RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 GLRXP35754 106 aa14.13□□□□□ -0.15
SCN3B-202ENST00000392770 PAGE4O60829 102 aa14.13□□□□□ -0.15
SCN3B-202ENST00000392770 GFRA1P56159 465 aa14.13□□□□□ -0.15
SCN3B-202ENST00000392770 SLC35E4Q6ICL7 350 aa14.13□□□□□ -0.15
SCN3B-202ENST00000392770 SLC35E3Q7Z769 313 aa14.13□□□□□ -0.15
SCN3B-202ENST00000392770 TCTEX1D1Q8N7M0 179 aa14.13□□□□□ -0.15
SCN3B-202ENST00000392770 IL19Q9UHD0 177 aa14.13□□□□□ -0.15
SCN3B-202ENST00000392770 LURAP1Q96LR2 239 aa14.12□□□□□ -0.15
SCN3B-202ENST00000392770 PLXNA2O75051 1894 aa14.12□□□□□ -0.15
SCN3B-202ENST00000392770 UCP3P55916 312 aa14.12□□□□□ -0.15
SCN3B-202ENST00000392770 SPCS3P61009 180 aa14.12□□□□□ -0.15
SCN3B-202ENST00000392770 CLEC2AQ6UVW9 174 aa14.12□□□□□ -0.15
SCN3B-202ENST00000392770 NIT2Q9NQR4 276 aa14.12□□□□□ -0.15
SCN3B-202ENST00000392770 CXorf1O96002 111 aa14.12□□□□□ -0.15
SCN3B-202ENST00000392770 RAB5AP20339 215 aa14.12□□□□□ -0.15
SCN3B-202ENST00000392770 PERPQ96FX8 193 aa14.12□□□□□ -0.15
SCN3B-202ENST00000392770 GAR1Q9NY12 217 aaKnown RBP14.12□□□□□ -0.15
SCN3B-202ENST00000392770 METTL1Q9UBP6 276 aaKnown RBP14.12□□□□□ -0.15
SCN3B-202ENST00000392770 GGNQ86UU5 652 aa14.12□□□□□ -0.15
SCN3B-202ENST00000392770 B9A039 149 aa14.11□□□□□ -0.15
SCN3B-202ENST00000392770 S1PR2O95136 353 aa14.11□□□□□ -0.15
SCN3B-202ENST00000392770 ZNF250P15622 560 aa14.11□□□□□ -0.15
SCN3B-202ENST00000392770 MC5RP33032 325 aa14.11□□□□□ -0.15
SCN3B-202ENST00000392770 BSPH1Q075Z2 132 aa14.11□□□□□ -0.15
SCN3B-202ENST00000392770 MUC15Q8N387 334 aa14.11□□□□□ -0.15
SCN3B-202ENST00000392770 OR11H4Q8NGC9 324 aa14.11□□□□□ -0.15
SCN3B-202ENST00000392770 LYRM2Q9NU23 88 aaPredicted RBP14.11□□□□□ -0.15
SCN3B-202ENST00000392770 SPTBP11277 2137 aa14.11□□□□□ -0.15
SCN3B-202ENST00000392770 CTXND1A0A1B0GTU2 59 aa14.11□□□□□ -0.15
SCN3B-202ENST00000392770 ZNRF1Q8ND25 227 aa14.11□□□□□ -0.15
SCN3B-202ENST00000392770 CEP290O15078 2479 aa14.11□□□□□ -0.15
SCN3B-202ENST00000392770 PQLC2LA1A4F0 135 aa14.11□□□□□ -0.15
SCN3B-202ENST00000392770 TMEM140Q9NV12 185 aa14.11□□□□□ -0.15
SCN3B-202ENST00000392770 TRIOBPQ9H2D6 2365 aa14.11□□□□□ -0.15
SCN3B-202ENST00000392770 PPIAL4CA0A0B4J2A2 164 aa14.11□□□□□ -0.15
SCN3B-202ENST00000392770 ZNF729A6NN14 1252 aaPredicted RBP14.11□□□□□ -0.15
SCN3B-202ENST00000392770 GATCO43716 136 aaKnown RBP14.11□□□□□ -0.15
SCN3B-202ENST00000392770 PPIAL4GP0DN37 164 aa14.11□□□□□ -0.15
SCN3B-202ENST00000392770 APOBEC3AP31941 199 aaPredicted RBP14.11□□□□□ -0.15
SCN3B-202ENST00000392770 PSG7Q13046 419 aa14.11□□□□□ -0.15
SCN3B-202ENST00000392770 MIOXQ9UGB7 285 aa14.11□□□□□ -0.15
SCN3B-202ENST00000392770 RAXQ9Y2V3 346 aa14.11□□□□□ -0.15
SCN3B-202ENST00000392770 MELTFP08582 738 aa14.11□□□□□ -0.15
SCN3B-202ENST00000392770 DLK1P80370 383 aa14.11□□□□□ -0.15
SCN3B-202ENST00000392770 Q5BKY6 102 aa14.11□□□□□ -0.15
SCN3B-202ENST00000392770 ZNF660Q6AZW8 331 aaPredicted RBP14.11□□□□□ -0.15
SCN3B-202ENST00000392770 MRGPRGQ86SM5 289 aa14.11□□□□□ -0.15
SCN3B-202ENST00000392770 TP53RKQ96S44 253 aa14.11□□□□□ -0.15
SCN3B-202ENST00000392770 S100A8P05109 93 aa14.1□□□□□ -0.15
SCN3B-202ENST00000392770 RSG1Q9BU20 258 aa14.1□□□□□ -0.15
SCN3B-202ENST00000392770 IQCF6A8MYZ5 107 aa14.1□□□□□ -0.15
SCN3B-202ENST00000392770 BSXQ3C1V8 233 aa14.1□□□□□ -0.15
SCN3B-202ENST00000392770 BMPERQ8N8U9 685 aa14.1□□□□□ -0.15
SCN3B-202ENST00000392770 ZIC4Q8N9L1 334 aa14.1□□□□□ -0.15
SCN3B-202ENST00000392770 POC1AQ8NBT0 407 aa14.1□□□□□ -0.15
SCN3B-202ENST00000392770 Q8WTZ3 238 aa14.1□□□□□ -0.15
SCN3B-202ENST00000392770 CCL1P22362 96 aa14.1□□□□□ -0.15
SCN3B-202ENST00000392770 PNRC1Q12796 327 aaPredicted RBP14.1□□□□□ -0.15
SCN3B-202ENST00000392770 DRAM1Q8N682 238 aa14.1□□□□□ -0.15
SCN3B-202ENST00000392770 TMEM18Q96B42 140 aa14.1□□□□□ -0.15
SCN3B-202ENST00000392770 SULT1A2P50226 295 aa14.1□□□□□ -0.15
SCN3B-202ENST00000392770 OR10S1Q8NGN2 331 aa14.1□□□□□ -0.15
SCN3B-202ENST00000392770 IL22RA2Q969J5 263 aa14.1□□□□□ -0.15
SCN3B-202ENST00000392770 SLC25A28Q96A46 364 aa14.1□□□□□ -0.15
SCN3B-202ENST00000392770 POM121Q96HA1 1249 aa14.1□□□□□ -0.15
SCN3B-202ENST00000392770 AQP10Q96PS8 301 aa14.1□□□□□ -0.15
SCN3B-202ENST00000392770 FAM162BQ5T6X4 162 aa14.1□□□□□ -0.15
SCN3B-202ENST00000392770 ABHD12Q8N2K0 398 aa14.1□□□□□ -0.15
SCN3B-202ENST00000392770 FAM210BQ96KR6 192 aa14.1□□□□□ -0.15
SCN3B-202ENST00000392770 ZNF586Q9NXT0 402 aa14.1□□□□□ -0.15
SCN3B-202ENST00000392770 PDE6DO43924 150 aa14.09□□□□□ -0.15
SCN3B-202ENST00000392770 MS4A7Q9GZW8 240 aaPredicted RBP14.09□□□□□ -0.15
SCN3B-202ENST00000392770 FGFBP3Q8TAT2 258 aa14.09□□□□□ -0.15
SCN3B-202ENST00000392770 DNASE2O00115 360 aaPredicted RBP14.09□□□□□ -0.15
SCN3B-202ENST00000392770 S100A4P26447 101 aaKnown RBP14.09□□□□□ -0.15
SCN3B-202ENST00000392770 RPL27AP46776 148 aaKnown RBP14.09□□□□□ -0.15
SCN3B-202ENST00000392770 TMEM37Q8WXS4 190 aa14.09□□□□□ -0.15
SCN3B-202ENST00000392770 PIMREGQ9BSJ6 248 aa14.09□□□□□ -0.15
SCN3B-202ENST00000392770 RSRP1Q9BUV0 290 aa14.09□□□□□ -0.15
SCN3B-202ENST00000392770 NPVFQ9HCQ7 196 aa14.09□□□□□ -0.15
SCN3B-202ENST00000392770 IL36RNQ9UBH0 155 aa14.09□□□□□ -0.15
SCN3B-202ENST00000392770 FOXD3Q9UJU5 478 aaPredicted RBP14.09□□□□□ -0.15
SCN3B-202ENST00000392770 GBF1Q92538 1859 aa14.09□□□□□ -0.15
SCN3B-202ENST00000392770 MARCH11A6NNE9 402 aa14.09□□□□□ -0.15
SCN3B-202ENST00000392770 SRSF10O75494 262 aaKnown RBP14.09□□□□□ -0.15
SCN3B-202ENST00000392770 GFI1Q99684 422 aa14.09□□□□□ -0.15
SCN3B-202ENST00000392770 NAT8BQ9UHF3 227 aa14.09□□□□□ -0.15
SCN3B-202ENST00000392770 WNT5AP41221 380 aa14.08□□□□□ -0.15
SCN3B-202ENST00000392770 RPL8P62917 257 aaKnown RBP14.08□□□□□ -0.15
SCN3B-202ENST00000392770 CLEC5AQ9NY25 188 aa14.08□□□□□ -0.15
SCN3B-202ENST00000392770 ZNF319Q9P2F9 582 aa14.08□□□□□ -0.15
SCN3B-202ENST00000392770 PXMP4Q9Y6I8 212 aa14.08□□□□□ -0.15
SCN3B-202ENST00000392770 ZP1P60852 638 aa14.08□□□□□ -0.16
SCN3B-202ENST00000392770 FAM201AQ5SY85 155 aa14.08□□□□□ -0.16
SCN3B-202ENST00000392770 C16orf82Q7Z2V1 217 aa14.08□□□□□ -0.16
SCN3B-202ENST00000392770 VKORC1L1Q8N0U8 176 aa14.08□□□□□ -0.16
SCN3B-202ENST00000392770 ANAPC16Q96DE5 110 aa14.08□□□□□ -0.16
SCN3B-202ENST00000392770 LSM10Q969L4 123 aaKnown RBP14.08□□□□□ -0.16
SCN3B-202ENST00000392770 TNFRSF9Q07011 255 aa14.08□□□□□ -0.16
SCN3B-202ENST00000392770 CEACAM18A8MTB9 384 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms