UBD9 225 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 IFNL4K9M1U5 179 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 CEACAM3P40198 252 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 TMEM255AQ5JRV8 349 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 WDR25Q64LD2 544 aaPredicted RBP6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 C17orf51A8MQB3 221 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 PDCD6O75340 191 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 ZNF766Q5HY98 468 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 ZNF793Q6ZN11 406 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 BADQ92934 168 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 LINC00470Q9BZP3 86 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 CDC42EP2O14613 210 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 FAM157CP0CG43 387 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 TMEM30BQ3MIR4 351 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 OR10G7Q8NGN6 311 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 NXT1Q9UKK6 140 aaKnown RBP6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 SSUH2Q9Y2M2 353 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 SPINT2O43291 252 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 MFAP5Q13361 173 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 TWIST1Q15672 202 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 OR4D11Q8NGI4 311 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 RAB1CQ92928 201 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 ATXN7O15265 892 aaPredicted RBP6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 ZFAND5O76080 213 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 TIAF1O95411 115 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 FUT6P51993 359 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 RHOGP84095 191 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 RBPJQ06330 500 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 FBXL14Q8N1E6 418 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 NOXO1Q8NFA2 376 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 SLC25A40Q8TBP6 338 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 OR2D2Q9H210 308 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 SDF2L1Q9HCN8 221 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 FGF21Q9NSA1 209 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 ZFP36L2P47974 494 aaKnown RBP6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 REG1BP48304 166 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 OR5D13Q8NGL4 314 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 OR1L6Q8NGR2 347 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 FBXO17Q96EF6 278 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 FER1L6-AS2Q96M78 137 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 ZNF703Q9H7S9 590 aaPredicted RBP6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 HCFC2Q9Y5Z7 792 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 C10orf126Q8N4M7 172 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 RARRES3Q9UL19 164 aa6.57□□□□□ -1.36
SYNPO2-202ENST00000429713 SNURFLB1AK76 121 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 E9PQ18 207 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 OR1L4Q8NGR5 311 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 SIVA1O15304 175 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 DHRS3O75911 302 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 GPR183P32249 361 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 ANKRD30BLA7E2S9 258 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 ZNF205O95201 554 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 FAM87AP0C7U9 286 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 TDGF1P13385 188 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 SELEP16581 610 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 BCL3P20749 454 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 CLDN17P56750 224 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 SSBP2P81877 361 aaPredicted RBP6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 RAX2Q96IS3 184 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 FAM103A1Q9BTL3 118 aaKnown RBP6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 TMEM189A5PLL7 270 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 C2orf68Q2NKX9 166 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 DEFB133Q30KQ1 61 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 NT5CQ8TCD5 201 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 MRPL38Q96DV4 380 aaKnown RBP6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 MRPL18Q9H0U6 180 aaKnown RBP6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 HEYLQ9NQ87 328 aaPredicted RBP6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 TOMM40O96008 361 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 LINC01545Q5VT33 79 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 KIRREL2Q6UWL6 708 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 SLC37A2Q8TED4 501 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 SIGLEC12Q96PQ1 595 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 LHX9Q9NQ69 397 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 HINT1P49773 126 aaPredicted RBP6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 SP7Q8TDD2 431 aaPredicted RBP6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 OR5P3Q8WZ94 311 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 GEMIN7Q9H840 131 aaKnown RBP6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 HS3ST1O14792 307 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms