RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 HSD17B10Q99714 261 aaKnown RBP17.27■□□□□ 0.35
TPM1-208ENST00000404484 GAB2Q9UQC2 676 aa17.27■□□□□ 0.35
TPM1-208ENST00000404484 F5H0A9 414 aaPredicted RBP17.26■□□□□ 0.35
TPM1-208ENST00000404484 G3V3Q6 166 aa17.26■□□□□ 0.35
TPM1-208ENST00000404484 CD99P14209 185 aa17.26■□□□□ 0.35
TPM1-208ENST00000404484 C8orf46Q8TAG6 207 aa17.26■□□□□ 0.35
TPM1-208ENST00000404484 RBPMSQ93062 196 aaKnown RBP17.26■□□□□ 0.35
TPM1-208ENST00000404484 BARX1Q9HBU1 254 aaPredicted RBP17.26■□□□□ 0.35
TPM1-208ENST00000404484 FAM212BQ9NTI7 297 aaPredicted RBP17.26■□□□□ 0.35
TPM1-208ENST00000404484 SDHAF2Q9NX18 166 aa17.26■□□□□ 0.35
TPM1-208ENST00000404484 RBP4P02753 201 aa17.25■□□□□ 0.35
TPM1-208ENST00000404484 RPA2P15927 270 aa17.25■□□□□ 0.35
TPM1-208ENST00000404484 CCL3L1P16619 93 aa17.25■□□□□ 0.35
TPM1-208ENST00000404484 PDLIM4P50479 330 aa17.25■□□□□ 0.35
TPM1-208ENST00000404484 GNB2P62879 340 aa17.25■□□□□ 0.35
TPM1-208ENST00000404484 DRAXINQ8NBI3 349 aaPredicted RBP17.25■□□□□ 0.35
TPM1-208ENST00000404484 ABHD14BQ96IU4 210 aa17.25■□□□□ 0.35
TPM1-208ENST00000404484 GPHA2Q96T91 129 aa17.25■□□□□ 0.35
TPM1-208ENST00000404484 SPIN2AQ99865 258 aa17.25■□□□□ 0.35
TPM1-208ENST00000404484 SPIN2BQ9BPZ2 258 aa17.25■□□□□ 0.35
TPM1-208ENST00000404484 IFI27L2Q9H2X8 130 aa17.25■□□□□ 0.35
TPM1-208ENST00000404484 IGHV4-39P01824 125 aa17.24■□□□□ 0.35
TPM1-208ENST00000404484 DLX6P56179 175 aa17.24■□□□□ 0.35
TPM1-208ENST00000404484 EIF4EBP1Q13541 118 aaPredicted RBP17.24■□□□□ 0.35
TPM1-208ENST00000404484 IAH1Q2TAA2 248 aaPredicted RBP17.24■□□□□ 0.35
TPM1-208ENST00000404484 LYZL2Q7Z4W2 148 aa17.24■□□□□ 0.35
TPM1-208ENST00000404484 SELENOHQ8IZQ5 122 aaKnown RBP17.24■□□□□ 0.35
TPM1-208ENST00000404484 SLC35G3Q8N808 338 aa17.24■□□□□ 0.35
TPM1-208ENST00000404484 ZNF439Q8NDP4 499 aa17.24■□□□□ 0.35
TPM1-208ENST00000404484 LHFPL5Q8TAF8 219 aa17.24■□□□□ 0.35
TPM1-208ENST00000404484 PPP1R1CQ8WVI7 109 aa17.24■□□□□ 0.35
TPM1-208ENST00000404484 WDR89Q96FK6 387 aaPredicted RBP17.24■□□□□ 0.35
TPM1-208ENST00000404484 Q96MF0 132 aa17.24■□□□□ 0.35
TPM1-208ENST00000404484 hCG_1809904A0A1W2PP81 198 aa17.23■□□□□ 0.35
TPM1-208ENST00000404484 A0A1W2PPE2 198 aa17.23■□□□□ 0.35
TPM1-208ENST00000404484 A0A1W2PR64 198 aa17.23■□□□□ 0.35
TPM1-208ENST00000404484 A0A1W2PRV1 198 aa17.23■□□□□ 0.35
TPM1-208ENST00000404484 RAB29O14966 203 aa17.23■□□□□ 0.35
TPM1-208ENST00000404484 ZNF16P17020 682 aaPredicted RBP17.23■□□□□ 0.35
TPM1-208ENST00000404484 ESCO2Q56NI9 601 aa17.23■□□□□ 0.35
TPM1-208ENST00000404484 CT45A1Q5HYN5 189 aa17.23■□□□□ 0.35
TPM1-208ENST00000404484 C8orf31Q8N9H6 132 aa17.23■□□□□ 0.35
TPM1-208ENST00000404484 OR11H4Q8NGC9 324 aa17.23■□□□□ 0.35
TPM1-208ENST00000404484 CT45A3Q8NHU0 189 aa17.23■□□□□ 0.35
TPM1-208ENST00000404484 OR10C1Q96KK4 312 aa17.23■□□□□ 0.35
TPM1-208ENST00000404484 HMSDA8MTL9 139 aa17.23■□□□□ 0.35
TPM1-208ENST00000404484 PET100P0DJ07 73 aa17.23■□□□□ 0.35
TPM1-208ENST00000404484 VDAC1P21796 283 aa17.23■□□□□ 0.35
TPM1-208ENST00000404484 PSMB6P28072 239 aa17.23■□□□□ 0.35
TPM1-208ENST00000404484 Q5BKY6 102 aa17.23■□□□□ 0.35
TPM1-208ENST00000404484 SLC25A48Q6ZT89 311 aaKnown RBP17.23■□□□□ 0.35
TPM1-208ENST00000404484 TCTEX1D2Q8WW35 142 aa17.23■□□□□ 0.35
TPM1-208ENST00000404484 SSBP3Q9BWW4 388 aaPredicted RBP17.23■□□□□ 0.35
TPM1-208ENST00000404484 CSPG4Q6UVK1 2322 aa17.22■□□□□ 0.35
TPM1-208ENST00000404484 PPIAL4CA0A0B4J2A2 164 aa17.22■□□□□ 0.35
TPM1-208ENST00000404484 C17orf98A8MV24 154 aa17.22■□□□□ 0.35
TPM1-208ENST00000404484 MMP23AO75900 390 aa17.22■□□□□ 0.35
TPM1-208ENST00000404484 ATG12O94817 140 aa17.22■□□□□ 0.35
TPM1-208ENST00000404484 PPIAL4GP0DN37 164 aa17.22■□□□□ 0.35
TPM1-208ENST00000404484 ZNF134P52741 427 aa17.22■□□□□ 0.35
TPM1-208ENST00000404484 THAP6Q8TBB0 222 aa17.22■□□□□ 0.35
TPM1-208ENST00000404484 CD300LFQ8TDQ1 290 aa17.22■□□□□ 0.35
TPM1-208ENST00000404484 C5orf30Q96GV9 206 aa17.22■□□□□ 0.35
TPM1-208ENST00000404484 ZFP57Q9NU63 452 aa17.22■□□□□ 0.35
TPM1-208ENST00000404484 SESN1Q9Y6P5 492 aa17.22■□□□□ 0.35
TPM1-208ENST00000404484 DOCK11Q5JSL3 2073 aa17.21■□□□□ 0.35
TPM1-208ENST00000404484 A0A087X0M5 115 aa17.21■□□□□ 0.35
TPM1-208ENST00000404484 A0A1B0GX30 115 aa17.21■□□□□ 0.35
TPM1-208ENST00000404484 MPTX1A8MV57 137 aa17.21■□□□□ 0.35
TPM1-208ENST00000404484 SLC31A2O15432 143 aa17.21■□□□□ 0.35
TPM1-208ENST00000404484 LIPFP07098 398 aa17.21■□□□□ 0.35
TPM1-208ENST00000404484 SLC25A4P12235 298 aa17.21■□□□□ 0.35
TPM1-208ENST00000404484 C4BPBP20851 252 aa17.21■□□□□ 0.35
TPM1-208ENST00000404484 GNG10P50151 68 aa17.21■□□□□ 0.35
TPM1-208ENST00000404484 C9orf62Q8N4C0 152 aa17.21■□□□□ 0.35
TPM1-208ENST00000404484 ZNF525Q8N782 197 aa17.21■□□□□ 0.35
TPM1-208ENST00000404484 ZBTB8BQ8NAP8 495 aaPredicted RBP17.21■□□□□ 0.35
TPM1-208ENST00000404484 LY6G5BQ8NDX9 201 aa17.21■□□□□ 0.35
TPM1-208ENST00000404484 LEAP2Q969E1 77 aa17.21■□□□□ 0.35
TPM1-208ENST00000404484 ADTRPQ96IZ2 230 aa17.21■□□□□ 0.35
TPM1-208ENST00000404484 GSKIPQ9P0R6 139 aa17.21■□□□□ 0.35
TPM1-208ENST00000404484 YLPM1P49750 1951 aaKnown RBP17.2■□□□□ 0.34
TPM1-208ENST00000404484 FXYD6-FXYD2A0A087WZ82 144 aa17.2■□□□□ 0.34
TPM1-208ENST00000404484 TRAV14DV4A0A0A6YYC5 116 aa17.2■□□□□ 0.34
TPM1-208ENST00000404484 M0R1X1 148 aa17.2■□□□□ 0.34
TPM1-208ENST00000404484 NDUFS8O00217 210 aa17.2■□□□□ 0.34
TPM1-208ENST00000404484 IGHV3-7P01780 117 aa17.2■□□□□ 0.34
TPM1-208ENST00000404484 IGHV1-8P0DP01 117 aa17.2■□□□□ 0.34
TPM1-208ENST00000404484 LRRC37A5PQ49AS3 106 aa17.2■□□□□ 0.34
TPM1-208ENST00000404484 THOC7Q6I9Y2 204 aaKnown RBP17.2■□□□□ 0.34
TPM1-208ENST00000404484 C11orf87Q6NUJ2 197 aa17.2■□□□□ 0.34
TPM1-208ENST00000404484 BTNL3Q6UXE8 466 aa17.2■□□□□ 0.34
TPM1-208ENST00000404484 LYG1Q8N1E2 194 aa17.2■□□□□ 0.34
TPM1-208ENST00000404484 CIARTQ8N365 385 aaPredicted RBP17.2■□□□□ 0.34
TPM1-208ENST00000404484 S1PR3Q99500 378 aa17.2■□□□□ 0.34
TPM1-208ENST00000404484 HSPB11Q9Y547 144 aa17.2■□□□□ 0.34
TPM1-208ENST00000404484 MALRD1Q5VYJ5 2156 aa17.2■□□□□ 0.34
TPM1-208ENST00000404484 LOC105371242A0A075B767 164 aa17.19■□□□□ 0.34
TPM1-208ENST00000404484 MPC2O95563 127 aa17.19■□□□□ 0.34
TPM1-208ENST00000404484 DUTP33316 252 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms