RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 FAM24BQ8N5W8 94 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 GVQW1Q8N7I0 195 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 CCDC71LQ8N9Z2 235 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 HSD17B11Q8NBQ5 300 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 PLPP5Q8NEB5 264 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 SLC26A10Q8NG04 563 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 OR4S1Q8NGB4 309 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 OR1B1Q8NGR6 318 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 OR8U1Q8NH10 309 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 OR51F2Q8NH61 342 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 MFSD8Q8NHS3 518 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 PHOSPHO2Q8TCD6 241 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 RNASEH2CQ8TDP1 164 aaKnown RBP2.1□□□□□ -2.07
VPS41-206ENST00000418457 CD300LFQ8TDQ1 290 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 ST7LQ8TDW4 575 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 TMEM234Q8WY98 164 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 PP6455Q8WZ26 134 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 ST8SIA1Q92185 356 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 FAM3CQ92520 227 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 HAS2Q92819 552 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 S100PBPQ96BU1 408 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 FGGYQ96C11 551 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 RAB39BQ96DA2 213 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 MUCL1Q96DR8 90 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 GNPNAT1Q96EK6 184 aaPredicted RBP2.1□□□□□ -2.07
VPS41-206ENST00000418457 TVP23CQ96ET8 276 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 OR10C1Q96KK4 312 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 IP6K3Q96PC2 410 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 RCHY1Q96PM5 261 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 AMELYQ99218 206 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 S1PR3Q99500 378 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 P2RX4Q99571 388 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 SPIN2AQ99865 258 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 SSX3Q99909 188 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 SPIN2BQ9BPZ2 258 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 NIPSNAP3BQ9BS92 247 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 RTBDNQ9BSG5 229 aaPredicted RBP2.1□□□□□ -2.07
VPS41-206ENST00000418457 RPP25Q9BUL9 199 aaKnown RBP2.1□□□□□ -2.07
VPS41-206ENST00000418457 TM2D1Q9BX74 207 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 TMEM59Q9BXS4 323 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 ULBP3Q9BZM4 244 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 ACTR3CQ9C0K3 210 aaPredicted RBP2.1□□□□□ -2.07
VPS41-206ENST00000418457 RAB33BQ9H082 229 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 SLC25A31Q9H0C2 315 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 LPAR5Q9H1C0 372 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 PRTFDC1Q9NRG1 225 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 MRPL22Q9NWU5 206 aaKnown RBP2.1□□□□□ -2.07
VPS41-206ENST00000418457 FAM206AQ9NX38 181 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 GSKIPQ9P0R6 139 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 DOK5Q9P104 306 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 PITPNC1Q9UKF7 332 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 RARRES3Q9UL19 164 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 NPIPA1Q9UND3 350 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 HDGFL3Q9Y3E1 203 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 RHBDD3Q9Y3P4 386 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 MMACHCQ9Y4U1 282 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 LRP4O75096 1905 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 DNAH12Q6ZR08 3092 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 HCFC1P51610 2035 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 NOTCH3Q9UM47 2321 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 TRBV24-1A0A075B6N3 115 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 TMED7-TICAM2A0A0A6YYA0 188 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 NSG1A0A0A6YYJ2 146 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 TRAV1-1A0A0B4J248 108 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 IGHV3-16A0A0C4DH30 117 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 A0A1B0GWJ7 208 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 A0A1W2PNV4 684 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 A0A1W2PPE3 182 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 RBFOX3A6NFN3 312 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 DHRS7CA6NNS2 312 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 FOXI3A8MTJ6 420 aaPredicted RBP2.09□□□□□ -2.07
VPS41-206ENST00000418457 HIDE1A8MVS5 230 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 C9JQL5 133 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 FTCDNL1E5RQL4 147 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 PPP5D1E7EU14 171 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 PRAMEF26H0Y7S4 382 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 H3BQ15 152 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 H7C1C5 153 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 CLDN34H7C241 214 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 K7N7A8 449 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 M0QZK8 103 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 PLPP3O14495 311 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 AGPAT2O15120 278 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 HCRTR1O43613 425 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 NME2P1O60361 137 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 GGCTO75223 188 aaKnown RBP2.09□□□□□ -2.07
VPS41-206ENST00000418457 PITX3O75364 302 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 CRTAPO75718 401 aaPredicted RBP2.09□□□□□ -2.07
VPS41-206ENST00000418457 NUDT14O95848 222 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 CYB5R3P00387 301 aaPredicted RBP2.09□□□□□ -2.07
VPS41-206ENST00000418457 IGHG1P01857 330 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 TTRP02766 147 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 ARG1P05089 322 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 KLK3P07288 261 aaPredicted RBP2.09□□□□□ -2.07
VPS41-206ENST00000418457 HEXBP07686 556 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 HCKP08631 526 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 GIMD1P0DJR0 217 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 OR5H8P0DN80 308 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 B4GALT1P15291 398 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 CTLA4P16410 223 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms