RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 TENM4Q6N022 2769 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 A0A0G2JMM0 328 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 A0A1W2PPB8 328 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 MEGF11A6BM72 1044 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 KIR3DP1A8MWS1 328 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 C2CD4DB7Z1M9 353 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 EML2O95834 649 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 CTSBP07858 339 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 MMP7P09237 267 aaPredicted RBP5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 VSIG10L2P0DP72 767 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 PRTN3P24158 256 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 MEF2BQ02080 365 aaPredicted RBP5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 LINC01590Q5TEZ4 76 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 UNQ5815/PRO19632Q6UWF5 114 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 IL34Q6ZMJ4 242 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 NEGR1Q7Z3B1 354 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 POC1AQ8NBT0 407 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 ZNF563Q8TA94 476 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 FAM3DQ96BQ1 224 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 DCBLD2Q96PD2 775 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 RASL10BQ96S79 203 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 GP6Q9HCN6 339 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 VAX2Q9UIW0 290 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 PILRAQ9UKJ1 303 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 SPTBN4Q9H254 2564 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 MAP1BP46821 2468 aaKnown RBP5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 F5P12259 2224 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 BORCS7-ASMTA0A0B4J1R7 106 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 OR4C45A6NMZ5 311 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 PGA3P0DJD8 388 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 ADAM8P78325 824 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 FHL1Q13642 323 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 KCTD18Q6PI47 426 aaPredicted RBP5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 ADAMTSL5Q6ZMM2 481 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 ZNF627Q7L945 461 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 FAM90A1Q86YD7 464 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 TSACCQ96A04 125 aaPredicted RBP5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 C16orf92Q96LL3 132 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 EXOSC3Q9NQT5 275 aaKnown RBP5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 PRTFDC1Q9NRG1 225 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 METRNQ9UJH8 293 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 NOP16Q9Y3C1 178 aaKnown RBP5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 H7BYZ3 331 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 MPPED1O15442 326 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 AMY2AP04746 511 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 THBDP07204 575 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 FTH1P19P0C7X4 201 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 PVRP15151 417 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 AMY2BP19961 511 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 ATP6V0CP27449 155 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 CD34P28906 385 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 CDKN2AP42771 156 aaKnown RBP5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 RPS4XP62701 263 aaKnown RBP5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 TAL2Q16559 108 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 GFI1BQ5VTD9 330 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 MOB1BQ7L9L4 216 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 FAM24BQ8N5W8 94 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 TMEM52Q8NDY8 209 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 OR2G3Q8NGZ4 309 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 SPANXB1Q9NS25 103 aaPredicted RBP5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 A0A096LPE4 126 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 TRBV5-7A0A0A0MS05 114 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 A0A1W2PPZ6 126 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 SLC17A2O00624 439 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 AGPAT2O15120 278 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 ZG16O60844 167 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 CELA3BP08861 270 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 TMEM50BP56557 158 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 H2BFSP57053 126 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 NNATQ16517 81 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 ZNF74Q16587 644 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 ZNF684Q5T5D7 378 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 SLC18B1Q6NT16 456 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 PRSS41Q7RTY9 318 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 CDC20BQ86Y33 519 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 OR4F5Q8NH21 305 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 TSLPQ969D9 159 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 TSPAN32Q96QS1 320 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 GPR35Q9HC97 309 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 ATG2BQ96BY7 2078 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 COL27A1Q8IZC6 1860 aaPredicted RBP5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 PCDH15Q96QU1 1955 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 TRAV36DV7A0A075B6V5 113 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 RNF222A6NCQ9 220 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 ZNF736B4DX44 427 aaPredicted RBP5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 ZNF217O75362 1048 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 CD3DP04234 171 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 TMEM225BP0DP42 221 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 SLC6A9P48067 706 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 ZNF121P58317 390 aaPredicted RBP5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 PPP1R1AQ13522 171 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 ZNF787Q6DD87 383 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 TBC1D26Q86UD7 250 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 PNKDQ8N490 385 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 TMEM229BQ8NBD8 167 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 ZPLD1Q8TCW7 415 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 TMEM18Q96B42 140 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 SARAFQ96BY9 339 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 C4orf45Q96LM5 186 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms