RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 FSCN3Q9NQT6 498 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 FZR1Q9UM11 496 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 KIF26BQ2KJY2 2108 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 SIGLEC5O15389 551 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 PGLYRP1O75594 196 aaPredicted RBP7.24□□□□□ -1.25
VPS36-201ENST00000378060 SCTP09683 121 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 TMEM187Q14656 261 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 C11orf42Q8N5U0 333 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 OR1K1Q8NGR3 316 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 LSM10Q969L4 123 aaKnown RBP7.24□□□□□ -1.25
VPS36-201ENST00000378060 GALNT14Q96FL9 552 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 MS4A3Q96HJ5 214 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 ZNF552Q9H707 407 aaPredicted RBP7.24□□□□□ -1.25
VPS36-201ENST00000378060 CLN8Q9UBY8 286 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 TRAV39A0A0B4J263 110 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 MGST3O14880 152 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 SMIM17P0DL12 118 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 ZNF25P17030 456 aaPredicted RBP7.24□□□□□ -1.25
VPS36-201ENST00000378060 PPP1CCP36873 323 aaKnown RBP7.24□□□□□ -1.25
VPS36-201ENST00000378060 GFRALQ6UXV0 394 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 TBX15Q96SF7 602 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 CISD1Q9NZ45 108 aaKnown RBP7.24□□□□□ -1.25
VPS36-201ENST00000378060 DMRT1Q9Y5R6 373 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 H0YL77 283 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 J3QR06 171 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 COL8A1P27658 744 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 Q56UQ5 140 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 COL5A1-AS1Q5SY13 56 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 C10orf128Q5T292 105 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 MRPL54Q6P161 138 aaKnown RBP7.23□□□□□ -1.25
VPS36-201ENST00000378060 SELENOHQ8IZQ5 122 aaKnown RBP7.23□□□□□ -1.25
VPS36-201ENST00000378060 OR1P1Q8NH06 330 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 OR4C12Q96R67 309 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 PSMG3Q9BT73 122 aaPredicted RBP7.23□□□□□ -1.25
VPS36-201ENST00000378060 MAP1LC3CQ9BXW4 147 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 PRDM14Q9GZV8 571 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 CACNA1HO95180 2353 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 TRGV8A0A0C4DH27 118 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 TMEM250H0YL14 139 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 CD99P14209 185 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 BTCP35070 178 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 HIKESHIQ53FT3 197 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 FAM209BQ5JX69 171 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 ZNF343Q6P1L6 599 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 PQLC2Q6ZP29 291 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 BHLHA15Q7RTS1 189 aaPredicted RBP7.23□□□□□ -1.25
VPS36-201ENST00000378060 MDP1Q86V88 176 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 LILRB1Q8NHL6 650 aaPredicted RBP7.23□□□□□ -1.25
VPS36-201ENST00000378060 CCL17Q92583 94 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 GPR146Q96CH1 333 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 FLYWCH2Q96CP2 140 aaKnown RBP7.23□□□□□ -1.25
VPS36-201ENST00000378060 CEP250Q9BV73 2442 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 APCSP02743 223 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 HOXB1P14653 301 aaPredicted RBP7.23□□□□□ -1.25
VPS36-201ENST00000378060 GLIPR1P48060 266 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 SOX8P57073 446 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 SELENOTP62341 195 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 AESQ08117 197 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 COTL1Q14019 142 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 C10orf113Q5VZT2 155 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 NR2C2APQ86WQ0 139 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 C1orf210Q8IVY1 113 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 FGFRL1Q8N441 504 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 OR2J1Q9GZK6 312 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 FBLN5Q9UBX5 448 aa7.23□□□□□ -1.25
VPS36-201ENST00000378060 DIRC3C9JPN6 131 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 RAB29O14966 203 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 FGF5P12034 268 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 DCAF10Q5QP82 559 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 ABLIM2Q6H8Q1 611 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 TGIF2LYQ8IUE0 185 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 TGIF2LXQ8IUE1 241 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 OR4X1Q8NH49 305 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 SMIM8Q96KF7 97 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 HARBI1Q96MB7 349 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 HSPB8Q9UJY1 196 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 PAM16Q9Y3D7 125 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 LAMA5O15230 3695 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 ZFHX2Q9C0A1 2572 aaPredicted RBP7.22□□□□□ -1.25
VPS36-201ENST00000378060 BMPR1BO00238 502 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 EIF3GO75821 320 aaKnown RBP eCLIP7.22□□□□□ -1.25
VPS36-201ENST00000378060 TBX6O95947 436 aaPredicted RBP7.22□□□□□ -1.25
VPS36-201ENST00000378060 IGHV3-13P01766 116 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 IGHV3-7P01780 117 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 DDTP30046 118 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 EFNB1P98172 346 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 TMEM97Q5BJF2 176 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 LYRM7Q5U5X0 104 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 SPNS3Q6ZMD2 512 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 MOGAT3Q86VF5 341 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 OR52L2PQ8NGH6 319 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 OR1B1Q8NGR6 318 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 OR2I1PQ8NGU4 316 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 VN1R17PQ8TDU5 208 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 TM2D1Q9BX74 207 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 PXMP4Q9Y6I8 212 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 LOC105371267A0A1B0GV96 52 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 OR2T8A6NH00 312 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 A8MWL6 223 aa7.22□□□□□ -1.25
VPS36-201ENST00000378060 NDUFB4O95168 129 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms