RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 MOSP00540 346 aa14.83□□□□□ -0.04
PTCD3-204ENST00000418628 HES1Q14469 280 aa14.83□□□□□ -0.04
PTCD3-204ENST00000418628 LAX1Q8IWV1 398 aa14.83□□□□□ -0.04
PTCD3-204ENST00000418628 OR2T6Q8NHC8 308 aa14.83□□□□□ -0.04
PTCD3-204ENST00000418628 RBMXL1Q96E39 390 aaKnown RBP14.83□□□□□ -0.04
PTCD3-204ENST00000418628 PRSS22Q9GZN4 317 aa14.83□□□□□ -0.04
PTCD3-204ENST00000418628 OR2D2Q9H210 308 aa14.83□□□□□ -0.04
PTCD3-204ENST00000418628 SCPEP1Q9HB40 452 aa14.83□□□□□ -0.04
PTCD3-204ENST00000418628 H0YJW9 148 aa14.82□□□□□ -0.04
PTCD3-204ENST00000418628 CTDSP2O14595 271 aa14.82□□□□□ -0.04
PTCD3-204ENST00000418628 OR8U9P0C7N5 309 aa14.82□□□□□ -0.04
PTCD3-204ENST00000418628 PRSS3P35030 304 aa14.82□□□□□ -0.04
PTCD3-204ENST00000418628 GPR12P47775 334 aa14.82□□□□□ -0.04
PTCD3-204ENST00000418628 FAM71E2Q8N5Q1 922 aa14.82□□□□□ -0.04
PTCD3-204ENST00000418628 C3orf56Q8N813 242 aa14.82□□□□□ -0.04
PTCD3-204ENST00000418628 OR8H1Q8NGG4 311 aa14.82□□□□□ -0.04
PTCD3-204ENST00000418628 OR8U1Q8NH10 309 aa14.82□□□□□ -0.04
PTCD3-204ENST00000418628 CITED1Q99966 193 aa14.82□□□□□ -0.04
PTCD3-204ENST00000418628 WNT10AQ9GZT5 417 aa14.82□□□□□ -0.04
PTCD3-204ENST00000418628 SDHAF2Q9NX18 166 aa14.82□□□□□ -0.04
PTCD3-204ENST00000418628 RSL24D1Q9UHA3 163 aaKnown RBP14.82□□□□□ -0.04
PTCD3-204ENST00000418628 RNF150Q9ULK6 438 aa14.82□□□□□ -0.04
PTCD3-204ENST00000418628 OR2W1Q9Y3N9 320 aa14.82□□□□□ -0.04
PTCD3-204ENST00000418628 SMIM31A0A1B0GVY4 71 aa14.81□□□□□ -0.04
PTCD3-204ENST00000418628 MEIS3P1A6NDR6 274 aa14.81□□□□□ -0.04
PTCD3-204ENST00000418628 IGLV2-14P01704 120 aa14.81□□□□□ -0.04
PTCD3-204ENST00000418628 NFYAP23511 347 aaPredicted RBP14.81□□□□□ -0.04
PTCD3-204ENST00000418628 Q8N9W7 124 aa14.81□□□□□ -0.04
PTCD3-204ENST00000418628 OR5AP2Q8NGF4 316 aa14.81□□□□□ -0.04
PTCD3-204ENST00000418628 EXTL2Q9UBQ6 330 aa14.81□□□□□ -0.04
PTCD3-204ENST00000418628 ZNF221Q9UK13 617 aa14.81□□□□□ -0.04
PTCD3-204ENST00000418628 VWFP04275 2813 aa14.8□□□□□ -0.04
PTCD3-204ENST00000418628 IGKV1D-13A0A0B4J2D9 117 aa14.8□□□□□ -0.04
PTCD3-204ENST00000418628 FAM25AB3EWG3 89 aa14.8□□□□□ -0.04
PTCD3-204ENST00000418628 FAM25CB3EWG5 89 aa14.8□□□□□ -0.04
PTCD3-204ENST00000418628 FAM25GB3EWG6 89 aa14.8□□□□□ -0.04
PTCD3-204ENST00000418628 SULT1C2O00338 296 aa14.8□□□□□ -0.04
PTCD3-204ENST00000418628 IGKV1-13P0DP09 117 aa14.8□□□□□ -0.04
PTCD3-204ENST00000418628 HNF4GQ14541 408 aa14.8□□□□□ -0.04
PTCD3-204ENST00000418628 TMEM95Q3KNT9 176 aa14.8□□□□□ -0.04
PTCD3-204ENST00000418628 ABCA11PQ4W5N1 156 aa14.8□□□□□ -0.04
PTCD3-204ENST00000418628 ZNF660Q6AZW8 331 aaPredicted RBP14.8□□□□□ -0.04
PTCD3-204ENST00000418628 SHISA2Q6UWI4 295 aa14.8□□□□□ -0.04
PTCD3-204ENST00000418628 FAM131AQ6UXB0 335 aa14.8□□□□□ -0.04
PTCD3-204ENST00000418628 GLDNQ6ZMI3 551 aaPredicted RBP14.8□□□□□ -0.04
PTCD3-204ENST00000418628 ZNF383Q8NA42 475 aa14.8□□□□□ -0.04
PTCD3-204ENST00000418628 PKD1L1Q8TDX9 2849 aa14.8□□□□□ -0.04
PTCD3-204ENST00000418628 NDUFA3O95167 84 aa14.79□□□□□ -0.04
PTCD3-204ENST00000418628 F2RL1P55085 397 aa14.79□□□□□ -0.04
PTCD3-204ENST00000418628 ARPC4P59998 168 aa14.79□□□□□ -0.04
PTCD3-204ENST00000418628 EIF4EBP1Q13541 118 aaPredicted RBP14.79□□□□□ -0.04
PTCD3-204ENST00000418628 CDK10Q15131 360 aa14.79□□□□□ -0.04
PTCD3-204ENST00000418628 OVCH2Q7RTZ1 564 aa14.79□□□□□ -0.04
PTCD3-204ENST00000418628 SNX29P2Q8IUI4 249 aa14.79□□□□□ -0.04
PTCD3-204ENST00000418628 ZNF645Q8N7E2 425 aa14.79□□□□□ -0.04
PTCD3-204ENST00000418628 DDB2Q92466 427 aa14.79□□□□□ -0.04
PTCD3-204ENST00000418628 RITA1Q96K30 269 aa14.79□□□□□ -0.04
PTCD3-204ENST00000418628 ABHD1Q96SE0 405 aa14.79□□□□□ -0.04
PTCD3-204ENST00000418628 IFT46Q9NQC8 304 aa14.79□□□□□ -0.04
PTCD3-204ENST00000418628 LIN7CQ9NUP9 197 aaKnown RBP14.79□□□□□ -0.04
PTCD3-204ENST00000418628 NECAP2Q9NVZ3 263 aa14.79□□□□□ -0.04
PTCD3-204ENST00000418628 WASHC3Q9Y3C0 194 aa14.79□□□□□ -0.04
PTCD3-204ENST00000418628 SH2D7A6NKC9 451 aaPredicted RBP14.78□□□□□ -0.04
PTCD3-204ENST00000418628 OR5H8P0DN80 308 aa14.78□□□□□ -0.04
PTCD3-204ENST00000418628 MC5RP33032 325 aa14.78□□□□□ -0.04
PTCD3-204ENST00000418628 LINC00205P59089 165 aa14.78□□□□□ -0.04
PTCD3-204ENST00000418628 ACTBP60709 375 aa14.78□□□□□ -0.04
PTCD3-204ENST00000418628 SRSF4Q08170 494 aaKnown RBP14.78□□□□□ -0.04
PTCD3-204ENST00000418628 MSMO1Q15800 293 aa14.78□□□□□ -0.04
PTCD3-204ENST00000418628 LYSMD2Q8IV50 215 aa14.78□□□□□ -0.04
PTCD3-204ENST00000418628 KLHDC1Q8N7A1 406 aa14.78□□□□□ -0.04
PTCD3-204ENST00000418628 NPBQ8NG41 125 aa14.78□□□□□ -0.04
PTCD3-204ENST00000418628 MRPS7Q9Y2R9 242 aaKnown RBP14.78□□□□□ -0.04
PTCD3-204ENST00000418628 A3GALT2U3KPV4 340 aa14.78□□□□□ -0.04
PTCD3-204ENST00000418628 CMYA5Q8N3K9 4069 aa14.78□□□□□ -0.04
PTCD3-204ENST00000418628 M0R1X1 148 aa14.77□□□□□ -0.05
PTCD3-204ENST00000418628 RBBP9O75884 186 aa14.77□□□□□ -0.05
PTCD3-204ENST00000418628 IGHG2P01859 326 aa14.77□□□□□ -0.05
PTCD3-204ENST00000418628 FCER2P06734 321 aa14.77□□□□□ -0.05
PTCD3-204ENST00000418628 CNTFRP26992 372 aa14.77□□□□□ -0.05
PTCD3-204ENST00000418628 DUTP33316 252 aaKnown RBP14.77□□□□□ -0.05
PTCD3-204ENST00000418628 RCVRNP35243 200 aa14.77□□□□□ -0.05
PTCD3-204ENST00000418628 VDAC2P45880 294 aaPredicted RBP14.77□□□□□ -0.05
PTCD3-204ENST00000418628 LUMP51884 338 aaPredicted RBP14.77□□□□□ -0.05
PTCD3-204ENST00000418628 TAS2R46P59540 309 aa14.77□□□□□ -0.05
PTCD3-204ENST00000418628 DYRK1AQ13627 763 aa14.77□□□□□ -0.05
PTCD3-204ENST00000418628 PDPNQ86YL7 162 aa14.77□□□□□ -0.05
PTCD3-204ENST00000418628 DRAXINQ8NBI3 349 aaPredicted RBP14.77□□□□□ -0.05
PTCD3-204ENST00000418628 GIMAP1Q8WWP7 306 aa14.77□□□□□ -0.05
PTCD3-204ENST00000418628 LINC00473A8K010 186 aa14.76□□□□□ -0.05
PTCD3-204ENST00000418628 RGS5O15539 181 aa14.76□□□□□ -0.05
PTCD3-204ENST00000418628 SLC22A5O76082 557 aa14.76□□□□□ -0.05
PTCD3-204ENST00000418628 PPYP01298 95 aa14.76□□□□□ -0.05
PTCD3-204ENST00000418628 IGKV1-16P04430 117 aa14.76□□□□□ -0.05
PTCD3-204ENST00000418628 AADACP22760 399 aa14.76□□□□□ -0.05
PTCD3-204ENST00000418628 FCGR2CP31995 323 aa14.76□□□□□ -0.05
PTCD3-204ENST00000418628 FOXB2Q5VYV0 432 aa14.76□□□□□ -0.05
PTCD3-204ENST00000418628 MCFD2Q8NI22 146 aa14.76□□□□□ -0.05
PTCD3-204ENST00000418628 C15orf40Q8WUR7 153 aa14.76□□□□□ -0.05
PTCD3-204ENST00000418628 RNF5Q99942 180 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms