RNA–Protein interactions for RNA: ENST00000419472.1

VPS13A-207, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 1 (best)

Gene VPS13A, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-207ENST00000419472 WDR31Q8NA23 367 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 SEC22AQ96IW7 307 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 C9orf85Q96MD7 179 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 TAS2R13Q9NYV9 303 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 IL17CQ9P0M4 197 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 TRAV8-7A0A075B6U6 113 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 A0A0G2JRQ6 117 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 GGT3PA6NGU5 568 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 RPL37AP8A6NKH3 93 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 ENTPD6O75354 484 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 ZNF432O94892 652 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 UBL3O95164 117 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 EFNA3P52797 238 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 SLC35B1P78383 322 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 TAL2Q16559 108 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 IZUMO4Q1ZYL8 232 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 C17orf58Q2M2W7 97 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 COL5A1-AS1Q5SY13 56 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 ACOT7LQ6ZUV0 252 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 SLC30A8Q8IWU4 369 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 DCAF4L2Q8NA75 395 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 OR2M7Q8NG81 312 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 OR4F15Q8NGB8 312 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 OR5AR1Q8NGP9 310 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 SMIM12Q96EX1 92 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 ZFP3Q96NJ6 502 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 IP6K3Q96PC2 410 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 STACQ99469 402 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 SRMSQ9H3Y6 488 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 HRASLSQ9HDD0 168 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 Q9UF83 564 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 SMPXQ9UHP9 88 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 TNFSF18Q9UNG2 199 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 G3V3Y1 287 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 M0R129 80 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 MRPS12O15235 138 aaKnown RBP4.02□□□□□ -1.77
VPS13A-207ENST00000419472 SLC25A14O95258 325 aaPredicted RBP4.02□□□□□ -1.77
VPS13A-207ENST00000419472 ZNF682O95780 498 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 OR5AC1P0C628 307 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 TDGF1P13385 188 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 RPS10P46783 165 aaKnown RBP4.02□□□□□ -1.77
VPS13A-207ENST00000419472 SULT1A1P50225 295 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 SSR4P51571 173 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 OR10A3P58181 314 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 ACVR1Q04771 509 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 DPTQ07507 201 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 ZNF616Q08AN1 781 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 ABRAXAS2Q15018 415 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 PTGES3Q15185 160 aaKnown RBP4.02□□□□□ -1.77
VPS13A-207ENST00000419472 ZNF726P1Q15940 193 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 ACTL10Q5JWF8 245 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 HBMQ6B0K9 141 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 SLC35E4Q6ICL7 350 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 CLEC18BQ6UXF7 455 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 SLC36A1Q7Z2H8 476 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 S100A7AQ86SG5 101 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 LINC01551Q86U37 167 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 SLC30A7Q8NEW0 376 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 OR2A12Q8NGT7 310 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 OR10R2Q8NGX6 335 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 NTN5Q8WTR8 489 aaPredicted RBP4.02□□□□□ -1.77
VPS13A-207ENST00000419472 ZNF471Q9BX82 626 aaPredicted RBP4.02□□□□□ -1.77
VPS13A-207ENST00000419472 PLA2G2FQ9BZM2 168 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 ZNF223Q9UK11 482 aaPredicted RBP4.02□□□□□ -1.77
VPS13A-207ENST00000419472 ASF1AQ9Y294 204 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 HDGFL3Q9Y3E1 203 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 FANCMQ8IYD8 2048 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 C9JQL5 133 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 CD8AP01732 235 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 HILS1P60008 231 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 RPS20P60866 119 aaKnown RBP4.02□□□□□ -1.77
VPS13A-207ENST00000419472 RUNX3Q13761 415 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 GUK1Q16774 197 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 TMEM241Q24JQ0 296 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 TTLL9Q3SXZ7 439 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 PDZD11Q5EBL8 140 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 FHL5Q5TD97 284 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 GLT8D1Q68CQ7 371 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 C22orf39Q6P5X5 142 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 C9orf40Q8IXQ3 194 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 OR10G2Q8NGC3 310 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 OR4K5Q8NGD3 323 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 FLVCR1-AS1Q8TAF5 88 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 NEIL3Q8TAT5 605 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 CD200R1Q8TD46 325 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 GHSRQ92847 366 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 PHB2Q99623 299 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 NIPSNAP1Q9BPW8 284 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 MICU1Q9BPX6 476 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 OR2J1Q9GZK6 312 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 RERGLQ9H628 205 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 WDR54Q9H977 334 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 WIF1Q9Y5W5 379 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 E7EQ34 232 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 K7ENP7 123 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 TNFRSF11BO00300 401 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 CYB5BO43169 146 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 WISP3O95389 354 aaPredicted RBP4.02□□□□□ -1.77
VPS13A-207ENST00000419472 RAB36O95755 333 aa4.02□□□□□ -1.77
VPS13A-207ENST00000419472 TBX6O95947 436 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms