RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 CEACAM3P40198 252 aa5.73□□□□□ -1.49
EPHA4-206ENST00000424339 ECI1P42126 302 aa5.73□□□□□ -1.49
EPHA4-206ENST00000424339 OR3A3P47888 321 aa5.73□□□□□ -1.49
EPHA4-206ENST00000424339 ARHGDIBP52566 201 aa5.73□□□□□ -1.49
EPHA4-206ENST00000424339 LGALS4P56470 323 aa5.73□□□□□ -1.49
EPHA4-206ENST00000424339 LOXL3P58215 753 aa5.73□□□□□ -1.49
EPHA4-206ENST00000424339 TAS2R19P59542 299 aa5.73□□□□□ -1.49
EPHA4-206ENST00000424339 CHRFAM7AQ494W8 412 aa5.73□□□□□ -1.49
EPHA4-206ENST00000424339 MINOS1Q5TGZ0 78 aa5.73□□□□□ -1.49
EPHA4-206ENST00000424339 THOC7Q6I9Y2 204 aaKnown RBP5.73□□□□□ -1.49
EPHA4-206ENST00000424339 TMEM17Q86X19 198 aa5.73□□□□□ -1.49
EPHA4-206ENST00000424339 LINC00311Q8N616 119 aa5.73□□□□□ -1.49
EPHA4-206ENST00000424339 Q8N7P7 452 aa5.73□□□□□ -1.49
EPHA4-206ENST00000424339 OR11H4Q8NGC9 324 aa5.73□□□□□ -1.49
EPHA4-206ENST00000424339 OR5AP2Q8NGF4 316 aa5.73□□□□□ -1.49
EPHA4-206ENST00000424339 ZNF431Q8TF32 576 aaPredicted RBP5.73□□□□□ -1.49
EPHA4-206ENST00000424339 CCDC107Q8WV48 283 aa5.73□□□□□ -1.49
EPHA4-206ENST00000424339 IL1F10Q8WWZ1 152 aa5.73□□□□□ -1.49
EPHA4-206ENST00000424339 SNAPC3Q92966 411 aa5.73□□□□□ -1.49
EPHA4-206ENST00000424339 TBX15Q96SF7 602 aa5.73□□□□□ -1.49
EPHA4-206ENST00000424339 HDHD3Q9BSH5 251 aaPredicted RBP5.73□□□□□ -1.49
EPHA4-206ENST00000424339 PCGF1Q9BSM1 259 aa5.73□□□□□ -1.49
EPHA4-206ENST00000424339 ST6GALNAC5Q9BVH7 336 aa5.73□□□□□ -1.49
EPHA4-206ENST00000424339 TOLLIPQ9H0E2 274 aa5.73□□□□□ -1.49
EPHA4-206ENST00000424339 YAE1D1Q9NRH1 226 aa5.73□□□□□ -1.49
EPHA4-206ENST00000424339 GFOD1Q9NXC2 390 aa5.73□□□□□ -1.49
EPHA4-206ENST00000424339 SCP2D1Q9UJQ7 156 aa5.73□□□□□ -1.49
EPHA4-206ENST00000424339 NUP50Q9UKX7 468 aa5.73□□□□□ -1.49
EPHA4-206ENST00000424339 TBL2Q9Y4P3 447 aaKnown RBP5.73□□□□□ -1.49
EPHA4-206ENST00000424339 MINOS1-NBL1R4GNA1 71 aa5.73□□□□□ -1.49
EPHA4-206ENST00000424339 OTOGQ6ZRI0 2925 aa5.73□□□□□ -1.49
EPHA4-206ENST00000424339 HIVEP2P31629 2446 aa5.73□□□□□ -1.49
EPHA4-206ENST00000424339 IGHV2-26A0A0B4J1V2 119 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 TRAV40A0A0B4J280 105 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 IGHV1-69DA0A0B4J2H0 117 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 LINC00862A6NCI5 91 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 CYSRT1A8MQ03 144 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 SNRPGP15A8MWD9 76 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 OOSP1A8MZH6 123 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 ZNF736B4DX44 427 aaPredicted RBP5.72□□□□□ -1.49
EPHA4-206ENST00000424339 TXNL1O43396 289 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 NDUFB6O95139 128 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 LY6G6DO95868 133 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 IGLV1-47P01700 117 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 IGHV1-69P01742 117 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 NFYBP25208 207 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 ZNF137PP52743 207 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 MEF2DQ14814 521 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 MSMO1Q15800 293 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 MORN2Q502X0 79 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 RNASE10Q5GAN6 216 aaKnown RBP5.72□□□□□ -1.49
EPHA4-206ENST00000424339 VAX1Q5SQQ9 334 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 FAM120AOSQ5T036 256 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 PRAMEF5Q5TYX0 476 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 ZNF626Q68DY1 528 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 CCDC144NLQ6NUI1 221 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 FAM71F2Q6NXP2 309 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 GLDNQ6ZMI3 551 aaPredicted RBP5.72□□□□□ -1.49
EPHA4-206ENST00000424339 C9orf139Q6ZV77 190 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 ABHD12Q8N2K0 398 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 PRR18Q8N4B5 295 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 ARRDC1Q8N5I2 433 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 TMEM229BQ8NBD8 167 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.72□□□□□ -1.49
EPHA4-206ENST00000424339 OR2AK2Q8NG84 335 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 OR5H2Q8NGV7 314 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 RFESDQ8TAC1 157 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 GCDHQ92947 438 aaPredicted RBP5.72□□□□□ -1.49
EPHA4-206ENST00000424339 GINS4Q9BRT9 223 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 PIPOXQ9P0Z9 390 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 F8P00451 2351 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 NAV3Q8IVL0 2385 aa5.72□□□□□ -1.49
EPHA4-206ENST00000424339 TRAV39A0A0B4J263 110 aa5.71□□□□□ -1.5
EPHA4-206ENST00000424339 CENPVL3A0A0U1RRI6 287 aa5.71□□□□□ -1.5
EPHA4-206ENST00000424339 RPS10-NUDT3A0A1W2PQS6 291 aa5.71□□□□□ -1.5
EPHA4-206ENST00000424339 ODF3BA8MYP8 253 aa5.71□□□□□ -1.5
EPHA4-206ENST00000424339 LEUTXA8MZ59 168 aa5.71□□□□□ -1.5
EPHA4-206ENST00000424339 RNASEK-C17orf49H0YIS7 233 aa5.71□□□□□ -1.5
EPHA4-206ENST00000424339 J3QR06 171 aa5.71□□□□□ -1.5
EPHA4-206ENST00000424339 NPFFO15130 113 aa5.71□□□□□ -1.5
EPHA4-206ENST00000424339 ARPC1BO15143 372 aaKnown RBP5.71□□□□□ -1.5
EPHA4-206ENST00000424339 OR2A4O95047 310 aa5.71□□□□□ -1.5
EPHA4-206ENST00000424339 CD74P04233 296 aa5.71□□□□□ -1.5
EPHA4-206ENST00000424339 IFNA6P05013 189 aa5.71□□□□□ -1.5
EPHA4-206ENST00000424339 GIPP09681 153 aaPredicted RBP5.71□□□□□ -1.5
EPHA4-206ENST00000424339 SCTP09683 121 aa5.71□□□□□ -1.5
EPHA4-206ENST00000424339 OR5H8P0DN80 308 aa5.71□□□□□ -1.5
EPHA4-206ENST00000424339 OMGP23515 440 aa5.71□□□□□ -1.5
EPHA4-206ENST00000424339 HTR1DP28221 377 aa5.71□□□□□ -1.5
EPHA4-206ENST00000424339 SRP14P37108 136 aaKnown RBP5.71□□□□□ -1.5
EPHA4-206ENST00000424339 AANATQ16613 207 aa5.71□□□□□ -1.5
EPHA4-206ENST00000424339 HLA-DRB5Q30154 266 aa5.71□□□□□ -1.5
EPHA4-206ENST00000424339 LGALSLQ3ZCW2 172 aaPredicted RBP5.71□□□□□ -1.5
EPHA4-206ENST00000424339 LPCAT3Q6P1A2 487 aa5.71□□□□□ -1.5
EPHA4-206ENST00000424339 Q6ZPA2 131 aa5.71□□□□□ -1.5
EPHA4-206ENST00000424339 SLC25A48Q6ZT89 311 aaKnown RBP5.71□□□□□ -1.5
EPHA4-206ENST00000424339 OVCH2Q7RTZ1 564 aa5.71□□□□□ -1.5
EPHA4-206ENST00000424339 H1FOOQ8IZA3 346 aaPredicted RBP5.71□□□□□ -1.5
EPHA4-206ENST00000424339 ZNF680Q8NEM1 530 aa5.71□□□□□ -1.5
EPHA4-206ENST00000424339 OR10X1Q8NGY0 326 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms