RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 FGFRL1Q8N441 504 aa9.7□□□□□ -0.86
SMAD9-202ENST00000379826 DEFB108BQ8NET1 73 aa9.7□□□□□ -0.86
SMAD9-202ENST00000379826 CTXND1A0A1B0GTU2 59 aa9.7□□□□□ -0.86
SMAD9-202ENST00000379826 ZG16O60844 167 aa9.7□□□□□ -0.86
SMAD9-202ENST00000379826 NDUFB7P17568 137 aa9.7□□□□□ -0.86
SMAD9-202ENST00000379826 ABHD14BQ96IU4 210 aa9.7□□□□□ -0.86
SMAD9-202ENST00000379826 S1PR3Q99500 378 aa9.7□□□□□ -0.86
SMAD9-202ENST00000379826 IL17BQ9UHF5 180 aa9.7□□□□□ -0.86
SMAD9-202ENST00000379826 FOXD3Q9UJU5 478 aaPredicted RBP9.7□□□□□ -0.86
SMAD9-202ENST00000379826 ZNF729A6NN14 1252 aaPredicted RBP9.7□□□□□ -0.86
SMAD9-202ENST00000379826 NDUFB4O95168 129 aa9.7□□□□□ -0.86
SMAD9-202ENST00000379826 PYY3Q5JQD4 70 aa9.7□□□□□ -0.86
SMAD9-202ENST00000379826 OR1L1Q8NH94 360 aa9.7□□□□□ -0.86
SMAD9-202ENST00000379826 R3HDM4Q96D70 268 aa9.7□□□□□ -0.86
SMAD9-202ENST00000379826 TMEM56Q96MV1 263 aa9.7□□□□□ -0.86
SMAD9-202ENST00000379826 PARLQ9H300 379 aa9.7□□□□□ -0.86
SMAD9-202ENST00000379826 CHODLQ9H9P2 273 aa9.7□□□□□ -0.86
SMAD9-202ENST00000379826 CBLN4Q9NTU7 201 aa9.7□□□□□ -0.86
SMAD9-202ENST00000379826 TMEM56-RWDD3S4R434 201 aa9.7□□□□□ -0.86
SMAD9-202ENST00000379826 SNRPCP09234 159 aaKnown RBP9.7□□□□□ -0.86
SMAD9-202ENST00000379826 ZNF25P17030 456 aaPredicted RBP9.7□□□□□ -0.86
SMAD9-202ENST00000379826 TCL1AP56279 114 aa9.7□□□□□ -0.86
SMAD9-202ENST00000379826 OR2J1Q9GZK6 312 aa9.7□□□□□ -0.86
SMAD9-202ENST00000379826 TRAV34A0A0B4J273 112 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 CELA3AP09093 270 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 HOXA6P31267 233 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 CNN1P51911 297 aaKnown RBP9.69□□□□□ -0.86
SMAD9-202ENST00000379826 REC114Q7Z4M0 266 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 TGIF2LXQ8IUE1 241 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 ZIC4Q8N9L1 334 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 OR2M7Q8NG81 312 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 MED12Q93074 2177 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 PHF3Q92576 2039 aaKnown RBP9.69□□□□□ -0.86
SMAD9-202ENST00000379826 A0A087WWC5 75 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 SLC31A2O15432 143 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 GNG10P50151 68 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 SUMO1P63165 101 aaKnown RBP9.69□□□□□ -0.86
SMAD9-202ENST00000379826 TFF3Q07654 80 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 PRR27Q6MZM9 219 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 Q8IYB0 196 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 OR1L6Q8NGR2 347 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 ANAPC10Q9UM13 185 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 ZNF883P0CG24 379 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 ZNF826PQ6ZT77 177 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 OR2Z1Q8NG97 314 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 TNFRSF19Q9NS68 423 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 NBL1P41271 181 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 SERF2P84101 59 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 RPEL1Q2QD12 228 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 TMEM183AQ8IXX5 376 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 SLC35D1Q9NTN3 355 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 M0R143 59 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 SCGB2A1O75556 95 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 ATP6V1FQ16864 119 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 ELOVL1Q9BW60 279 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 DDA1Q9BW61 102 aa9.69□□□□□ -0.86
SMAD9-202ENST00000379826 WDR61Q9GZS3 305 aaKnown RBP9.69□□□□□ -0.86
SMAD9-202ENST00000379826 GRIFINA4D1Z8 144 aa9.68□□□□□ -0.86
SMAD9-202ENST00000379826 KDF1Q8NAX2 398 aaPredicted RBP9.68□□□□□ -0.86
SMAD9-202ENST00000379826 NOL4LQ96MY1 436 aaPredicted RBP9.68□□□□□ -0.86
SMAD9-202ENST00000379826 TBX15Q96SF7 602 aa9.68□□□□□ -0.86
SMAD9-202ENST00000379826 SDF2L1Q9HCN8 221 aa9.68□□□□□ -0.86
SMAD9-202ENST00000379826 NAT8BQ9UHF3 227 aa9.68□□□□□ -0.86
SMAD9-202ENST00000379826 PAM16Q9Y3D7 125 aa9.68□□□□□ -0.86
SMAD9-202ENST00000379826 J3QT63 122 aa9.68□□□□□ -0.86
SMAD9-202ENST00000379826 S1PR2O95136 353 aa9.68□□□□□ -0.86
SMAD9-202ENST00000379826 CD3EP07766 207 aa9.68□□□□□ -0.86
SMAD9-202ENST00000379826 CRYGSP22914 178 aa9.68□□□□□ -0.86
SMAD9-202ENST00000379826 DENND4AQ7Z401 1863 aa9.68□□□□□ -0.86
SMAD9-202ENST00000379826 HIST3H2BBQ8N257 126 aa9.68□□□□□ -0.86
SMAD9-202ENST00000379826 CCKARP32238 428 aa9.68□□□□□ -0.86
SMAD9-202ENST00000379826 CDPF1Q6NVV7 123 aa9.68□□□□□ -0.86
SMAD9-202ENST00000379826 CLEC2AQ6UVW9 174 aa9.68□□□□□ -0.86
SMAD9-202ENST00000379826 LINC00596Q86U02 117 aa9.68□□□□□ -0.86
SMAD9-202ENST00000379826 SLC25A40Q8TBP6 338 aa9.68□□□□□ -0.86
SMAD9-202ENST00000379826 TTTY12Q9BZ98 90 aa9.68□□□□□ -0.86
SMAD9-202ENST00000379826 PRDM14Q9GZV8 571 aa9.68□□□□□ -0.86
SMAD9-202ENST00000379826 KLF2Q9Y5W3 355 aaPredicted RBP9.68□□□□□ -0.86
SMAD9-202ENST00000379826 UMODP07911 640 aa9.68□□□□□ -0.86
SMAD9-202ENST00000379826 CD55P08174 381 aa9.68□□□□□ -0.86
SMAD9-202ENST00000379826 RAB4AP20338 218 aa9.68□□□□□ -0.86
SMAD9-202ENST00000379826 UCP1P25874 307 aa9.68□□□□□ -0.86
SMAD9-202ENST00000379826 RNPS1Q15287 305 aaKnown RBP9.68□□□□□ -0.86
SMAD9-202ENST00000379826 VN1R17PQ8TDU5 208 aa9.68□□□□□ -0.86
SMAD9-202ENST00000379826 LTBP2Q14767 1821 aa9.68□□□□□ -0.86
SMAD9-202ENST00000379826 TFF1P04155 84 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 CTSSP25774 331 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 IER3P46695 156 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 SLC35B1P78383 322 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 C21orf62-AS1Q17RA5 79 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 ZNF439Q8NDP4 499 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 P2RX4Q99571 388 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 ZNF586Q9NXT0 402 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 IGHV3OR15-7A0A075B7D8 119 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 OOEPA6NGQ2 149 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 TNFRSF9Q07011 255 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 HIST3H3Q16695 136 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 SMIM21Q3B7S5 101 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 RBMXL3Q8N7X1 1067 aaKnown RBP9.67□□□□□ -0.86
SMAD9-202ENST00000379826 OR4X1Q8NH49 305 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms