RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 OR10G9Q8NGN4 311 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 OR10G7Q8NGN6 311 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 C16orf52Q8NHV5 167 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 ARHGAP5-AS1Q96IT6 56 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 ADTRPQ96IZ2 230 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 GFI1Q99684 422 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 RBM24Q9BX46 236 aaKnown RBP10.18□□□□□ -0.78
NPHP4-202ENST00000378161 CHRNA10Q9GZZ6 450 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 TDRD15B5MCY1 1934 aaKnown RBP10.18□□□□□ -0.78
NPHP4-202ENST00000378161 CTXND1A0A1B0GTU2 59 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 ZNF732B4DXR9 585 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 SIVA1O15304 175 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 CELA3AP09093 270 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 GRB2P62993 217 aaKnown RBP10.18□□□□□ -0.78
NPHP4-202ENST00000378161 LINC00346Q8IVM7 164 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 OR10X1Q8NGY0 326 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 SARAFQ96BY9 339 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 BORCS8Q96FH0 119 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 YPEL4Q96NS1 127 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 MS4A5Q9H3V2 200 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 SAP30LQ9HAJ7 183 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 MBNL3Q9NUK0 354 aaKnown RBP10.18□□□□□ -0.78
NPHP4-202ENST00000378161 ZNF716A6NP11 495 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 GCSHP23434 173 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 LYRM7Q5U5X0 104 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 DOLPP1Q86YN1 238 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 SPACA5Q96QH8 159 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 RAB40CQ96S21 281 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 COA3Q9Y2R0 106 aaPredicted RBP10.17□□□□□ -0.78
NPHP4-202ENST00000378161 J3QRE1 110 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 DNPH1O43598 174 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 LEPROTL1O95214 131 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 IAPPP10997 89 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 OR13C6PQ8NH95 151 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 GALMQ96C23 342 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 RARRES3Q9UL19 164 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 TRBV5-7A0A0A0MS05 114 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 LOC102725191A0A1B0GVB3 256 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 LINC01553A4QN01 128 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 CER1O95813 267 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 TYMSP04818 313 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 OR5AL1P0C617 328 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 TAS2R45P59539 299 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 CEACAM16Q2WEN9 425 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 OTPQ5XKR4 325 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 EAF1Q96JC9 268 aaPredicted RBP10.17□□□□□ -0.78
NPHP4-202ENST00000378161 TRIB1Q96RU8 372 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 FAM173AQ9BQD7 235 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 KLHDC2Q9Y2U9 406 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 HEATR5AQ86XA9 2040 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 TRPM6Q9BX84 2022 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 A1L4Q6 167 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 PSMB11A5LHX3 300 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 GAGE12JA6NER3 117 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 CHST1O43916 411 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 GAGE7O76087 117 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 TIAF1O95411 115 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 GAGE12FP0CL80 117 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 GAGE12GP0CL81 117 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 GAGE12IP0CL82 117 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 CT45A6P0DMU7 189 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 CT45A5P0DMU8 189 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 CT45A7P0DMV0 189 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 GAGE4Q13068 117 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 CT45A1Q5HYN5 189 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 CDCP2Q5VXM1 449 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 CT45A3Q8NHU0 189 aa10.17□□□□□ -0.78
NPHP4-202ENST00000378161 ANK1P16157 1881 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 C3orf80F5H4A9 247 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 H0Y8X5 98 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 TAX1BP3O14907 124 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 SNAI2O43623 268 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 SSTR5P35346 364 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 ZNF133P52736 654 aaPredicted RBP10.16□□□□□ -0.78
NPHP4-202ENST00000378161 GAGE2BQ13066 116 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 HES1Q14469 280 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 GAGE2EQ4V326 116 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 BVES-AS1Q5T3Y7 98 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 SAMD5Q5TGI4 173 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 TSPO2Q5TGU0 170 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 ZNF519Q8TB69 540 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 GAGE2DQ9UEU5 116 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 MRPS18BQ9Y676 258 aaKnown RBP10.16□□□□□ -0.78
NPHP4-202ENST00000378161 TRAV9-1A0A075B6T8 112 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 TEX48A0A1B0GUV7 120 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 CRYAAP02489 173 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 C5orf47Q569G3 176 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 SPSB3Q6PJ21 355 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 VN1R4Q7Z5H5 301 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 CCL4L1Q8NHW4 92 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 APOBEC4Q8WW27 367 aaKnown RBP10.16□□□□□ -0.78
NPHP4-202ENST00000378161 RAB1CQ92928 201 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 C6orf106Q9H6K1 298 aaPredicted RBP10.16□□□□□ -0.78
NPHP4-202ENST00000378161 MED29Q9NX70 200 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 RALGAPA2Q2PPJ7 1873 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 MYO16Q9Y6X6 1858 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 LCTP09848 1927 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 NKX2-8O15522 239 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 NDUFB4O95168 129 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 GCSAMLQ5JQS6 135 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms