RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 PPP1R2P9O14990 202 aa15.29■□□□□ 0.04
PTPDC1-202ENST00000375360 RAB4AP20338 218 aa15.29■□□□□ 0.04
PTPDC1-202ENST00000375360 VKORC1L1Q8N0U8 176 aa15.29■□□□□ 0.04
PTPDC1-202ENST00000375360 SPINK4O60575 86 aa15.28■□□□□ 0.04
PTPDC1-202ENST00000375360 H3F3AP84243 136 aa15.28■□□□□ 0.04
PTPDC1-202ENST00000375360 GAMTQ14353 236 aa15.28■□□□□ 0.04
PTPDC1-202ENST00000375360 SSX8Q7RTT4 187 aa15.28■□□□□ 0.04
PTPDC1-202ENST00000375360 GFI1Q99684 422 aa15.28■□□□□ 0.04
PTPDC1-202ENST00000375360 FOXD3Q9UJU5 478 aaPredicted RBP15.28■□□□□ 0.04
PTPDC1-202ENST00000375360 PLXND1Q9Y4D7 1925 aa15.28■□□□□ 0.04
PTPDC1-202ENST00000375360 OR5B3Q8NH48 314 aa15.28■□□□□ 0.04
PTPDC1-202ENST00000375360 SLC35B3Q9H1N7 401 aa15.28■□□□□ 0.04
PTPDC1-202ENST00000375360 A1L4Q6 167 aa15.28■□□□□ 0.04
PTPDC1-202ENST00000375360 ATP6V1FQ16864 119 aa15.28■□□□□ 0.04
PTPDC1-202ENST00000375360 NRN1LQ496H8 165 aa15.28■□□□□ 0.04
PTPDC1-202ENST00000375360 KDF1Q8NAX2 398 aaPredicted RBP15.28■□□□□ 0.04
PTPDC1-202ENST00000375360 GPR146Q96CH1 333 aa15.28■□□□□ 0.04
PTPDC1-202ENST00000375360 LPAR3Q9UBY5 353 aa15.28■□□□□ 0.04
PTPDC1-202ENST00000375360 PRNDQ9UKY0 176 aa15.28■□□□□ 0.04
PTPDC1-202ENST00000375360 CLN5O75503 358 aa15.27■□□□□ 0.04
PTPDC1-202ENST00000375360 RHOBP62745 196 aa15.27■□□□□ 0.04
PTPDC1-202ENST00000375360 SMIM15Q7Z3B0 74 aa15.27■□□□□ 0.04
PTPDC1-202ENST00000375360 FAM216BQ8N7L0 139 aa15.27■□□□□ 0.04
PTPDC1-202ENST00000375360 ERVFC1-1P60608 527 aa15.27■□□□□ 0.04
PTPDC1-202ENST00000375360 OR1L8Q8NGR8 309 aa15.27■□□□□ 0.04
PTPDC1-202ENST00000375360 LINC00052Q96N35 136 aa15.27■□□□□ 0.04
PTPDC1-202ENST00000375360 COA4Q9NYJ1 87 aa15.27■□□□□ 0.04
PTPDC1-202ENST00000375360 THYN1Q9P016 225 aa15.27■□□□□ 0.04
PTPDC1-202ENST00000375360 IGKV3-7A0A075B6H7 116 aa15.27■□□□□ 0.03
PTPDC1-202ENST00000375360 IGHV1-69-2A0A0G2JMI3 117 aa15.27■□□□□ 0.03
PTPDC1-202ENST00000375360 H0Y980 276 aa15.27■□□□□ 0.03
PTPDC1-202ENST00000375360 SPNS3Q6ZMD2 512 aa15.27■□□□□ 0.03
PTPDC1-202ENST00000375360 OR1B1Q8NGR6 318 aa15.27■□□□□ 0.03
PTPDC1-202ENST00000375360 RSG1Q9BU20 258 aa15.27■□□□□ 0.03
PTPDC1-202ENST00000375360 SH2D2AQ9NP31 389 aa15.27■□□□□ 0.03
PTPDC1-202ENST00000375360 H0Y8G0 127 aa15.27■□□□□ 0.03
PTPDC1-202ENST00000375360 HPRT1P00492 218 aa15.27■□□□□ 0.03
PTPDC1-202ENST00000375360 DAOP14920 347 aa15.27■□□□□ 0.03
PTPDC1-202ENST00000375360 HLA-GP17693 338 aa15.27■□□□□ 0.03
PTPDC1-202ENST00000375360 SNRNP40Q96DI7 357 aaKnown RBP15.27■□□□□ 0.03
PTPDC1-202ENST00000375360 FAM122AQ96E09 287 aa15.27■□□□□ 0.03
PTPDC1-202ENST00000375360 MYO18BQ8IUG5 2567 aa15.27■□□□□ 0.03
PTPDC1-202ENST00000375360 ARL16Q0P5N6 197 aa15.26■□□□□ 0.03
PTPDC1-202ENST00000375360 ZNF439Q8NDP4 499 aa15.26■□□□□ 0.03
PTPDC1-202ENST00000375360 ZNF320A2RRD8 509 aa15.26■□□□□ 0.03
PTPDC1-202ENST00000375360 DRAM1Q8N682 238 aa15.26■□□□□ 0.03
PTPDC1-202ENST00000375360 TP53RKQ96S44 253 aa15.26■□□□□ 0.03
PTPDC1-202ENST00000375360 CTDSP1Q9GZU7 261 aa15.26■□□□□ 0.03
PTPDC1-202ENST00000375360 C12orf77C9JDV5 145 aa15.26■□□□□ 0.03
PTPDC1-202ENST00000375360 SRP14P37108 136 aaKnown RBP15.26■□□□□ 0.03
PTPDC1-202ENST00000375360 CNN1P51911 297 aaKnown RBP15.26■□□□□ 0.03
PTPDC1-202ENST00000375360 RNFT1Q5M7Z0 435 aa15.26■□□□□ 0.03
PTPDC1-202ENST00000375360 HCP5Q6MZN7 132 aa15.26■□□□□ 0.03
PTPDC1-202ENST00000375360 PAQR4Q8N4S7 273 aaPredicted RBP15.26■□□□□ 0.03
PTPDC1-202ENST00000375360 OR4P4Q8NGL7 312 aa15.26■□□□□ 0.03
PTPDC1-202ENST00000375360 NABP1Q96AH0 204 aa15.26■□□□□ 0.03
PTPDC1-202ENST00000375360 A0A0B4J293 547 aa15.25■□□□□ 0.03
PTPDC1-202ENST00000375360 J3QW42 95 aa15.25■□□□□ 0.03
PTPDC1-202ENST00000375360 LY86O95711 162 aa15.25■□□□□ 0.03
PTPDC1-202ENST00000375360 SCGB1D1O95968 90 aa15.25■□□□□ 0.03
PTPDC1-202ENST00000375360 C2orf68Q2NKX9 166 aa15.25■□□□□ 0.03
PTPDC1-202ENST00000375360 ETFRF1Q6IPR1 90 aa15.25■□□□□ 0.03
PTPDC1-202ENST00000375360 COMMD1Q8N668 190 aa15.25■□□□□ 0.03
PTPDC1-202ENST00000375360 B3GALNT1O75752 331 aa15.25■□□□□ 0.03
PTPDC1-202ENST00000375360 NUBP1P53384 320 aa15.25■□□□□ 0.03
PTPDC1-202ENST00000375360 OR51B2Q9Y5P1 312 aa15.25■□□□□ 0.03
PTPDC1-202ENST00000375360 GBF1Q92538 1859 aa15.25■□□□□ 0.03
PTPDC1-202ENST00000375360 RAB19A4D1S5 217 aa15.25■□□□□ 0.03
PTPDC1-202ENST00000375360 RBFOX3A6NFN3 312 aa15.25■□□□□ 0.03
PTPDC1-202ENST00000375360 GNG7O60262 68 aa15.25■□□□□ 0.03
PTPDC1-202ENST00000375360 B2MP61769 119 aa15.25■□□□□ 0.03
PTPDC1-202ENST00000375360 FABP9Q0Z7S8 132 aa15.25■□□□□ 0.03
PTPDC1-202ENST00000375360 BATFQ16520 125 aa15.25■□□□□ 0.03
PTPDC1-202ENST00000375360 RNF144BQ7Z419 303 aa15.25■□□□□ 0.03
PTPDC1-202ENST00000375360 MED13Q9UHV7 2174 aa15.25■□□□□ 0.03
PTPDC1-202ENST00000375360 MELTFP08582 738 aa15.25■□□□□ 0.03
PTPDC1-202ENST00000375360 ACP7Q6ZNF0 438 aa15.25■□□□□ 0.03
PTPDC1-202ENST00000375360 FAM24BQ8N5W8 94 aa15.25■□□□□ 0.03
PTPDC1-202ENST00000375360 ZNF645Q8N7E2 425 aa15.25■□□□□ 0.03
PTPDC1-202ENST00000375360 RASL11BQ9BPW5 248 aa15.25■□□□□ 0.03
PTPDC1-202ENST00000375360 SLC45A2Q9UMX9 530 aa15.25■□□□□ 0.03
PTPDC1-202ENST00000375360 LEUTXA8MZ59 168 aa15.24■□□□□ 0.03
PTPDC1-202ENST00000375360 SLC25A17O43808 307 aa15.24■□□□□ 0.03
PTPDC1-202ENST00000375360 S1PR2O95136 353 aa15.24■□□□□ 0.03
PTPDC1-202ENST00000375360 ARG1P05089 322 aa15.24■□□□□ 0.03
PTPDC1-202ENST00000375360 SLC25A5P05141 298 aaKnown RBP15.24■□□□□ 0.03
PTPDC1-202ENST00000375360 TMEM65Q6PI78 240 aa15.24■□□□□ 0.03
PTPDC1-202ENST00000375360 CLEC2AQ6UVW9 174 aa15.24■□□□□ 0.03
PTPDC1-202ENST00000375360 UQCC3Q6UW78 93 aa15.24■□□□□ 0.03
PTPDC1-202ENST00000375360 C1orf162Q8NEQ5 155 aaPredicted RBP15.24■□□□□ 0.03
PTPDC1-202ENST00000375360 DENND4CQ5VZ89 1909 aa15.24■□□□□ 0.03
PTPDC1-202ENST00000375360 SIGLEC5O15389 551 aa15.24■□□□□ 0.03
PTPDC1-202ENST00000375360 SS18L1O75177 396 aaPredicted RBP15.24■□□□□ 0.03
PTPDC1-202ENST00000375360 UBE2L3P68036 154 aaKnown RBP15.24■□□□□ 0.03
PTPDC1-202ENST00000375360 ECSCRQ19T08 205 aa15.24■□□□□ 0.03
PTPDC1-202ENST00000375360 TM2D1Q9BX74 207 aa15.24■□□□□ 0.03
PTPDC1-202ENST00000375360 MS4A7Q9GZW8 240 aaPredicted RBP15.24■□□□□ 0.03
PTPDC1-202ENST00000375360 ELOVL5Q9NYP7 299 aa15.24■□□□□ 0.03
PTPDC1-202ENST00000375360 C1RLQ9NZP8 487 aa15.24■□□□□ 0.03
PTPDC1-202ENST00000375360 PPIAL4CA0A0B4J2A2 164 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms