RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 OR5AL1P0C617 328 aa13.44□□□□□ -0.26
GNE-202ENST00000396594 C10orf111Q8N326 155 aa13.44□□□□□ -0.26
GNE-202ENST00000396594 APCDD1LQ8NCL9 501 aa13.44□□□□□ -0.26
GNE-202ENST00000396594 QTRT1Q9BXR0 403 aaKnown RBP13.44□□□□□ -0.26
GNE-202ENST00000396594 LOC101059948A0A1B0GTJ6 334 aa13.43□□□□□ -0.26
GNE-202ENST00000396594 PGLYRP1O75594 196 aaPredicted RBP13.43□□□□□ -0.26
GNE-202ENST00000396594 LOXL3P58215 753 aa13.43□□□□□ -0.26
GNE-202ENST00000396594 CCL13Q99616 98 aa13.43□□□□□ -0.26
GNE-202ENST00000396594 PPP1R17O96001 155 aa13.43□□□□□ -0.26
GNE-202ENST00000396594 UBALD1Q8TB05 177 aa13.43□□□□□ -0.26
GNE-202ENST00000396594 CENPVL1A0A0U1RR11 272 aa13.43□□□□□ -0.26
GNE-202ENST00000396594 hCG_38984A0A1B0GV85 526 aa13.43□□□□□ -0.26
GNE-202ENST00000396594 MELTFP08582 738 aa13.43□□□□□ -0.26
GNE-202ENST00000396594 Q6ZN92 141 aa13.43□□□□□ -0.26
GNE-202ENST00000396594 PARD6AQ9NPB6 346 aa13.43□□□□□ -0.26
GNE-202ENST00000396594 KCNK7Q9Y2U2 307 aa13.43□□□□□ -0.26
GNE-202ENST00000396594 PXMP4Q9Y6I8 212 aa13.43□□□□□ -0.26
GNE-202ENST00000396594 ATP6V0CP27449 155 aa13.43□□□□□ -0.26
GNE-202ENST00000396594 SRSF7Q16629 238 aaKnown RBP eCLIP13.43□□□□□ -0.26
GNE-202ENST00000396594 Q1RN00 199 aa13.43□□□□□ -0.26
GNE-202ENST00000396594 WDFY1Q8IWB7 410 aa13.43□□□□□ -0.26
GNE-202ENST00000396594 MYOZ3Q8TDC0 251 aa13.43□□□□□ -0.26
GNE-202ENST00000396594 PLPPR2Q96GM1 343 aa13.43□□□□□ -0.26
GNE-202ENST00000396594 RABAC1Q9UI14 185 aa13.43□□□□□ -0.26
GNE-202ENST00000396594 NPIPB11E5RHQ5 1161 aa13.42□□□□□ -0.26
GNE-202ENST00000396594 FAM157CP0CG43 387 aa13.42□□□□□ -0.26
GNE-202ENST00000396594 LRP11Q86VZ4 500 aa13.42□□□□□ -0.26
GNE-202ENST00000396594 TMEM252Q8N6L7 170 aa13.42□□□□□ -0.26
GNE-202ENST00000396594 RNASE6Q93091 150 aaKnown RBP13.42□□□□□ -0.26
GNE-202ENST00000396594 GALNT14Q96FL9 552 aa13.42□□□□□ -0.26
GNE-202ENST00000396594 A0A0G2JLM5 398 aa13.42□□□□□ -0.26
GNE-202ENST00000396594 SRXN1Q9BYN0 137 aa13.42□□□□□ -0.26
GNE-202ENST00000396594 LNP1A1A4G5 178 aa13.42□□□□□ -0.26
GNE-202ENST00000396594 IQCF6A8MYZ5 107 aa13.42□□□□□ -0.26
GNE-202ENST00000396594 PLAC9Q5JTB6 97 aa13.42□□□□□ -0.26
GNE-202ENST00000396594 PAPPA-AS1Q5QFB9 102 aa13.42□□□□□ -0.26
GNE-202ENST00000396594 RAX2Q96IS3 184 aa13.42□□□□□ -0.26
GNE-202ENST00000396594 RCC2Q9P258 522 aaKnown RBP13.42□□□□□ -0.26
GNE-202ENST00000396594 RELBQ01201 579 aa13.42□□□□□ -0.26
GNE-202ENST00000396594 TMEM56-RWDD3S4R434 201 aa13.42□□□□□ -0.26
GNE-202ENST00000396594 DICER1Q9UPY3 1922 aaKnown RBP13.42□□□□□ -0.26
GNE-202ENST00000396594 FAM90A9PA6NNJ1 464 aa13.41□□□□□ -0.26
GNE-202ENST00000396594 KBTBD11O94819 623 aa13.41□□□□□ -0.26
GNE-202ENST00000396594 ATP5G2Q06055 141 aa13.41□□□□□ -0.26
GNE-202ENST00000396594 GATAD1Q8WUU5 269 aa13.41□□□□□ -0.26
GNE-202ENST00000396594 TNFRSF14Q92956 283 aa13.41□□□□□ -0.26
GNE-202ENST00000396594 GPR82Q96P67 336 aa13.41□□□□□ -0.26
GNE-202ENST00000396594 KIAA1324LA8MWY0 1029 aaPredicted RBP13.41□□□□□ -0.26
GNE-202ENST00000396594 CYB5R3P00387 301 aaPredicted RBP13.41□□□□□ -0.26
GNE-202ENST00000396594 HLA-DQA1P01909 254 aa13.41□□□□□ -0.26
GNE-202ENST00000396594 SELENOHQ8IZQ5 122 aaKnown RBP13.41□□□□□ -0.26
GNE-202ENST00000396594 RHOVQ96L33 236 aa13.41□□□□□ -0.26
GNE-202ENST00000396594 PTBP3O95758 552 aaKnown RBP13.41□□□□□ -0.26
GNE-202ENST00000396594 SMIM6P0DI80 62 aa13.41□□□□□ -0.26
GNE-202ENST00000396594 ZFP36L1Q07352 338 aaKnown RBP13.41□□□□□ -0.26
GNE-202ENST00000396594 OR11H7Q8NGC8 314 aa13.41□□□□□ -0.26
GNE-202ENST00000396594 MEGF10Q96KG7 1140 aa13.41□□□□□ -0.26
GNE-202ENST00000396594 CCL19Q99731 98 aa13.41□□□□□ -0.26
GNE-202ENST00000396594 DOK5Q9P104 306 aa13.41□□□□□ -0.26
GNE-202ENST00000396594 KCNE5Q9UJ90 142 aa13.41□□□□□ -0.26
GNE-202ENST00000396594 ELF5Q9UKW6 265 aaPredicted RBP13.41□□□□□ -0.26
GNE-202ENST00000396594 CA7P43166 264 aa13.41□□□□□ -0.26
GNE-202ENST00000396594 GTF2H5Q6ZYL4 71 aa13.41□□□□□ -0.26
GNE-202ENST00000396594 OVCH2Q7RTZ1 564 aa13.41□□□□□ -0.26
GNE-202ENST00000396594 MUC15Q8N387 334 aa13.41□□□□□ -0.26
GNE-202ENST00000396594 PLSCR3Q9NRY6 295 aa13.41□□□□□ -0.26
GNE-202ENST00000396594 ADAD2Q8NCV1 583 aaKnown RBP13.4□□□□□ -0.26
GNE-202ENST00000396594 PCGF1Q9BSM1 259 aa13.4□□□□□ -0.26
GNE-202ENST00000396594 IGHV3OR15-7A0A075B7D8 119 aa13.4□□□□□ -0.26
GNE-202ENST00000396594 OR2J3O76001 311 aa13.4□□□□□ -0.26
GNE-202ENST00000396594 AWAT1Q58HT5 328 aa13.4□□□□□ -0.26
GNE-202ENST00000396594 ATG101Q9BSB4 218 aa13.4□□□□□ -0.26
GNE-202ENST00000396594 A0A1B0GW15 77 aa13.4□□□□□ -0.26
GNE-202ENST00000396594 MESP2Q0VG99 397 aa13.4□□□□□ -0.26
GNE-202ENST00000396594 ECSCRQ19T08 205 aa13.4□□□□□ -0.26
GNE-202ENST00000396594 SAPCD1Q5SSQ6 148 aa13.4□□□□□ -0.26
GNE-202ENST00000396594 TOMM20LQ6UXN7 152 aa13.4□□□□□ -0.26
GNE-202ENST00000396594 OR52M1Q8NGK5 317 aa13.4□□□□□ -0.26
GNE-202ENST00000396594 APCSP02743 223 aa13.4□□□□□ -0.27
GNE-202ENST00000396594 C8orf88P0DMB2 117 aa13.4□□□□□ -0.27
GNE-202ENST00000396594 BET1LQ9NYM9 111 aa13.4□□□□□ -0.27
GNE-202ENST00000396594 PRRC2BQ5JSZ5 2229 aaKnown RBP13.39□□□□□ -0.27
GNE-202ENST00000396594 M0R2Z0 102 aa13.39□□□□□ -0.27
GNE-202ENST00000396594 NTN3O00634 580 aaPredicted RBP13.39□□□□□ -0.27
GNE-202ENST00000396594 LTBRP36941 435 aa13.39□□□□□ -0.27
GNE-202ENST00000396594 EFNB2P52799 333 aa13.39□□□□□ -0.27
GNE-202ENST00000396594 CCL8P80075 99 aa13.39□□□□□ -0.27
GNE-202ENST00000396594 TNFRSF9Q07011 255 aa13.39□□□□□ -0.27
GNE-202ENST00000396594 CXorf66Q5JRM2 361 aaPredicted RBP13.39□□□□□ -0.27
GNE-202ENST00000396594 CDCP2Q5VXM1 449 aa13.39□□□□□ -0.27
GNE-202ENST00000396594 ABHD12Q8N2K0 398 aa13.39□□□□□ -0.27
GNE-202ENST00000396594 COL25A1Q9BXS0 654 aaPredicted RBP13.39□□□□□ -0.27
GNE-202ENST00000396594 TMEM140Q9NV12 185 aa13.39□□□□□ -0.27
GNE-202ENST00000396594 TMEM189A5PLL7 270 aa13.39□□□□□ -0.27
GNE-202ENST00000396594 TMEM8BA6NDV4 472 aa13.39□□□□□ -0.27
GNE-202ENST00000396594 FAM157AC9JC47 383 aa13.39□□□□□ -0.27
GNE-202ENST00000396594 PAGE4O60829 102 aa13.39□□□□□ -0.27
GNE-202ENST00000396594 TAF15Q92804 592 aaKnown RBP eCLIP13.39□□□□□ -0.27
GNE-202ENST00000396594 MARVELD3Q96A59 401 aa13.39□□□□□ -0.27
GNE-202ENST00000396594 RBKSQ9H477 322 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms