RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 MCFD2Q8NI22 146 aa12.58□□□□□ -0.4
BRAT1-202ENST00000421712 RBMXL1Q96E39 390 aaKnown RBP12.58□□□□□ -0.4
BRAT1-202ENST00000421712 DCUN1D5Q9BTE7 237 aa12.58□□□□□ -0.4
BRAT1-202ENST00000421712 SH2D7A6NKC9 451 aaPredicted RBP12.57□□□□□ -0.4
BRAT1-202ENST00000421712 CT45A6P0DMU7 189 aa12.57□□□□□ -0.4
BRAT1-202ENST00000421712 CT45A5P0DMU8 189 aa12.57□□□□□ -0.4
BRAT1-202ENST00000421712 CT45A7P0DMV0 189 aa12.57□□□□□ -0.4
BRAT1-202ENST00000421712 VSIG10L2P0DP72 767 aa12.57□□□□□ -0.4
BRAT1-202ENST00000421712 LUMP51884 338 aaPredicted RBP12.57□□□□□ -0.4
BRAT1-202ENST00000421712 EBI3Q14213 229 aa12.57□□□□□ -0.4
BRAT1-202ENST00000421712 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.57□□□□□ -0.4
BRAT1-202ENST00000421712 OR5AP2Q8NGF4 316 aa12.57□□□□□ -0.4
BRAT1-202ENST00000421712 DIRAS2Q96HU8 199 aa12.57□□□□□ -0.4
BRAT1-202ENST00000421712 ZNF251Q9BRH9 671 aa12.57□□□□□ -0.4
BRAT1-202ENST00000421712 MIXL1Q9H2W2 232 aa12.57□□□□□ -0.4
BRAT1-202ENST00000421712 ZNF702PQ9H963 129 aa12.57□□□□□ -0.4
BRAT1-202ENST00000421712 SCPEP1Q9HB40 452 aa12.57□□□□□ -0.4
BRAT1-202ENST00000421712 OR2W1Q9Y3N9 320 aa12.57□□□□□ -0.4
BRAT1-202ENST00000421712 PMP2P02689 132 aa12.56□□□□□ -0.4
BRAT1-202ENST00000421712 OR5H8P0DN80 308 aa12.56□□□□□ -0.4
BRAT1-202ENST00000421712 FCGR2CP31995 323 aa12.56□□□□□ -0.4
BRAT1-202ENST00000421712 MC5RP33032 325 aa12.56□□□□□ -0.4
BRAT1-202ENST00000421712 VDAC2P45880 294 aaPredicted RBP12.56□□□□□ -0.4
BRAT1-202ENST00000421712 CDK10Q15131 360 aa12.56□□□□□ -0.4
BRAT1-202ENST00000421712 FAM131AQ6UXB0 335 aa12.56□□□□□ -0.4
BRAT1-202ENST00000421712 Q6ZS46 218 aa12.56□□□□□ -0.4
BRAT1-202ENST00000421712 OR5H2Q8NGV7 314 aa12.56□□□□□ -0.4
BRAT1-202ENST00000421712 GPX8Q8TED1 209 aa12.56□□□□□ -0.4
BRAT1-202ENST00000421712 C15orf40Q8WUR7 153 aa12.56□□□□□ -0.4
BRAT1-202ENST00000421712 SNAPC3Q92966 411 aa12.56□□□□□ -0.4
BRAT1-202ENST00000421712 RASL11BQ9BPW5 248 aa12.56□□□□□ -0.4
BRAT1-202ENST00000421712 ZNF747Q9BV97 191 aa12.56□□□□□ -0.4
BRAT1-202ENST00000421712 SLIRPQ9GZT3 109 aaKnown RBP12.56□□□□□ -0.4
BRAT1-202ENST00000421712 RBM38Q9H0Z9 239 aaKnown RBP12.56□□□□□ -0.4
BRAT1-202ENST00000421712 SDHAF2Q9NX18 166 aa12.56□□□□□ -0.4
BRAT1-202ENST00000421712 EHFQ9NZC4 300 aa12.56□□□□□ -0.4
BRAT1-202ENST00000421712 OR5H14A6NHG9 310 aa12.55□□□□□ -0.4
BRAT1-202ENST00000421712 ZNF701M0R085 212 aaPredicted RBP12.55□□□□□ -0.4
BRAT1-202ENST00000421712 SULT1C2O00338 296 aa12.55□□□□□ -0.4
BRAT1-202ENST00000421712 APOA2P02652 100 aa12.55□□□□□ -0.4
BRAT1-202ENST00000421712 HLA-DMAP28067 261 aa12.55□□□□□ -0.4
BRAT1-202ENST00000421712 F2RL1P55085 397 aa12.55□□□□□ -0.4
BRAT1-202ENST00000421712 TAS2R46P59540 309 aa12.55□□□□□ -0.4
BRAT1-202ENST00000421712 C11orf88Q6PI97 169 aa12.55□□□□□ -0.4
BRAT1-202ENST00000421712 C5orf56Q8N8D9 126 aa12.55□□□□□ -0.4
BRAT1-202ENST00000421712 GAB2Q9UQC2 676 aa12.55□□□□□ -0.4
BRAT1-202ENST00000421712 WASHC3Q9Y3C0 194 aa12.55□□□□□ -0.4
BRAT1-202ENST00000421712 H0YJW9 148 aa12.54□□□□□ -0.4
BRAT1-202ENST00000421712 FGF16O43320 207 aa12.54□□□□□ -0.4
BRAT1-202ENST00000421712 PROP1O75360 226 aa12.54□□□□□ -0.4
BRAT1-202ENST00000421712 TUSC2O75896 110 aa12.54□□□□□ -0.4
BRAT1-202ENST00000421712 AMY1AP04745 511 aa12.54□□□□□ -0.4
BRAT1-202ENST00000421712 AMY2AP04746 511 aa12.54□□□□□ -0.4
BRAT1-202ENST00000421712 AADACP22760 399 aa12.54□□□□□ -0.4
BRAT1-202ENST00000421712 RCVRNP35243 200 aa12.54□□□□□ -0.4
BRAT1-202ENST00000421712 RFX2P48378 723 aa12.54□□□□□ -0.4
BRAT1-202ENST00000421712 PROK1P58294 105 aa12.54□□□□□ -0.4
BRAT1-202ENST00000421712 LINC00205P59089 165 aa12.54□□□□□ -0.4
BRAT1-202ENST00000421712 FXYD4P59646 89 aa12.54□□□□□ -0.4
BRAT1-202ENST00000421712 ACTBP60709 375 aa12.54□□□□□ -0.4
BRAT1-202ENST00000421712 SRSF4Q08170 494 aaKnown RBP12.54□□□□□ -0.4
BRAT1-202ENST00000421712 IL18Q14116 193 aa12.54□□□□□ -0.4
BRAT1-202ENST00000421712 MMDQ15546 238 aa12.54□□□□□ -0.4
BRAT1-202ENST00000421712 SHISA2Q6UWI4 295 aa12.54□□□□□ -0.4
BRAT1-202ENST00000421712 Q8N2B8 174 aa12.54□□□□□ -0.4
BRAT1-202ENST00000421712 Q8N6K4 173 aa12.54□□□□□ -0.4
BRAT1-202ENST00000421712 ZNF645Q8N7E2 425 aa12.54□□□□□ -0.4
BRAT1-202ENST00000421712 OR8H1Q8NGG4 311 aa12.54□□□□□ -0.4
BRAT1-202ENST00000421712 SECTM1Q8WVN6 248 aa12.54□□□□□ -0.4
BRAT1-202ENST00000421712 FCAMRQ8WWV6 532 aa12.54□□□□□ -0.4
BRAT1-202ENST00000421712 WFDC12Q8WWY7 111 aa12.54□□□□□ -0.4
BRAT1-202ENST00000421712 ABHD1Q96SE0 405 aa12.54□□□□□ -0.4
BRAT1-202ENST00000421712 NDUFA13Q9P0J0 144 aa12.54□□□□□ -0.4
BRAT1-202ENST00000421712 RBBP9O75884 186 aa12.53□□□□□ -0.4
BRAT1-202ENST00000421712 SLC22A5O76082 557 aa12.53□□□□□ -0.4
BRAT1-202ENST00000421712 TPPPO94811 219 aa12.53□□□□□ -0.4
BRAT1-202ENST00000421712 NAT1P18440 290 aa12.53□□□□□ -0.4
BRAT1-202ENST00000421712 HERV-K104P61576 105 aa12.53□□□□□ -0.4
BRAT1-202ENST00000421712 CBX3Q13185 183 aa12.53□□□□□ -0.4
BRAT1-202ENST00000421712 TMEM95Q3KNT9 176 aa12.53□□□□□ -0.4
BRAT1-202ENST00000421712 KLHDC1Q8N7A1 406 aa12.53□□□□□ -0.4
BRAT1-202ENST00000421712 Q8N9W7 124 aa12.53□□□□□ -0.4
BRAT1-202ENST00000421712 ZNF383Q8NA42 475 aa12.53□□□□□ -0.4
BRAT1-202ENST00000421712 OR5AN1Q8NGI8 311 aa12.53□□□□□ -0.4
BRAT1-202ENST00000421712 OR52I2Q8NH67 350 aa12.53□□□□□ -0.4
BRAT1-202ENST00000421712 DGCR14Q96DF8 476 aaKnown RBP12.53□□□□□ -0.4
BRAT1-202ENST00000421712 RITA1Q96K30 269 aa12.53□□□□□ -0.4
BRAT1-202ENST00000421712 SLC35D1Q9NTN3 355 aa12.53□□□□□ -0.4
BRAT1-202ENST00000421712 KIAA1456Q9P272 454 aa12.53□□□□□ -0.4
BRAT1-202ENST00000421712 ANAPC10Q9UM13 185 aa12.53□□□□□ -0.4
BRAT1-202ENST00000421712 IGKV1D-13A0A0B4J2D9 117 aa12.52□□□□□ -0.41
BRAT1-202ENST00000421712 DPPA5A6NC42 116 aa12.52□□□□□ -0.41
BRAT1-202ENST00000421712 PPYP01298 95 aa12.52□□□□□ -0.41
BRAT1-202ENST00000421712 IGKV1-13P0DP09 117 aa12.52□□□□□ -0.41
BRAT1-202ENST00000421712 CNTFRP26992 372 aa12.52□□□□□ -0.41
BRAT1-202ENST00000421712 S100A5P33763 92 aa12.52□□□□□ -0.41
BRAT1-202ENST00000421712 HRH1P35367 487 aa12.52□□□□□ -0.41
BRAT1-202ENST00000421712 THBS3P49746 956 aa12.52□□□□□ -0.41
BRAT1-202ENST00000421712 TSPAN5P62079 268 aa12.52□□□□□ -0.41
BRAT1-202ENST00000421712 RPS16P62249 146 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms