RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 SERF2P84101 59 aa9.4□□□□□ -0.9
CLCN4-202ENST00000380833 BIVMQ86UB2 503 aa9.4□□□□□ -0.9
CLCN4-202ENST00000380833 PPP1R3EQ9H7J1 279 aa9.4□□□□□ -0.9
CLCN4-202ENST00000380833 SPTY2D1-AS1A0A0U1RR47 76 aa9.4□□□□□ -0.9
CLCN4-202ENST00000380833 UCP1P25874 307 aa9.4□□□□□ -0.9
CLCN4-202ENST00000380833 PSG5Q15238 335 aa9.4□□□□□ -0.9
CLCN4-202ENST00000380833 VAX1Q5SQQ9 334 aa9.4□□□□□ -0.9
CLCN4-202ENST00000380833 ANKRD33Q7Z3H0 272 aa9.4□□□□□ -0.9
CLCN4-202ENST00000380833 OR4P4Q8NGL7 312 aa9.4□□□□□ -0.9
CLCN4-202ENST00000380833 SPAG17Q6Q759 2223 aa9.4□□□□□ -0.9
CLCN4-202ENST00000380833 PLAUP00749 431 aa9.4□□□□□ -0.9
CLCN4-202ENST00000380833 VSIG10L2P0DP72 767 aa9.4□□□□□ -0.9
CLCN4-202ENST00000380833 HTN3P15516 51 aa9.4□□□□□ -0.9
CLCN4-202ENST00000380833 ID4P47928 161 aa9.4□□□□□ -0.9
CLCN4-202ENST00000380833 P2RY6Q15077 328 aa9.4□□□□□ -0.9
CLCN4-202ENST00000380833 PYY3Q5JQD4 70 aa9.4□□□□□ -0.9
CLCN4-202ENST00000380833 IBA57Q5T440 356 aaKnown RBP9.4□□□□□ -0.9
CLCN4-202ENST00000380833 APOBEC3DQ96AK3 386 aaPredicted RBP9.4□□□□□ -0.9
CLCN4-202ENST00000380833 CACNG5Q9UF02 275 aa9.4□□□□□ -0.9
CLCN4-202ENST00000380833 CRYBG1Q9Y4K1 1723 aa9.4□□□□□ -0.9
CLCN4-202ENST00000380833 LMO7DNF2Z398 122 aa9.4□□□□□ -0.9
CLCN4-202ENST00000380833 WNT5AP41221 380 aa9.4□□□□□ -0.9
CLCN4-202ENST00000380833 LOXL3P58215 753 aa9.4□□□□□ -0.9
CLCN4-202ENST00000380833 SLC25A30Q5SVS4 291 aa9.4□□□□□ -0.9
CLCN4-202ENST00000380833 TCF23Q7RTU1 214 aa9.4□□□□□ -0.9
CLCN4-202ENST00000380833 VSTM2AQ8TAG5 236 aa9.4□□□□□ -0.9
CLCN4-202ENST00000380833 PMELP40967 661 aa9.4□□□□□ -0.91
CLCN4-202ENST00000380833 TM4SF20Q53R12 229 aa9.4□□□□□ -0.91
CLCN4-202ENST00000380833 PGLYRP3Q96LB9 341 aa9.4□□□□□ -0.91
CLCN4-202ENST00000380833 AQP10Q96PS8 301 aa9.4□□□□□ -0.91
CLCN4-202ENST00000380833 TRAV8-1A0A0A6YYK1 113 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 GFRA3O60609 400 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 HSD52Q0P140 79 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 OR1L1Q8NH94 360 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 ZNF479Q96JC4 524 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 LRP12Q9Y561 859 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 A8MWP6 167 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 DANCRP0C864 163 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 IFITM1P13164 125 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 AZU1P20160 251 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 EDARADDQ8WWZ3 215 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 IGHV1-69-2A0A0G2JMI3 117 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 PNLIPP16233 465 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 IL11RAQ14626 422 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 OR4D5Q8NGN0 318 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 CSTL1Q9H114 145 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 NHP2Q9NX24 153 aaKnown RBP9.39□□□□□ -0.91
CLCN4-202ENST00000380833 A8MWL6 223 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 FXYD1O00168 92 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 TNFRSF6BO95407 300 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 FUT5Q11128 374 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 ZNF414Q96IQ9 312 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 ATG2BQ96BY7 2078 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 PTPRZ1P23471 2315 aaPredicted RBP9.39□□□□□ -0.91
CLCN4-202ENST00000380833 KCNE1BA0A087WTH5 132 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 A0A087WUJ7 227 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 TMEM8BA6NDV4 472 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 UBE2L6O14933 153 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 ZNF117Q03924 483 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 TMEM155Q4W5P6 130 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 ADAD2Q8NCV1 583 aaKnown RBP9.39□□□□□ -0.91
CLCN4-202ENST00000380833 A0A1W2PPC1 479 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 NDUFB4O95168 129 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 TRACP01848 142 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 PF4P02776 101 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 SSPNQ14714 243 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 REPIN1Q9BWE0 567 aaKnown RBP9.39□□□□□ -0.91
CLCN4-202ENST00000380833 AICDAQ9GZX7 198 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 NRN1Q9NPD7 142 aa9.39□□□□□ -0.91
CLCN4-202ENST00000380833 BRWD1Q9NSI6 2320 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 FUT6P51993 359 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 OR52M1Q8NGK5 317 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 SEBOXQ9HB31 216 aaPredicted RBP9.38□□□□□ -0.91
CLCN4-202ENST00000380833 TNFSF14O43557 240 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 HLA-DQB1P01920 261 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 KIR2DL1P43626 348 aaPredicted RBP9.38□□□□□ -0.91
CLCN4-202ENST00000380833 KIR2DL2P43627 348 aaPredicted RBP9.38□□□□□ -0.91
CLCN4-202ENST00000380833 RPL30P62888 115 aaKnown RBP9.38□□□□□ -0.91
CLCN4-202ENST00000380833 OR4X1Q8NH49 305 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 DNAJC13O75165 2243 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 OR11H12B2RN74 326 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 SYNGR2O43760 224 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 TGFAP01135 160 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 GCSAMLQ5JQS6 135 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 ZNF441Q8N8Z8 693 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 OR11H1Q8NG94 326 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 OR11H2Q8NH07 326 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 ST8SIA1Q92185 356 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 C4orf45Q96LM5 186 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 LINC00470Q9BZP3 86 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 MON2Q7Z3U7 1717 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 IGHV1OR15-9A0A0B4J2B8 117 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 GBGT1Q8N5D6 347 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 TMEM45BQ96B21 275 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 ANXA10Q9UJ72 324 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 AMMECR1Q9Y4X0 333 aaPredicted RBP9.38□□□□□ -0.91
CLCN4-202ENST00000380833 GAGE12JA6NER3 117 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 GAGE7O76087 117 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 GAGE12FP0CL80 117 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 GAGE12GP0CL81 117 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms