RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 FAM166AQ6J272 317 aa16.13■□□□□ 0.17
CCDC50-202ENST00000392456 CKLFQ9UBR5 152 aa16.13■□□□□ 0.17
CCDC50-202ENST00000392456 RAD51DO75771 328 aa16.12■□□□□ 0.17
CCDC50-202ENST00000392456 HSPB1P04792 205 aaKnown RBP16.12■□□□□ 0.17
CCDC50-202ENST00000392456 TAS2R31P59538 309 aa16.12■□□□□ 0.17
CCDC50-202ENST00000392456 RHOGP84095 191 aa16.12■□□□□ 0.17
CCDC50-202ENST00000392456 SCGB2A2Q13296 93 aa16.12■□□□□ 0.17
CCDC50-202ENST00000392456 ICAM4Q14773 271 aa16.12■□□□□ 0.17
CCDC50-202ENST00000392456 KALRNO60229 2985 aa16.12■□□□□ 0.17
CCDC50-202ENST00000392456 GLRA1P23415 457 aa16.12■□□□□ 0.17
CCDC50-202ENST00000392456 UCNP55089 124 aa16.12■□□□□ 0.17
CCDC50-202ENST00000392456 GLYATL3Q5SZD4 288 aa16.12■□□□□ 0.17
CCDC50-202ENST00000392456 LYPD6Q86Y78 171 aa16.12■□□□□ 0.17
CCDC50-202ENST00000392456 WFDC8Q8IUA0 241 aa16.12■□□□□ 0.17
CCDC50-202ENST00000392456 TGIF2LYQ8IUE0 185 aa16.12■□□□□ 0.17
CCDC50-202ENST00000392456 FAM213BQ8TBF2 198 aa16.12■□□□□ 0.17
CCDC50-202ENST00000392456 STARD4Q96DR4 205 aa16.12■□□□□ 0.17
CCDC50-202ENST00000392456 SLC45A2Q9UMX9 530 aa16.12■□□□□ 0.17
CCDC50-202ENST00000392456 WSB1Q9Y6I7 421 aa16.12■□□□□ 0.17
CCDC50-202ENST00000392456 MBD3L4A6NDZ8 208 aaPredicted RBP16.11■□□□□ 0.17
CCDC50-202ENST00000392456 MBD3L3A6NE82 208 aaPredicted RBP16.11■□□□□ 0.17
CCDC50-202ENST00000392456 MBD3L5A6NJ08 208 aaPredicted RBP16.11■□□□□ 0.17
CCDC50-202ENST00000392456 SERPINE3A8MV23 424 aa16.11■□□□□ 0.17
CCDC50-202ENST00000392456 ATXN7O15265 892 aaPredicted RBP16.11■□□□□ 0.17
CCDC50-202ENST00000392456 ZNF260Q3ZCT1 412 aa16.11■□□□□ 0.17
CCDC50-202ENST00000392456 DOK3Q7L591 496 aa16.11■□□□□ 0.17
CCDC50-202ENST00000392456 MBD3L2Q8NHZ7 208 aaPredicted RBP16.11■□□□□ 0.17
CCDC50-202ENST00000392456 ERGIC1Q969X5 290 aa16.11■□□□□ 0.17
CCDC50-202ENST00000392456 LOC102724200A0A096LPH7 203 aaPredicted RBP16.11■□□□□ 0.17
CCDC50-202ENST00000392456 C5orf49A4QMS7 147 aa16.11■□□□□ 0.17
CCDC50-202ENST00000392456 FAHP16930 419 aa16.11■□□□□ 0.17
CCDC50-202ENST00000392456 SPSB3Q6PJ21 355 aa16.11■□□□□ 0.17
CCDC50-202ENST00000392456 RHBDD3Q9Y3P4 386 aa16.11■□□□□ 0.17
CCDC50-202ENST00000392456 ACACBO00763 2458 aa16.11■□□□□ 0.17
CCDC50-202ENST00000392456 IGKV1-9A0A0C4DH69 117 aa16.1■□□□□ 0.17
CCDC50-202ENST00000392456 Q6ZT83 130 aa16.1■□□□□ 0.17
CCDC50-202ENST00000392456 OR5D14Q8NGL3 314 aa16.1■□□□□ 0.17
CCDC50-202ENST00000392456 MEGF9Q9H1U4 602 aa16.1■□□□□ 0.17
CCDC50-202ENST00000392456 SH3BGRL3Q9H299 93 aa16.1■□□□□ 0.17
CCDC50-202ENST00000392456 LYRM2Q9NU23 88 aaPredicted RBP16.1■□□□□ 0.17
CCDC50-202ENST00000392456 KIAA1456Q9P272 454 aa16.1■□□□□ 0.17
CCDC50-202ENST00000392456 CGAP01215 116 aa16.1■□□□□ 0.17
CCDC50-202ENST00000392456 ZNF20P17024 532 aa16.1■□□□□ 0.17
CCDC50-202ENST00000392456 ZNF92Q03936 586 aa16.1■□□□□ 0.17
CCDC50-202ENST00000392456 PNRC1Q12796 327 aaPredicted RBP16.1■□□□□ 0.17
CCDC50-202ENST00000392456 PRR27Q6MZM9 219 aa16.1■□□□□ 0.17
CCDC50-202ENST00000392456 MDP1Q86V88 176 aa16.1■□□□□ 0.17
CCDC50-202ENST00000392456 OR5AS1Q8N127 324 aa16.1■□□□□ 0.17
CCDC50-202ENST00000392456 OR4D6Q8NGJ1 314 aa16.1■□□□□ 0.17
CCDC50-202ENST00000392456 TMEM37Q8WXS4 190 aa16.1■□□□□ 0.17
CCDC50-202ENST00000392456 DYRK2Q92630 601 aa16.1■□□□□ 0.17
CCDC50-202ENST00000392456 REEP6Q96HR9 211 aa16.1■□□□□ 0.17
CCDC50-202ENST00000392456 ZNF48Q96MX3 618 aaPredicted RBP16.1■□□□□ 0.17
CCDC50-202ENST00000392456 OR10A2Q9H208 303 aa16.1■□□□□ 0.17
CCDC50-202ENST00000392456 TUBG2Q9NRH3 451 aa16.1■□□□□ 0.17
CCDC50-202ENST00000392456 TMEM106BQ9NUM4 274 aa16.1■□□□□ 0.17
CCDC50-202ENST00000392456 ZNF506Q5JVG8 444 aa16.09■□□□□ 0.17
CCDC50-202ENST00000392456 BHLHA15Q7RTS1 189 aaPredicted RBP16.09■□□□□ 0.17
CCDC50-202ENST00000392456 IMMP2LQ96T52 175 aa16.09■□□□□ 0.17
CCDC50-202ENST00000392456 ZMAT3Q9HA38 289 aaKnown RBP16.09■□□□□ 0.17
CCDC50-202ENST00000392456 PRR13Q9NZ81 148 aa16.09■□□□□ 0.17
CCDC50-202ENST00000392456 DHRS3O75911 302 aa16.09■□□□□ 0.17
CCDC50-202ENST00000392456 SFT2D2O95562 160 aa16.09■□□□□ 0.17
CCDC50-202ENST00000392456 NGFP01138 241 aa16.09■□□□□ 0.17
CCDC50-202ENST00000392456 PFN1P07737 140 aaKnown RBP16.09■□□□□ 0.17
CCDC50-202ENST00000392456 CELA3BP08861 270 aa16.09■□□□□ 0.17
CCDC50-202ENST00000392456 TNFSF4P23510 183 aa16.09■□□□□ 0.17
CCDC50-202ENST00000392456 LGALS7P47929 136 aa16.09■□□□□ 0.17
CCDC50-202ENST00000392456 COMPP49747 757 aaPredicted RBP16.09■□□□□ 0.17
CCDC50-202ENST00000392456 RBPJQ06330 500 aa16.09■□□□□ 0.17
CCDC50-202ENST00000392456 ACOT6Q3I5F7 207 aaPredicted RBP16.09■□□□□ 0.17
CCDC50-202ENST00000392456 TMEM128Q5BJH2 165 aa16.09■□□□□ 0.17
CCDC50-202ENST00000392456 SELENOHQ8IZQ5 122 aaKnown RBP16.09■□□□□ 0.17
CCDC50-202ENST00000392456 OR8G5Q8NG78 346 aa16.09■□□□□ 0.17
CCDC50-202ENST00000392456 FAM57AQ8TBR7 257 aa16.09■□□□□ 0.17
CCDC50-202ENST00000392456 WFDC1Q9HC57 220 aa16.09■□□□□ 0.17
CCDC50-202ENST00000392456 PIGLQ9Y2B2 252 aa16.09■□□□□ 0.17
CCDC50-202ENST00000392456 BORCS7-ASMTA0A0B4J1R7 106 aa16.08■□□□□ 0.17
CCDC50-202ENST00000392456 P2RY1P47900 373 aa16.08■□□□□ 0.17
CCDC50-202ENST00000392456 GABRA6Q16445 453 aa16.08■□□□□ 0.17
CCDC50-202ENST00000392456 ACTL10Q5JWF8 245 aa16.08■□□□□ 0.17
CCDC50-202ENST00000392456 IL22RA2Q969J5 263 aa16.08■□□□□ 0.17
CCDC50-202ENST00000392456 POM121L2Q96KW2 1035 aa16.08■□□□□ 0.17
CCDC50-202ENST00000392456 CTDSP1Q9GZU7 261 aa16.08■□□□□ 0.17
CCDC50-202ENST00000392456 LAMP3Q9UQV4 416 aa16.08■□□□□ 0.17
CCDC50-202ENST00000392456 POLEQ07864 2286 aa16.08■□□□□ 0.16
CCDC50-202ENST00000392456 COLCA1Q6ZS62 124 aa16.08■□□□□ 0.16
CCDC50-202ENST00000392456 TCF24Q7RTU0 167 aa16.08■□□□□ 0.16
CCDC50-202ENST00000392456 DOLPP1Q86YN1 238 aa16.08■□□□□ 0.16
CCDC50-202ENST00000392456 C1QTNF5Q9BXJ0 243 aa16.08■□□□□ 0.16
CCDC50-202ENST00000392456 COL6A6A6NMZ7 2263 aa16.08■□□□□ 0.16
CCDC50-202ENST00000392456 PSG1P11464 419 aa16.07■□□□□ 0.16
CCDC50-202ENST00000392456 CLEC18BQ6UXF7 455 aa16.07■□□□□ 0.16
CCDC50-202ENST00000392456 MARCH1Q8TCQ1 289 aa16.07■□□□□ 0.16
CCDC50-202ENST00000392456 TMEM230Q96A57 120 aa16.07■□□□□ 0.16
CCDC50-202ENST00000392456 CLN8Q9UBY8 286 aa16.07■□□□□ 0.16
CCDC50-202ENST00000392456 FIGNL2A6NMB9 653 aa16.07■□□□□ 0.16
CCDC50-202ENST00000392456 PMPCAQ10713 525 aa16.07■□□□□ 0.16
CCDC50-202ENST00000392456 MPV17LQ2QL34 196 aa16.07■□□□□ 0.16
CCDC50-202ENST00000392456 ANKRD55Q3KP44 614 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms