RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 ANXA10Q9UJ72 324 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 TRAV38-1A0A0B4J264 116 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 LRP5LA4QPB2 252 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 SHISA7A6NL88 538 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 H7C1C5 153 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 TNFRSF13BO14836 293 aaPredicted RBP7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 PHF1O43189 567 aaPredicted RBP7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 HBZP02008 142 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 VDAC1P21796 283 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 SSTR5P35346 364 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 CA7P43166 264 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 PAX9P55771 341 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 PLCXD2Q0VAA5 305 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 LRRC75BQ2VPJ9 315 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 CXorf66Q5JRM2 361 aaPredicted RBP7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 CDCP2Q5VXM1 449 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 MARCH3Q86UD3 253 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 OR10G8Q8NGN5 311 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 GALMQ96C23 342 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 GPR82Q96P67 336 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 RTN4RQ9BZR6 473 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 HES4Q9HCC6 221 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 TMEM140Q9NV12 185 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 TIMM9Q9Y5J7 89 aa7.54□□□□□ -1.2
CDC42BPA-206ENST00000429440 IGKV1D-8A0A087WSZ0 117 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 CTXND1A0A1B0GTU2 59 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 A6NDN8 102 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 SLC22A20A6NK97 555 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 SLC17A3O00476 420 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 CRXO43186 299 aaPredicted RBP7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 CHST1O43916 411 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 CLDN1O95832 211 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 HLA-DQA2P01906 255 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 ADH4P08319 380 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 NPPCP23582 126 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 GPR183P32249 361 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 ARF1P84077 181 aaKnown RBP7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 Q56UQ5 140 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 DCAF12Q5T6F0 453 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 RPP25LQ8N5L8 163 aaKnown RBP7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 ZNF439Q8NDP4 499 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 OR10AG1Q8NH19 301 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 DOK4Q8TEW6 326 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 RAB1CQ92928 201 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 ADAT3Q96EY9 351 aaPredicted RBP7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 OR2A5Q96R48 311 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 PMCHL2Q9BQD1 86 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 TMEM222Q9H0R3 208 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 FAM60AQ9NP50 221 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 PNRC2Q9NPJ4 139 aaKnown RBP7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 NECAP2Q9NVZ3 263 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 ERG28Q9UKR5 140 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 A0A0C4DFX4 3053 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 EYSQ5T1H1 3165 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 FAM181BA6NEQ2 426 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 AGFG2O95081 481 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 SERPINE2P07093 398 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 ASAH2BP0C7U1 165 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 FAM87AP0C7U9 286 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 IER3P46695 156 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 TSPO2Q5TGU0 170 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 CHRDL2Q6WN34 429 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 RNF44Q7L0R7 432 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 C2orf73Q8N5S3 287 aaPredicted RBP7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 SUMF1Q8NBK3 374 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 C10orf35Q96D05 121 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 JMJD8Q96S16 334 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 PKIBQ9C010 78 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 MS4A6AQ9H2W1 248 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 LIME1Q9H400 295 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 C12orf49Q9H741 205 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 WNT16Q9UBV4 365 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 B3GALT1Q9Y5Z6 326 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 DOCK11Q5JSL3 2073 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 GTF3C1Q12789 2109 aa7.53□□□□□ -1.2
CDC42BPA-206ENST00000429440 A0A0J9YY10 115 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 EDDM13A0A1B0GTR0 161 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 A0A1B0GX78 115 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 C2orf70A6NJV1 201 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 GRXCR1A8MXD5 290 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 SOX1O00570 391 aaPredicted RBP7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 BLVRBP30043 206 aaPredicted RBP7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 EMDP50402 254 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 DPTQ07507 201 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 AESQ08117 197 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 FHL5Q5TD97 284 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 SPATA12Q7Z6I5 190 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 DOLPP1Q86YN1 238 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 OR51T1Q8NGJ9 327 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 METTL7AQ9H8H3 244 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 TRPM6Q9BX84 2022 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 IGKV1D-42A0A075B6H8 117 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 C4orf51C9J302 202 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 ADAM20O43506 726 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 POU2F2P09086 479 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 PEBP1P30086 187 aaKnown RBP7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 NTSR1P30989 418 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 RPL32P62910 135 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms