RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 Q9N2K0 584 aa10.34□□□□□ -0.75
VRK3-202ENST00000377011 C19orf12Q9NSK7 152 aa10.34□□□□□ -0.75
VRK3-202ENST00000377011 TREM2Q9NZC2 230 aa10.34□□□□□ -0.75
VRK3-202ENST00000377011 ZNF581Q9P0T4 197 aa10.34□□□□□ -0.75
VRK3-202ENST00000377011 TRBV6-6A0A0A6YYG2 114 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 BTBD17A6NE02 478 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 UMAD1C9J7I0 102 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 INAFM1C9JVW0 142 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 OR7C1O76099 320 aaPredicted RBP10.33□□□□□ -0.76
VRK3-202ENST00000377011 S100A9P06702 114 aaKnown RBP10.33□□□□□ -0.76
VRK3-202ENST00000377011 CAMLGP49069 296 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 CCL8P80075 99 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 PSG7Q13046 419 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 HABP2Q14520 560 aaPredicted RBP10.33□□□□□ -0.76
VRK3-202ENST00000377011 RHEBQ15382 184 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 GUK1Q16774 197 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 CEACAM21Q3KPI0 293 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 MIDNQ504T8 468 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 Q6ZR03 302 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 CALHM1Q8IU99 346 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 ZDHHC23Q8IYP9 409 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 SLC35G3Q8N808 338 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 AKR1E2Q96JD6 320 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 SMIM3Q9BZL3 60 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 BCL2L14Q9BZR8 327 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 MSL2Q9HCI7 577 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 DCAF16Q9NXF7 216 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 ZDHHC8Q9ULC8 765 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 RCL1Q9Y2P8 373 aaKnown RBP10.33□□□□□ -0.76
VRK3-202ENST00000377011 C5orf52A6NGY3 159 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 UBE2CO00762 179 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 TUSC2O75896 110 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 IGHV3-13P01766 116 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 KLF3P57682 345 aaPredicted RBP10.33□□□□□ -0.76
VRK3-202ENST00000377011 EWSR1Q01844 656 aaKnown RBP eCLIP10.33□□□□□ -0.76
VRK3-202ENST00000377011 BAXQ07812 192 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 PRDX4Q13162 271 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 Q6ZPA2 131 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 OR2C3Q8N628 320 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 ZNF565Q8N9K5 539 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 OR52M1Q8NGK5 317 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 DYRK2Q92630 601 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 HIST1H2BAQ96A08 127 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 MALSU1Q96EH3 234 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 TP53RKQ96S44 253 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 SCRT1Q9BWW7 348 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 HIPK2Q9H2X6 1198 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 WFDC1Q9HC57 220 aa10.33□□□□□ -0.76
VRK3-202ENST00000377011 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.32□□□□□ -0.762e-6■■■■□ 21.2
VRK3-202ENST00000377011 C17orf100A8MU93 164 aa10.32□□□□□ -0.76
VRK3-202ENST00000377011 C9JQL5 133 aa10.32□□□□□ -0.76
VRK3-202ENST00000377011 K7N7A8 449 aa10.32□□□□□ -0.76
VRK3-202ENST00000377011 SPRY3O43610 288 aa10.32□□□□□ -0.76
VRK3-202ENST00000377011 S100A6P06703 90 aa10.32□□□□□ -0.76
VRK3-202ENST00000377011 UCP1P25874 307 aa10.32□□□□□ -0.76
VRK3-202ENST00000377011 GNRHRP30968 328 aa10.32□□□□□ -0.76
VRK3-202ENST00000377011 MAS1LP35410 378 aa10.32□□□□□ -0.76
VRK3-202ENST00000377011 NKX2-1P43699 371 aaPredicted RBP10.32□□□□□ -0.76
VRK3-202ENST00000377011 RPS23P62266 143 aaKnown RBP10.32□□□□□ -0.76
VRK3-202ENST00000377011 MRPL21Q7Z2W9 205 aaKnown RBP10.32□□□□□ -0.76
VRK3-202ENST00000377011 ZNF695Q8IW36 515 aa10.32□□□□□ -0.76
VRK3-202ENST00000377011 OR56B2PQ8NGI1 322 aa10.32□□□□□ -0.76
VRK3-202ENST00000377011 OR5A2Q8NGI9 324 aa10.32□□□□□ -0.76
VRK3-202ENST00000377011 OR11L1Q8NGX0 322 aa10.32□□□□□ -0.76
VRK3-202ENST00000377011 SECTM1Q8WVN6 248 aa10.32□□□□□ -0.76
VRK3-202ENST00000377011 PAPOLGQ9BWT3 736 aaKnown RBP10.32□□□□□ -0.76
VRK3-202ENST00000377011 RAB1BQ9H0U4 201 aa10.32□□□□□ -0.76
VRK3-202ENST00000377011 UNKLQ9H9P5 680 aaKnown RBP10.32□□□□□ -0.76
VRK3-202ENST00000377011 RPS10P5Q9NQ39 176 aa10.32□□□□□ -0.76
VRK3-202ENST00000377011 UBE2J1Q9Y385 318 aaPredicted RBP10.32□□□□□ -0.76
VRK3-202ENST00000377011 FBN1P35555 2871 aaKnown RBP10.32□□□□□ -0.76
VRK3-202ENST00000377011 AGPAT2O15120 278 aa10.31□□□□□ -0.76
VRK3-202ENST00000377011 IGHV1-46P01743 117 aa10.31□□□□□ -0.76
VRK3-202ENST00000377011 SLC25A6P12236 298 aa10.31□□□□□ -0.76
VRK3-202ENST00000377011 VDAC1P21796 283 aa10.31□□□□□ -0.76
VRK3-202ENST00000377011 S100GP29377 79 aa10.31□□□□□ -0.76
VRK3-202ENST00000377011 PDLIM4P50479 330 aa10.31□□□□□ -0.76
VRK3-202ENST00000377011 PPT1P50897 306 aa10.31□□□□□ -0.76
VRK3-202ENST00000377011 OR8G1Q15617 311 aa10.31□□□□□ -0.76
VRK3-202ENST00000377011 TMEM249Q2WGJ8 235 aa10.31□□□□□ -0.76
VRK3-202ENST00000377011 MBNL2Q5VZF2 373 aaKnown RBP10.31□□□□□ -0.76
VRK3-202ENST00000377011 TBC1D26Q86UD7 250 aa10.31□□□□□ -0.76
VRK3-202ENST00000377011 SLC35B3Q9H1N7 401 aa10.31□□□□□ -0.76
VRK3-202ENST00000377011 LYRM2Q9NU23 88 aaPredicted RBP10.31□□□□□ -0.76
VRK3-202ENST00000377011 METTL1Q9UBP6 276 aaKnown RBP10.31□□□□□ -0.76
VRK3-202ENST00000377011 ARHGAP32A7KAX9 2087 aa10.31□□□□□ -0.76
VRK3-202ENST00000377011 IGHV3-64DA0A0J9YX35 117 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 C7orf77A4D0Y5 90 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 OR5B21A6NL26 309 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 H0Y980 276 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 TRAPPC2LH3BP13 241 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 HSPA12AO43301 675 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 PRH1P02810 166 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 IGHV4-31P0DP07 118 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 BCL3P20749 454 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 NPBWR2P48146 333 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 HOXA4Q00056 320 aaPredicted RBP10.3□□□□□ -0.76
VRK3-202ENST00000377011 LOXL1Q08397 574 aaPredicted RBP10.3□□□□□ -0.76
VRK3-202ENST00000377011 ZNF616Q08AN1 781 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 ZNF718Q3SXZ3 478 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms