RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 RCHY1Q96PM5 261 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 CLEC7AQ9BXN2 247 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 SIT1Q9Y3P8 196 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 TRBV7-9A0A0J9YWB2 115 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 LOC107986453A0A1B0GWG9 222 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 C17orf112F2Z3M2 114 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 H0YJW9 148 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 MLNRO43193 412 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 STATHP02808 62 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 CLEC3BP05452 202 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 PGCP20142 388 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 FUT6P51993 359 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 ARFRP1Q13795 201 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 LYSMD4Q5XG99 296 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 HLA-DQA1Q5Y7H0 255 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 PET117Q6UWS5 81 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 GTF2H5Q6ZYL4 71 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 MARCH3Q86UD3 253 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 BCORP1Q8N888 145 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 SUMF1Q8NBK3 374 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 MMABQ96EY8 250 aaPredicted RBP6.37□□□□□ -1.39
CDKL5-201ENST00000379989 GMPPAQ96IJ6 420 aaPredicted RBP6.37□□□□□ -1.39
CDKL5-201ENST00000379989 KCNS1Q96KK3 526 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 NPFFR1Q9GZQ6 430 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 WDR54Q9H977 334 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 IGKV1D-8A0A087WSZ0 117 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 SIRPB1O00241 398 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 PLPP3O14495 311 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 VENTXO95231 258 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 NRASP01111 189 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 KRASP01116 189 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 BGLAPP02818 100 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 PVRP15151 417 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 IL11RAQ14626 422 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 ASCL4Q6XD76 172 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 LIAT1Q6ZQX7 453 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 HINT2Q9BX68 163 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 NAA60Q9H7X0 242 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 HHLA2Q9UM44 414 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 SCN3AQ9NY46 2000 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 PRRC2BQ5JSZ5 2229 aaKnown RBP6.36□□□□□ -1.39
CDKL5-201ENST00000379989 SAA2-SAA4A0A096LPE2 208 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 GAGE12HA6NDE8 117 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 SSSCA1O60232 199 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 TMEM50AO95807 157 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 MPIG6BO95866 241 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 STAG3L2P0CL84 134 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 ZNF20P17024 532 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 GUCA1AP43080 201 aaPredicted RBP6.36□□□□□ -1.39
CDKL5-201ENST00000379989 C16orf52Q8NHV5 167 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 BLNKQ8WV28 456 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 RNF138Q8WVD3 245 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 RTN4IP1Q8WWV3 396 aaPredicted RBP6.36□□□□□ -1.39
CDKL5-201ENST00000379989 OR5P3Q8WZ94 311 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 ST8SIA1Q92185 356 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 MSI2Q96DH6 328 aaKnown RBP6.36□□□□□ -1.39
CDKL5-201ENST00000379989 JMJD8Q96S16 334 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 FBLN5Q9UBX5 448 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 PSG8Q9UQ74 426 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 TSSC4Q9Y5U2 329 aaPredicted RBP6.36□□□□□ -1.39
CDKL5-201ENST00000379989 A0A0G2JMM0 328 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 TEX48A0A1B0GUV7 120 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 A0A1W2PP11 408 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 A0A1W2PPB8 328 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 KIR3DP1A8MWS1 328 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 ZNF324O75467 553 aaPredicted RBP6.36□□□□□ -1.39
CDKL5-201ENST00000379989 CER1O95813 267 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 IGHMP01871 453 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 REG1AP05451 166 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 CT62P0C5K7 136 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 ZNF17P17021 662 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 PPOXP50336 477 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 TESK1Q15569 626 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 PMS2CLQ68D20 193 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 BRICD5Q6PL45 260 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 FAM58AQ8N1B3 248 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 SLC22A24Q8N4F4 322 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 ZNF441Q8N8Z8 693 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 TMEM52Q8NDY8 209 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 OR10G3Q8NGC4 313 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 LIME1Q9H400 295 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 BANF2Q9H503 90 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 SLC7A10Q9NS82 523 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 TAAR3PQ9P1P4 343 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 FREM3P0C091 2139 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 ATG2BQ96BY7 2078 aa6.36□□□□□ -1.39
CDKL5-201ENST00000379989 TNRC6AQ8NDV7 1962 aaKnown RBP6.36□□□□□ -1.39
CDKL5-201ENST00000379989 C7orf71A4D174 169 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 OR11H12B2RN74 326 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 CCL2P13500 99 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 PLA2G5P39877 138 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 LTC4SQ16873 150 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 CD300EQ496F6 205 aaPredicted RBP6.35□□□□□ -1.39
CDKL5-201ENST00000379989 C12orf54Q6X4T0 127 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 FAM19A2Q8N3H0 131 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 OR11H1Q8NG94 326 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 OR11H2Q8NH07 326 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 PATE1Q8WXA2 126 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 ZNF501Q96CX3 271 aaPredicted RBP6.35□□□□□ -1.39
CDKL5-201ENST00000379989 DECR2Q9NUI1 292 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms