RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 HTR1DP28221 377 aa14.71□□□□□ -0.05
SGCB-201ENST00000381431 MEF2BQ02080 365 aaPredicted RBP14.71□□□□□ -0.05
SGCB-201ENST00000381431 PRDM14Q9GZV8 571 aa14.71□□□□□ -0.05
SGCB-201ENST00000381431 A0A0G2JMZ2 1700 aa14.71□□□□□ -0.05
SGCB-201ENST00000381431 LRRC37A2A6NM11 1700 aa14.71□□□□□ -0.05
SGCB-201ENST00000381431 SBF1O95248 1867 aa14.71□□□□□ -0.05
SGCB-201ENST00000381431 TAF15Q92804 592 aaKnown RBP eCLIP14.71□□□□□ -0.05
SGCB-201ENST00000381431 LYRM2Q9NU23 88 aaPredicted RBP14.71□□□□□ -0.05
SGCB-201ENST00000381431 IGHV3-72A0A0B4J1Y9 119 aa14.71□□□□□ -0.06
SGCB-201ENST00000381431 OR2J3O76001 311 aa14.71□□□□□ -0.06
SGCB-201ENST00000381431 PAX6P26367 422 aa14.71□□□□□ -0.06
SGCB-201ENST00000381431 LEAP2Q969E1 77 aa14.71□□□□□ -0.06
SGCB-201ENST00000381431 ANAPC16Q96DE5 110 aa14.71□□□□□ -0.06
SGCB-201ENST00000381431 A0A0G2JMM0 328 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 A0A1W2PPB8 328 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 A0A1W2PRS3 328 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 RNF222A6NCQ9 220 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 KIR3DP1A8MWS1 328 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 ZNF383Q8NA42 475 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 SIGLEC12Q96PQ1 595 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 GFI1Q99684 422 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 SNURFLB1AK76 121 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 NPIPB7O75200 414 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 C16orf82Q7Z2V1 217 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 PRSS3P2Q8NHM4 247 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 KLF14Q8TD94 323 aaPredicted RBP14.7□□□□□ -0.06
SGCB-201ENST00000381431 FAM90A10PA6NDY2 464 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 FAM90A18PA6NE21 464 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 FAM90A16PA6NEW6 464 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 FAM90A20PA6NIJ5 464 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 FAM90A8PA6NJQ4 464 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 FAM90A7PA6NKC0 464 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 FAM90A22PA8MWA6 464 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 FAM90A12PA8MX19 464 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 FAM90A5PA8MXJ8 464 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 FAM90A23PA8MXZ1 464 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 HOXD4P09016 255 aaPredicted RBP14.7□□□□□ -0.06
SGCB-201ENST00000381431 FAM90A15PP0C7V4 464 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 FAM90A13PP0C7W8 464 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 FAM90A14PP0C7W9 464 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 FAM90A24PP0C7X0 464 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 GLIPR1P48060 266 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 WDR25Q64LD2 544 aaPredicted RBP14.7□□□□□ -0.06
SGCB-201ENST00000381431 FAM216AQ8WUB2 273 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 POM121Q96HA1 1249 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 WDR61Q9GZS3 305 aaKnown RBP14.7□□□□□ -0.06
SGCB-201ENST00000381431 ZNF319Q9P2F9 582 aa14.7□□□□□ -0.06
SGCB-201ENST00000381431 CDK2AP1O14519 115 aa14.69□□□□□ -0.06
SGCB-201ENST00000381431 IGLV3-19P01714 112 aa14.69□□□□□ -0.06
SGCB-201ENST00000381431 FAM3BP58499 235 aaPredicted RBP14.69□□□□□ -0.06
SGCB-201ENST00000381431 SPCS3P61009 180 aa14.69□□□□□ -0.06
SGCB-201ENST00000381431 DPPA3Q6W0C5 159 aa14.69□□□□□ -0.06
SGCB-201ENST00000381431 OR1L8Q8NGR8 309 aa14.69□□□□□ -0.06
SGCB-201ENST00000381431 RAB1CQ92928 201 aa14.69□□□□□ -0.06
SGCB-201ENST00000381431 SMDT1Q9H4I9 107 aa14.69□□□□□ -0.06
SGCB-201ENST00000381431 ELOA3CA0A087WX78 387 aaPredicted RBP14.69□□□□□ -0.06
SGCB-201ENST00000381431 TRAV14DV4A0A0A6YYC5 116 aa14.69□□□□□ -0.06
SGCB-201ENST00000381431 SRSF10O75494 262 aaKnown RBP14.69□□□□□ -0.06
SGCB-201ENST00000381431 HPRT1P00492 218 aa14.69□□□□□ -0.06
SGCB-201ENST00000381431 NUDT16L1Q9BRJ7 211 aaKnown RBP14.69□□□□□ -0.06
SGCB-201ENST00000381431 RBKSQ9H477 322 aa14.69□□□□□ -0.06
SGCB-201ENST00000381431 NPVFQ9HCQ7 196 aa14.69□□□□□ -0.06
SGCB-201ENST00000381431 RAB29O14966 203 aa14.69□□□□□ -0.06
SGCB-201ENST00000381431 HOXA6P31267 233 aa14.69□□□□□ -0.06
SGCB-201ENST00000381431 NFAM1Q8NET5 270 aaPredicted RBP14.69□□□□□ -0.06
SGCB-201ENST00000381431 PXMP4Q9Y6I8 212 aa14.69□□□□□ -0.06
SGCB-201ENST00000381431 LRRC3CA6NJW4 275 aa14.69□□□□□ -0.06
SGCB-201ENST00000381431 ZG16O60844 167 aa14.69□□□□□ -0.06
SGCB-201ENST00000381431 RANP62826 216 aaKnown RBP14.69□□□□□ -0.06
SGCB-201ENST00000381431 TMEM54Q969K7 222 aa14.69□□□□□ -0.06
SGCB-201ENST00000381431 RAB24Q969Q5 203 aa14.69□□□□□ -0.06
SGCB-201ENST00000381431 MARVELD3Q96A59 401 aa14.69□□□□□ -0.06
SGCB-201ENST00000381431 MS4A5Q9H3V2 200 aa14.69□□□□□ -0.06
SGCB-201ENST00000381431 ODAMA1E959 279 aa14.68□□□□□ -0.06
SGCB-201ENST00000381431 FTH1P19P0C7X4 201 aa14.68□□□□□ -0.06
SGCB-201ENST00000381431 PGA5P0DJD9 388 aa14.68□□□□□ -0.06
SGCB-201ENST00000381431 IGFBP3P17936 291 aaPredicted RBP14.68□□□□□ -0.06
SGCB-201ENST00000381431 FOXJ2Q9P0K8 574 aa14.68□□□□□ -0.06
SGCB-201ENST00000381431 PITPNC1Q9UKF7 332 aa14.68□□□□□ -0.06
SGCB-201ENST00000381431 PDE6DO43924 150 aa14.68□□□□□ -0.06
SGCB-201ENST00000381431 DANCRP0C864 163 aa14.68□□□□□ -0.06
SGCB-201ENST00000381431 P2RY6Q15077 328 aa14.68□□□□□ -0.06
SGCB-201ENST00000381431 HIST3H3Q16695 136 aa14.68□□□□□ -0.06
SGCB-201ENST00000381431 MRPL13Q9BYD1 178 aaKnown RBP14.68□□□□□ -0.06
SGCB-201ENST00000381431 SLC25A10Q9UBX3 287 aaPredicted RBP14.68□□□□□ -0.06
SGCB-201ENST00000381431 PTBP3O95758 552 aaKnown RBP14.68□□□□□ -0.06
SGCB-201ENST00000381431 CXorf1O96002 111 aa14.68□□□□□ -0.06
SGCB-201ENST00000381431 PLAUP00749 431 aa14.68□□□□□ -0.06
SGCB-201ENST00000381431 CFHR1Q03591 330 aa14.68□□□□□ -0.06
SGCB-201ENST00000381431 MIC13Q5XKP0 118 aa14.68□□□□□ -0.06
SGCB-201ENST00000381431 TIMP4Q99727 224 aa14.68□□□□□ -0.06
SGCB-201ENST00000381431 DDA1Q9BW61 102 aa14.68□□□□□ -0.06
SGCB-201ENST00000381431 PKIBQ9C010 78 aa14.68□□□□□ -0.06
SGCB-201ENST00000381431 HEATR1Q9H583 2144 aaKnown RBP14.68□□□□□ -0.06
SGCB-201ENST00000381431 LOC390937A0A1W2PQ73 354 aa14.67□□□□□ -0.06
SGCB-201ENST00000381431 RHBDL1O75783 438 aa14.67□□□□□ -0.06
SGCB-201ENST00000381431 OR10J1P30954 320 aa14.67□□□□□ -0.06
SGCB-201ENST00000381431 OR51B2Q9Y5P1 312 aa14.67□□□□□ -0.06
SGCB-201ENST00000381431 IGKV1-9A0A0C4DH69 117 aa14.67□□□□□ -0.06
SGCB-201ENST00000381431 hCG_38984A0A1B0GV85 526 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms