RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 GPX5O75715 221 aa10.59□□□□□ -0.71
HDAC6-206ENST00000426196 GLAP06280 429 aa10.59□□□□□ -0.71
HDAC6-206ENST00000426196 BDKRB2P30411 391 aa10.59□□□□□ -0.71
HDAC6-206ENST00000426196 PRR20EP86478 221 aa10.59□□□□□ -0.71
HDAC6-206ENST00000426196 PRR20CP86479 221 aa10.59□□□□□ -0.71
HDAC6-206ENST00000426196 PRR20DP86480 221 aa10.59□□□□□ -0.71
HDAC6-206ENST00000426196 PRR20BP86481 221 aa10.59□□□□□ -0.71
HDAC6-206ENST00000426196 PRR20AP86496 221 aa10.59□□□□□ -0.71
HDAC6-206ENST00000426196 DEFB135Q30KP9 77 aa10.59□□□□□ -0.71
HDAC6-206ENST00000426196 ANKRD55Q3KP44 614 aa10.59□□□□□ -0.71
HDAC6-206ENST00000426196 C5orf24Q7Z6I8 188 aa10.59□□□□□ -0.71
HDAC6-206ENST00000426196 IL1F10Q8WWZ1 152 aa10.59□□□□□ -0.71
HDAC6-206ENST00000426196 THRSPQ92748 146 aa10.59□□□□□ -0.71
HDAC6-206ENST00000426196 CIB1Q99828 191 aa10.59□□□□□ -0.71
HDAC6-206ENST00000426196 IMPAD1Q9NX62 359 aa10.59□□□□□ -0.71
HDAC6-206ENST00000426196 ABRACLQ9P1F3 81 aa10.59□□□□□ -0.71
HDAC6-206ENST00000426196 TCRBV3S1A0A5B6 114 aa10.58□□□□□ -0.72
HDAC6-206ENST00000426196 H3BNX3 289 aa10.58□□□□□ -0.72
HDAC6-206ENST00000426196 TUSC2O75896 110 aa10.58□□□□□ -0.72
HDAC6-206ENST00000426196 IGKV1-16P04430 117 aa10.58□□□□□ -0.72
HDAC6-206ENST00000426196 FUT3P21217 361 aa10.58□□□□□ -0.72
HDAC6-206ENST00000426196 GBX2P52951 348 aaPredicted RBP10.58□□□□□ -0.72
HDAC6-206ENST00000426196 RIPK1Q13546 671 aa10.58□□□□□ -0.72
HDAC6-206ENST00000426196 EXOSC2Q13868 293 aaKnown RBP10.58□□□□□ -0.72
HDAC6-206ENST00000426196 LHFPL3Q86UP9 236 aa10.58□□□□□ -0.72
HDAC6-206ENST00000426196 ZDHHC13Q8IUH4 622 aa10.58□□□□□ -0.72
HDAC6-206ENST00000426196 MRPL30Q8TCC3 161 aaKnown RBP10.58□□□□□ -0.72
HDAC6-206ENST00000426196 GPR148Q8TDV2 347 aa10.58□□□□□ -0.72
HDAC6-206ENST00000426196 ZNF184Q99676 751 aaPredicted RBP10.58□□□□□ -0.72
HDAC6-206ENST00000426196 SULT4A1Q9BR01 284 aa10.58□□□□□ -0.72
HDAC6-206ENST00000426196 THTPAQ9BU02 230 aa10.58□□□□□ -0.72
HDAC6-206ENST00000426196 GABARAPL1Q9H0R8 117 aa10.58□□□□□ -0.72
HDAC6-206ENST00000426196 ISG20L2Q9H9L3 353 aaKnown RBP10.58□□□□□ -0.72
HDAC6-206ENST00000426196 FAM90A7PA6NKC0 464 aa10.57□□□□□ -0.72
HDAC6-206ENST00000426196 FAM223BA6NKX1 122 aa10.57□□□□□ -0.72
HDAC6-206ENST00000426196 FAM90A23PA8MXZ1 464 aa10.57□□□□□ -0.72
HDAC6-206ENST00000426196 UBE2CO00762 179 aa10.57□□□□□ -0.72
HDAC6-206ENST00000426196 APOA2P02652 100 aa10.57□□□□□ -0.72
HDAC6-206ENST00000426196 CALB2P22676 271 aa10.57□□□□□ -0.72
HDAC6-206ENST00000426196 POLR2IP36954 125 aaKnown RBP10.57□□□□□ -0.72
HDAC6-206ENST00000426196 SSBP2P81877 361 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-206ENST00000426196 HMGN3Q15651 99 aa10.57□□□□□ -0.72
HDAC6-206ENST00000426196 PDPNQ86YL7 162 aa10.57□□□□□ -0.72
HDAC6-206ENST00000426196 FAM223AQ8IWN6 122 aa10.57□□□□□ -0.72
HDAC6-206ENST00000426196 TMEM61Q8N0U2 210 aa10.57□□□□□ -0.72
HDAC6-206ENST00000426196 TRUB1Q8WWH5 349 aaKnown RBP10.57□□□□□ -0.72
HDAC6-206ENST00000426196 ABHD14BQ96IU4 210 aa10.57□□□□□ -0.72
HDAC6-206ENST00000426196 PHB2Q99623 299 aa10.57□□□□□ -0.72
HDAC6-206ENST00000426196 GABARAPL3Q9BY60 117 aa10.57□□□□□ -0.72
HDAC6-206ENST00000426196 SNTNA6NMZ2 147 aa10.56□□□□□ -0.72
HDAC6-206ENST00000426196 E9PI62 339 aa10.56□□□□□ -0.72
HDAC6-206ENST00000426196 RBMXL2O75526 392 aaKnown RBP10.56□□□□□ -0.72
HDAC6-206ENST00000426196 FASP25445 335 aa10.56□□□□□ -0.72
HDAC6-206ENST00000426196 CAPGP40121 348 aa10.56□□□□□ -0.72
HDAC6-206ENST00000426196 MAP2K4P45985 399 aa10.56□□□□□ -0.72
HDAC6-206ENST00000426196 RHOGP84095 191 aa10.56□□□□□ -0.72
HDAC6-206ENST00000426196 TM4SF20Q53R12 229 aa10.56□□□□□ -0.72
HDAC6-206ENST00000426196 ZNF57Q68EA5 555 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-206ENST00000426196 SELENOIQ9C0D9 397 aa10.56□□□□□ -0.72
HDAC6-206ENST00000426196 ZNF230Q9UIE0 474 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-206ENST00000426196 EXOGQ9Y2C4 368 aaKnown RBP10.56□□□□□ -0.72
HDAC6-206ENST00000426196 A0A1B0GVY2 172 aa10.55□□□□□ -0.72
HDAC6-206ENST00000426196 PDCD6O75340 191 aa10.55□□□□□ -0.72
HDAC6-206ENST00000426196 IFNA4P05014 189 aa10.55□□□□□ -0.72
HDAC6-206ENST00000426196 OR9G9P0C7N8 305 aa10.55□□□□□ -0.72
HDAC6-206ENST00000426196 APELAP0DMC3 54 aa10.55□□□□□ -0.72
HDAC6-206ENST00000426196 EDN2P20800 178 aa10.55□□□□□ -0.72
HDAC6-206ENST00000426196 TCTAP57738 103 aa10.55□□□□□ -0.72
HDAC6-206ENST00000426196 ZNF45Q02386 682 aa10.55□□□□□ -0.72
HDAC6-206ENST00000426196 ATP5G2Q06055 141 aa10.55□□□□□ -0.72
HDAC6-206ENST00000426196 PJVKQ0ZLH3 352 aa10.55□□□□□ -0.72
HDAC6-206ENST00000426196 FAM209BQ5JX69 171 aa10.55□□□□□ -0.72
HDAC6-206ENST00000426196 MEDAGQ5VYS4 303 aa10.55□□□□□ -0.72
HDAC6-206ENST00000426196 AWAT2Q6E213 333 aa10.55□□□□□ -0.72
HDAC6-206ENST00000426196 GLIPR1L1Q6UWM5 242 aa10.55□□□□□ -0.72
HDAC6-206ENST00000426196 DRAXINQ8NBI3 349 aaPredicted RBP10.55□□□□□ -0.72
HDAC6-206ENST00000426196 ADAD2Q8NCV1 583 aaKnown RBP10.55□□□□□ -0.72
HDAC6-206ENST00000426196 KCNG3Q8TAE7 436 aa10.55□□□□□ -0.72
HDAC6-206ENST00000426196 MUL1Q969V5 352 aa10.55□□□□□ -0.72
HDAC6-206ENST00000426196 RNF183Q96D59 192 aa10.55□□□□□ -0.72
HDAC6-206ENST00000426196 MFFQ9GZY8 342 aa10.55□□□□□ -0.72
HDAC6-206ENST00000426196 BANF2Q9H503 90 aa10.55□□□□□ -0.72
HDAC6-206ENST00000426196 MED4Q9NPJ6 270 aa10.55□□□□□ -0.72
HDAC6-206ENST00000426196 AKIP1Q9NQ31 210 aa10.55□□□□□ -0.72
HDAC6-206ENST00000426196 HSPG2P98160 4391 aa10.54□□□□□ -0.72
HDAC6-206ENST00000426196 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.54□□□□□ -0.72
HDAC6-206ENST00000426196 ITGB1BP1O14713 200 aa10.54□□□□□ -0.72
HDAC6-206ENST00000426196 SCAF4O95104 1147 aaKnown RBP10.54□□□□□ -0.72
HDAC6-206ENST00000426196 BAG2O95816 211 aa10.54□□□□□ -0.72
HDAC6-206ENST00000426196 MGMTP16455 207 aa10.54□□□□□ -0.72
HDAC6-206ENST00000426196 CBLN1P23435 193 aa10.54□□□□□ -0.72
HDAC6-206ENST00000426196 RBMS2Q15434 407 aaKnown RBP10.54□□□□□ -0.72
HDAC6-206ENST00000426196 ATP6AP1Q15904 470 aa10.54□□□□□ -0.72
HDAC6-206ENST00000426196 SLC25A30Q5SVS4 291 aa10.54□□□□□ -0.72
HDAC6-206ENST00000426196 SIGIRRQ6IA17 410 aa10.54□□□□□ -0.72
HDAC6-206ENST00000426196 JAGN1Q8N5M9 183 aa10.54□□□□□ -0.72
HDAC6-206ENST00000426196 STPG3Q8N7X2 389 aa10.54□□□□□ -0.72
HDAC6-206ENST00000426196 EDARADDQ8WWZ3 215 aa10.54□□□□□ -0.72
HDAC6-206ENST00000426196 CACNG8Q8WXS5 425 aa10.54□□□□□ -0.72
HDAC6-206ENST00000426196 LGALS12Q96DT0 336 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms