RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 MS4A5Q9H3V2 200 aa8.3□□□□□ -1.08
SNX1-202ENST00000380285 COA4Q9NYJ1 87 aa8.3□□□□□ -1.08
SNX1-202ENST00000380285 J3QW42 95 aa8.3□□□□□ -1.08
SNX1-202ENST00000380285 EML2O95834 649 aa8.3□□□□□ -1.08
SNX1-202ENST00000380285 COX5BP10606 129 aa8.3□□□□□ -1.08
SNX1-202ENST00000380285 SELENOHQ8IZQ5 122 aaKnown RBP8.3□□□□□ -1.08
SNX1-202ENST00000380285 OR11H4Q8NGC9 324 aa8.3□□□□□ -1.08
SNX1-202ENST00000380285 GUCD1Q96NT3 240 aa8.3□□□□□ -1.08
SNX1-202ENST00000380285 MRPS16Q9Y3D3 137 aaKnown RBP8.3□□□□□ -1.08
SNX1-202ENST00000380285 PSG9Q00887 426 aa8.3□□□□□ -1.08
SNX1-202ENST00000380285 C19orf48Q6RUI8 117 aa8.3□□□□□ -1.08
SNX1-202ENST00000380285 PLPPR2Q96GM1 343 aa8.3□□□□□ -1.08
SNX1-202ENST00000380285 FOXQ1Q9C009 403 aa8.3□□□□□ -1.08
SNX1-202ENST00000380285 RBKSQ9H477 322 aa8.3□□□□□ -1.08
SNX1-202ENST00000380285 SOX21Q9Y651 276 aaPredicted RBP8.3□□□□□ -1.08
SNX1-202ENST00000380285 CA5BP1Q8WTZ4 195 aa8.3□□□□□ -1.08
SNX1-202ENST00000380285 TRAV30A0A087WSZ9 112 aa8.3□□□□□ -1.08
SNX1-202ENST00000380285 OR4C46A6NHA9 309 aa8.3□□□□□ -1.08
SNX1-202ENST00000380285 CD3EP07766 207 aa8.3□□□□□ -1.08
SNX1-202ENST00000380285 ERVFRD-1P60508 538 aa8.3□□□□□ -1.08
SNX1-202ENST00000380285 ZNF658BQ4V348 819 aaPredicted RBP8.3□□□□□ -1.08
SNX1-202ENST00000380285 WDR25Q64LD2 544 aaPredicted RBP8.3□□□□□ -1.08
SNX1-202ENST00000380285 SLC25A47Q6Q0C1 308 aa8.3□□□□□ -1.08
SNX1-202ENST00000380285 SYT8Q8NBV8 401 aa8.3□□□□□ -1.08
SNX1-202ENST00000380285 TMEM190Q8WZ59 177 aa8.3□□□□□ -1.08
SNX1-202ENST00000380285 TCFL5Q9UL49 500 aa8.3□□□□□ -1.08
SNX1-202ENST00000380285 CABIN1Q9Y6J0 2220 aa8.3□□□□□ -1.08
SNX1-202ENST00000380285 HYAL3O43820 417 aaPredicted RBP8.29□□□□□ -1.08
SNX1-202ENST00000380285 CKS2P33552 79 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 TNFRSF9Q07011 255 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 MGAT2Q10469 447 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 PSME4Q14997 1843 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 C17orf51A8MQB3 221 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 TUSC5Q8IXB3 177 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 WDR31Q8NA23 367 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 ZNF430Q9H8G1 570 aaPredicted RBP8.29□□□□□ -1.08
SNX1-202ENST00000380285 TGIF2-C20orf24A0A0A6YYL0 155 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 IGLV1-36A0A0B4J1U3 117 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 OR1K1Q8NGR3 316 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 TMEM208Q9BTX3 173 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 CCL2P13500 99 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 ZAR1Q86SH2 424 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 PRNTQ86SH4 94 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 A0A1B0GW15 77 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 FBLL1A6NHQ2 334 aaKnown RBP8.29□□□□□ -1.08
SNX1-202ENST00000380285 MT-CO3P00414 261 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 LIPFP07098 398 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 TRGC1P0CF51 173 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 CD40P25942 277 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 NPBWR2P48146 333 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 TSPAN2O60636 221 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 TSPAN7P41732 249 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 EFNB1P98172 346 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 RUNX1Q01196 453 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 TTC32Q5I0X7 151 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 Q96M66 194 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 MYOFQ9NZM1 2061 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 PGLYRP1O75594 196 aaPredicted RBP8.29□□□□□ -1.08
SNX1-202ENST00000380285 MAS1LP35410 378 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 PRDM14Q9GZV8 571 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 FAM206AQ9NX38 181 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 PLA2G3Q9NZ20 509 aa8.29□□□□□ -1.08
SNX1-202ENST00000380285 C8orf88P0DMB2 117 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 SCGB1A1P11684 91 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 HINT1P49773 126 aaPredicted RBP8.28□□□□□ -1.08
SNX1-202ENST00000380285 CITED1Q99966 193 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 ZNF831Q5JPB2 1677 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 ZNF729A6NN14 1252 aaPredicted RBP8.28□□□□□ -1.08
SNX1-202ENST00000380285 PRDX2P32119 198 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 TNFSF10P50591 281 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 F2RL2O00254 374 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 PPP1R17O96001 155 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 TMEM187Q14656 261 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 PAPPA-AS1Q5QFB9 102 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 MMD2Q8IY49 270 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 FAM222BQ8WU58 562 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 MIEN1Q9BRT3 115 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 DNAJC4Q9NNZ3 241 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 HSPB7Q9UBY9 170 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 DOCK11Q5JSL3 2073 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 PATE4P0C8F1 98 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 Q5PR19 223 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 MOGAT3Q86VF5 341 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 OR2I1PQ8NGU4 316 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 PARLQ9H300 379 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 IL36RNQ9UBH0 155 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 SHISA7A6NL88 538 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 H0YL77 283 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 KLK2P20151 261 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 PEBP1P30086 187 aaKnown RBP8.28□□□□□ -1.08
SNX1-202ENST00000380285 PTGDSP41222 190 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 P2RY6Q15077 328 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 DNLZQ5SXM8 178 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 TMEM78Q5T7P6 136 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 GALNT14Q96FL9 552 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 FZR1Q9UM11 496 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 LOC105371267A0A1B0GV96 52 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 NPIPB6E9PJ23 425 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 RECKO95980 971 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 COX7A1P24310 79 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms